Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00591 ATGAGGATACTTTGTGATTCTTGTGAAAGTGCTCCAGCTACTTTGTTTTGTGCTGCTGATGAGGCCGCTCTTTGTGCAATTTGTGATACAAAGGTACACATGTGCAATAAGCTTGCGAGCCGTCATGTAAGGGTTGGGCTTGCAAATCCAAGTGAAGTTCCTCGCTGTGATATTTGTGAAAATGCACCAGCTTTCTTTTACTGTGAGATAGATGGCAGTTCCTTGTGTTTACAATGCGACGTGATCGTTCATGTTGGTGGTAAAAGAATGCACAAGAGATATCTCCGTCTGAGGCAGAGAGTTGAGTTTCCAGGGGATAAACAAAATGATGTGAAGGACCTAAATGTAAAACCGACGGAACAGGTTGAGAAAGTAAAAAGCCAAAATGAAGAAAGGGGTGAGAATGAAAAGCATGAAGAGTTGAGGGTGTCAGGTGTTACAAAAGATTATTCAAATGGAGATGGGCATTCCAAGCGGCCTAATAAAGTGATTGATTTAAACATGTAG 507 41.62 MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICENAPAFFYCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTEQVEKVKSQNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM* 169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3597169 3598189 + Chy2G028580.1 Chy02g00591 220039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00591 168 CDD Bbox1_BBX-like 4 47 - -
Chy02g00591 168 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 168 - -
Chy02g00591 168 Gene3D Classic Zinc Finger 1 95 - -
Chy02g00591 168 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Chy02g00591 168 Pfam B-box zinc finger 4 42 IPR000315 GO:0008270
Chy02g00591 168 Pfam B-box zinc finger 52 85 IPR000315 GO:0008270
Chy02g00591 168 SMART bboxneu5 4 47 IPR000315 GO:0008270
Chy02g00591 168 SMART bboxneu5 51 96 IPR000315 GO:0008270
Chy02g00591 168 MobiDBLite consensus disorder prediction 107 168 - -
Chy02g00591 168 ProSiteProfiles Zinc finger B-box type profile. 51 97 IPR000315 GO:0008270
Chy02g00591 168 MobiDBLite consensus disorder prediction 107 145 - -
Chy02g00591 168 PANTHER B-BOX ZINC FINGER PROTEIN 19 1 168 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00591 Chy-Chr2:3597169 Chy11g01928 Chy-Chr11:25396317 5.20E-26 dispersed
Chy02g00591 Chy-Chr2:3597169 Chy03g01411 Chy-Chr3:16842241 4.68E-23 wgd
Chy02g00591 Chy-Chr2:3597169 Chy07g01229 Chy-Chr7:17084276 5.94E-69 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17457 PF00643 zf-B_box 2.80E-06 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00591 - - csv:101206016 347.821