Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00534 ATGGCGGAAAGTTTAGAAGAGGTCTACCTCCATGGCGATCTCGACCTTAAAATCATTGCCGCCGTTCATTTGCCTAACATGGACATTGTATCTGAGCATCTTCGTCGTTGCTTCACAGCCTGTGGCACTGTCAATTACTCTGCCATTAAATCCGTCGCAACCAAATCCCGTTCTGCTGCTGGTGAGGAGAAAGCCCACCATAGCCGTGGAAAAATTATCACCAGTGATCCATATGTTACCGTCCGGGTTCCTCAAGCCACCGTCGCTCGGACTCGGGTCATAAAAAATTCCCAGAATCCCCATTGGAACGAGCATTTCGTTATCCCTCTTGCACAGAAGATGGCCGAGTTGGAATTTCAGGTGAAAGACGATGATGTCTTTGGGGCTGAAGTTATGGGGACGGTCAAAATCCCTGCTCAGGACATTGCTTCCGGTAAGATAATTAGTGGGTGGTATACGGTGATTGGCTCAAATGGCAAGCCACCGAAGCCTGACACTGCACTTCGAATCGAAATGAAGTTCACCTCAGTTGAAGAAAATCCGATATATCGACATGGCATTGCTGGAGATCCCGAGCATAGGGGCGTGCAGCACACTTATTTTCCTGTCAGGAAAGGGAGCTCCATGAGATTGTACCAAGATGCTCATGTGCCTGATGGGCTACTGCCGCAGATTGAATTGGATGAAGGGAATGTTTATAGACAAGAGAAATGTTGGGAGGATATCTGCTATGCTATATCAGAGGCTCATCATATGATTTATATCGTCGGTTGGTCCGTTTTTCATAAGGTGAAGCTGGTTAGAGAGCCAACCAGGCCGTTACCACGAGGTGGAGACTTGACTCTTGGTGAACTCCTGAAATACAAATCAGAAGAGGGTGTCAGAGTTCTGATGATGATTTGGGATGACAAGACTTCTCATGATAAGTTGTTCATCAACACGGAAGGATTGATGCAGACACATGACGAGGAAACCAGAAATTTTTTTAAACATTCTTCTGTGATCTGTGTGCTCTCACCTCGCTATCCGAGCGGCAAGCTAAGCTATGTGAAACAAAAGGTTGTAGGAACTGTCTTCACACACCATCAAAAGTGTGTCCTTGTTGATACACAGGGATATGGTAATAATAGAAAGATAACTGCTTTTCTTGGAGGTCTTGATCTCTGCGATGGTCGTTATGATACACCTGAGCATCGATTGTTTCATGACCTTGACACAGTATTTAAGGATGATTTTCATAATCCTACAATTCCTCCTGGAGCCAAAGCACCAAGGCAACCATGGCATGATTTGCACTGTAGGCTTGATGGACCAGCTGCTTATGACTTGCTTATAAACTTTGAGCAACGTTGGAACAGAGCCACAAGATGGACAGAGTTTGGACTACGGTGCAGGAGAATTACTCACTGGCATGATGCTTTGATAAAGATAGAGCGTATTTCGTGGATACTAAGCCCTCAAGTAATTCTCTTAGAAGACGGTTCGATAAAAGTTCCAGAAGATGACCCAAAAGTATATGTTTCAAAGGAAGAAGATCCTGAAAATTGGCATGTTCAGATATTTCGATCCATTGACTCTGGTTCAGTTAAAGGATTTCCAAAAGATGTCCATCTCGCCGAGTCACTGAACCTTGTTTGTGCTAAAAACCTGGCTATTGAGAAAAGCATTGAAATGGCATATATCCAAGCTATCAGATCGGCGCAGCATTTTATTTATATCGAAAATCAGTACTTTATTGGATCATCATATGGATGGCCAGGATATAAAAATGCCGGGGCTGATAATCTCATTCCCATGGAGTTGGCCCTTAAGATTGCGAGCAAAATAAGAGCCAAGGAAAGGTTTGTTGTATATATCGTCATACCAATGTGGCCTGAGGGAGATCCAAACAGCGGTCCCATGCAAGAGATCCTTTATTGGCAGGGACAAACAATGCAAATGATGTATGACATTGTTGCAAGTGAATTGAAGTCATCAGGGCAACCAGATTTGCACCCTCAAGACTTCCTAAATTTTTACTGCCTTGGAAAACAAGAAGAAATTCCCGAGAATGGGCCAACCACTGATGATCCAACGGCGTGTAATTCACTAAAAAATCGACGGTTTATGATTTACGTGCATGCCAAGGGGATGATAGTAGATGATGAATACGTAATTATTGGGTCTGCAAATATTAACCAAAGATCTATGGCTGGAACAAAGGACACAGAGATAGCCACGGGCGCATATCAGCCGCATCATACGTGGGTGAAGAAAAAGAAGCATCCACACGGTCAGATTTATGGATACAGAATGTCGTTGTGGAGTGAGCATCTTGGAATGCTAAATCCATGTTTTGAGGAGCCAGAAACTTTGGAATGTGTCAGAAAAATCAATGGGATTGCTGAGGATAACTGGAACAGATTTGCAGACAATGAATTCCGGACGTTGCAAGGCCACCTTCTCAGGTATCCGGTGCTCGTGGACGATGATGGGAAAATCAACCCTCTGCCAGGACATGAAAACTTCCCTGATGTAGGGGGGAAGATAATAGGTTCTCATTCAGCTGCAATTCCTGATGTTTTGACCACATAG 2574 44.06 MAESLEEVYLHGDLDLKIIAAVHLPNMDIVSEHLRRCFTACGTVNYSAIKSVATKSRSAAGEEKAHHSRGKIITSDPYVTVRVPQATVARTRVIKNSQNPHWNEHFVIPLAQKMAELEFQVKDDDVFGAEVMGTVKIPAQDIASGKIISGWYTVIGSNGKPPKPDTALRIEMKFTSVEENPIYRHGIAGDPEHRGVQHTYFPVRKGSSMRLYQDAHVPDGLLPQIELDEGNVYRQEKCWEDICYAISEAHHMIYIVGWSVFHKVKLVREPTRPLPRGGDLTLGELLKYKSEEGVRVLMMIWDDKTSHDKLFINTEGLMQTHDEETRNFFKHSSVICVLSPRYPSGKLSYVKQKVVGTVFTHHQKCVLVDTQGYGNNRKITAFLGGLDLCDGRYDTPEHRLFHDLDTVFKDDFHNPTIPPGAKAPRQPWHDLHCRLDGPAAYDLLINFEQRWNRATRWTEFGLRCRRITHWHDALIKIERISWILSPQVILLEDGSIKVPEDDPKVYVSKEEDPENWHVQIFRSIDSGSVKGFPKDVHLAESLNLVCAKNLAIEKSIEMAYIQAIRSAQHFIYIENQYFIGSSYGWPGYKNAGADNLIPMELALKIASKIRAKERFVVYIVIPMWPEGDPNSGPMQEILYWQGQTMQMMYDIVASELKSSGQPDLHPQDFLNFYCLGKQEEIPENGPTTDDPTACNSLKNRRFMIYVHAKGMIVDDEYVIIGSANINQRSMAGTKDTEIATGAYQPHHTWVKKKKHPHGQIYGYRMSLWSEHLGMLNPCFEEPETLECVRKINGIAEDNWNRFADNEFRTLQGHLLRYPVLVDDDGKINPLPGHENFPDVGGKIIGSHSAAIPDVLTT* 858
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3209316 3215239 - Chy2G028010.1 Chy02g00534 219982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00534 857 SUPERFAMILY Phospholipase D/nuclease 198 461 - -
Chy02g00534 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 702 729 IPR001736 GO:0003824
Chy02g00534 857 ProSiteProfiles C2 domain profile. 1 152 IPR000008 -
Chy02g00534 857 Gene3D Endonuclease Chain A 529 748 - -
Chy02g00534 857 PANTHER PHOSPHOLIPASE D 5 857 IPR015679 -
Chy02g00534 857 SMART pld_4 702 729 IPR001736 GO:0003824
Chy02g00534 857 SMART pld_4 357 392 IPR001736 GO:0003824
Chy02g00534 857 SUPERFAMILY Phospholipase D/nuclease 554 787 - -
Chy02g00534 857 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 10 175 IPR035892 -
Chy02g00534 857 Pfam C2 domain 12 153 IPR000008 -
Chy02g00534 857 Gene3D C2 domain 11 183 IPR035892 -
Chy02g00534 857 PIRSF PLD_plant 1 857 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Chy02g00534 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 357 392 IPR001736 GO:0003824
Chy02g00534 857 Pfam Phospholipase D C terminal 778 846 IPR024632 -
Chy02g00534 857 PANTHER PHOSPHOLIPASE D DELTA 5 857 - -
Chy02g00534 857 Pfam Phospholipase D Active site motif 357 392 IPR001736 GO:0003824
Chy02g00534 857 Pfam Phospholipase D Active site motif 703 729 IPR001736 GO:0003824
Chy02g00534 857 CDD C2_plant_PLD 8 175 - -
Chy02g00534 857 Gene3D Endonuclease Chain A 226 465 - -
Chy02g00534 857 SMART C2_3c 13 151 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00534 Chy-Chr2:3209316 Chy03g01048 Chy-Chr3:13966886 0 dispersed
Chy02g00534 Chy-Chr2:3209316 Chy03g01122 Chy-Chr3:14515013 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00534 K01115 - csv:101217251 1771.9