Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00633 ATGGATAATCTCTCACATTCTCGTCTCCCTAACAGGGGTTCTACCTCGCTTTCTAAGAAAATCTGTAATGGTAGTAATGGTGGTGGTCCTTTTGTTGCTCAAACTATCTACGACGACGTTTATGGCGGTCCTCCTAAGTTTGGAGTTTCTGCTTTGTCTCCTCGTTTTGAAGACTACGGTGAGATTTTCGGCAGCTTTCACGCGCTACGTGCTTCCTCGATTCCCATTCTTGATCTTCCTGCTGTTAATGAATCTGAGGTTTTCTTTGACGCTCGGAGCTCTGCATTCGACTATGCGGAGGTTTTTGGCGGGTTTGATGGTCTGGATTTTGCGATTTCCTATGATGAATTGGTTGGGCTTTCTAAAGGCGTTGATGATGGCTCTTCCGATGAAGCTTGGACTCCAGCAGGAACTGAATCTCTGTCAGACTGTTCGGATCATTCTGGAAATTCTCATTGTATGTCAAATGGAGACTCTAAACAGTCGTTTGAAGAAAGTACTGAGTTTTGCATATCATATAACAAGGTTGACCGAGAAAGCAATGGAAATATATCAAATGGGAAGATACACGTTACTCAGTTGGAGATGCTTCCTGGATTCTCATATCTGGTTGACGAAGCAAATCCCTCGCCAAAGGCAACAGATGATGATCCGTCACTGCAGACCAACGATGATAACTATCTCAATATAGATTTTGATACAGGAAAGGTGAAGGGCAAACATCCAAGGAACACTATGCCACCCCTAGTGGACAGTAATGACCCCGGACCATTATTTGAGGATAACCCTATTTCTCAAAATGGATATGGTAGAGGTGTTTGTCGTTCTCACGAGGATTTCATAACTGTATCTGAAATAAGCCTTAGAACTGAACCGTCACAAGTGCCACCACCCGCTCGACCTCCTCCCAAGTTTGCTACCAAAAAGAGGGACTACGCTAGAAGGACTTTGAGTTGTGGGGAAGCTGCTTCTGAATTAATTTCGGACGATCATACTCTTCCTTCATTTGATGTAGAGGTAGATGCCAGCTCATCTGCAGCGGCCTCTGCTGCAGCTATGAAAGAAGCAATGGAAAAAGCTCAAGCACAGTTACAAAATGCAAAAGATTTGTGGAAGAGAAAGAAGGAAGGGGTCCATGGAAGATTGAGACTGGACTTGAAAAATGATATCAGAGAAAAGGATGGGAAATTGTCGAAGATTCCAAACCGATTTAGGACTTTGGCCAACGAAAGCGAGCTGGGTGCTGGGGAAATTCATGGCCATGAGATGAATTTGTCTGCCAGAGAGGAGAGGCAAAAGGATGGGAAGGCAACTGAAGTTTGTTCAACACACTATGGAGGAGAGGAACTCTTAACAGAGGCTGAAAAGACCCTACCAATTAGAAGTGGGAGTAGATTTTTTGTGTCGGAGAACCATGATTGCTGCAACAAATGGAAAGACGCCACAGAGTTTTTTGAATTGGCAAGAGCAGATATATCCGGTAAGGAATTTGAGTCAGTGAACAATGATGCAATTTCTAACTTTGTGACTGCACAAATGGGTGTAGAGATCAACAATGCATGGGAGAATGATAAAAATCAAGACAAGAAAGTAAACGCATTCCATACAACTCACATTCTTAATGAGGCAGTGAAGAATTTGGAGAATATGGTTCATGGAAAGAAGGAAGATAAGATAAAACTGAAGCCAAATAAAAAAGAAACTAGGCAAAAAGAGCAGGTGAAATTAAAAATTCACCAAAATTTTTGTGATCTTGAAGCAAATGATATGAAGTTTGGAGTTGCTCAAGGGTTTATGGAAATAAAAAAGCAAATGGGTTGTGCTAGTGATCCAGAGAAACGTGAAAAGCCTATGGAATTTAGACAATTGGACAGTGAGCTAAAGGTTGAGCACCCACTTGTTTCACCAAGGGATATTGAACAAGAAAAGAAAACGGTTGTTGAAAGAAAGAAAAATGGATATAGTCTGAAGGATTCTCATATAACAGAAAACAATGCAAATAAAATGGAAGCCATTGATAATGAGAAAAGAGCGATGTTCCCAGAGGCTTCTGAAAGGGAAAAAGTTGAGCAAAAAATGAGGATGTTCCTCGAGCGACCAGAAGATAAGAAAAGACTGAATTTGGTTCTTGAGGATGACAACTTTATGGGACAGATGGCTCGTGAAAGACAACTGGAAGGAGTTTGTGACATGGAAGATCATGGGGAAAAGGAAAAAGAGGCTGCCAAAGTTGGAGTAAGTGAGAGACCTGAGTTAGCTCATGAGATAGAAGATGACAATAAATGGGCACAGGATTTTCAGTACAGAGAAGTATGTGAAAAAGGAGTCGATGATTCATTTCAGCATTTGAACATTGGAGAGATACCAAGAGATGTGGGTCAGTGTAAAGTGACTTCGATGCTGGTTAAAGATTCACAAGATAGTACAGATCTCAATGGTACAAGTTCGGAGCATGATGGATTAAAGAGATTGGACGACAAACACAAAGTAAATTCAACAATAGAATCTCAAGTGCATGATTTGGGTATATCTGCTGCTGCACTTCAAATAAAAGATGACAAAGACCACTTACCCAGTGAATTAGCATGTCCAAGAGGAATGTCCGAAGAATTCTCTATTGTAGATGAAAGTGGAGAGCGAAAGACTACAGTTATAGTTAATGAAAATCTGGAATTTAACAAAAATTCTTGTGTGCCGGGTGTGTGCCAGCCAGAGGTAGAACATCATAATGTTCCAGTTGAAATGGAAGATGCAGATATACAACTTTCCTTCGATGAATTGATTAAAAGAGCAGCCAAAGAAACACAATTTCAATCCGAAATTGAGCATACACAATTAGAGCCAACTAACTCGGAAGACGGACTTTCATCTGAAAACTCAACAAGCATGGACGAGGGAGAGAACATAGACAAGCTGGAAGATATGAAATCATCTCTTCCTCTGGATAGAAGTGATGAGAAGGCAGGCCAGGCAGGTGGTTGCATTGAAGGGTCCGTAGGGAGAAAGAAGGTTGTTACCGGAATGGGCTTTGTTCCTGAACATCCAGAAAGTAACTTGTCCTGTTGTATGGAAGATAAAGGGAAGTCCTCTGACCAGGTTGAAGATAAGGGACAGAAAGCGCCAGTTCAGGGGGTCAATGTAAGGGCTGAGAAAGGAAGTGGATTGAGGTCAACGTGGCAAAATATTTCAGAAAGGACACGGAAGAGTGGGGAATTCTCCTGTGAGGTCAATGCAAATCATGCTCCTGAAAGAAAGGAAAAGATTGTAATCCAGAACCATACATCTAAAGGAAAAGAGAGTGAGAGAGCAAGGAGTGAAGCAGAATCTGAGAATCTTCGAAAATTGGAAGAAGAGAGGGAAAGGGAGAGAGAGAGAGAGAAGGATAGAATGCCTATTGACAGGATTTCTCTTGAACCACGAGATAGAGCAGGTGCCGAAGCTCGTGAAAGGGTAGAAAGGGCTGCTCTGGAGAGGATGACTGCCGAAGCCCGACAAAGAGCATTGGCTGATGCACGTGAAAGATTGGAAAAGGCATGTGCAGAGGCAAGAGAAAATTCATTGGCTGGAAAGGCAGCAACTATGGAGGCAAGGGTAAAGGCAGAGCGTGCAGCTGTAGAAAGAGCAACTGCAGAGGCCAGGGAGCGAGCTGCGGAGAAAGCCAAGTCTGACAAGACTTCTTTTGGGGCAAGAGAGAGAATGGAAAGATCTGTTTCTGACAAATTCTCTGCTTCTTCCAGAAATAATGAAATGAGACAGAAGTCTTCATCCTCCGGTCAGCCTAGCCTACAATCTCAGAGCTTTGGCTCTGCCACTGCTTCAAGATATGCCTACTACTCGGCTTATGATGAGCGGAATGAGGGCGTTGATGGTGAATCACCTCAAAGGTGTAAAGCCAGATTAGAGAGGCATCAAAGAACAGCAGAACGTGCAGCAAAAGCTCTGGCAGAAAAAAATATGCGTGATCTTCTGGCACAAAGAGAGCAAGCTGAGAGAAATAGATTAGCTGAGACATTGGATGCTGATGTTAGGAGATGGTCAAGTGGGAAGGAAGGGAACTTGCGTGCGTTGCTTTCTACATTGCAATATATCCTTGGACCTGATAGCGGTTGGCAGCCAATCCCCTTAACGGAAGTTATAACTGCCGTTGCTGTAAAGAAAGCTTACAGGAAAGCCACTCTGTGTGTTCATCCAGACAAATTGCAACAACGGGGTGCAAGTATTCAGCAAAAGTATATATGCGAGAAGGTTTTTGATCTACTAAAGGAAGCTTGGAACAAATTCAACTCAGAAGAGCGGTAG 4299 42.73 MDNLSHSRLPNRGSTSLSKKICNGSNGGGPFVAQTIYDDVYGGPPKFGVSALSPRFEDYGEIFGSFHALRASSIPILDLPAVNESEVFFDARSSAFDYAEVFGGFDGLDFAISYDELVGLSKGVDDGSSDEAWTPAGTESLSDCSDHSGNSHCMSNGDSKQSFEESTEFCISYNKVDRESNGNISNGKIHVTQLEMLPGFSYLVDEANPSPKATDDDPSLQTNDDNYLNIDFDTGKVKGKHPRNTMPPLVDSNDPGPLFEDNPISQNGYGRGVCRSHEDFITVSEISLRTEPSQVPPPARPPPKFATKKRDYARRTLSCGEAASELISDDHTLPSFDVEVDASSSAAASAAAMKEAMEKAQAQLQNAKDLWKRKKEGVHGRLRLDLKNDIREKDGKLSKIPNRFRTLANESELGAGEIHGHEMNLSAREERQKDGKATEVCSTHYGGEELLTEAEKTLPIRSGSRFFVSENHDCCNKWKDATEFFELARADISGKEFESVNNDAISNFVTAQMGVEINNAWENDKNQDKKVNAFHTTHILNEAVKNLENMVHGKKEDKIKLKPNKKETRQKEQVKLKIHQNFCDLEANDMKFGVAQGFMEIKKQMGCASDPEKREKPMEFRQLDSELKVEHPLVSPRDIEQEKKTVVERKKNGYSLKDSHITENNANKMEAIDNEKRAMFPEASEREKVEQKMRMFLERPEDKKRLNLVLEDDNFMGQMARERQLEGVCDMEDHGEKEKEAAKVGVSERPELAHEIEDDNKWAQDFQYREVCEKGVDDSFQHLNIGEIPRDVGQCKVTSMLVKDSQDSTDLNGTSSEHDGLKRLDDKHKVNSTIESQVHDLGISAAALQIKDDKDHLPSELACPRGMSEEFSIVDESGERKTTVIVNENLEFNKNSCVPGVCQPEVEHHNVPVEMEDADIQLSFDELIKRAAKETQFQSEIEHTQLEPTNSEDGLSSENSTSMDEGENIDKLEDMKSSLPLDRSDEKAGQAGGCIEGSVGRKKVVTGMGFVPEHPESNLSCCMEDKGKSSDQVEDKGQKAPVQGVNVRAEKGSGLRSTWQNISERTRKSGEFSCEVNANHAPERKEKIVIQNHTSKGKESERARSEAESENLRKLEEEREREREREKDRMPIDRISLEPRDRAGAEARERVERAALERMTAEARQRALADARERLEKACAEARENSLAGKAATMEARVKAERAAVERATAEARERAAEKAKSDKTSFGARERMERSVSDKFSASSRNNEMRQKSSSSGQPSLQSQSFGSATASRYAYYSAYDERNEGVDGESPQRCKARLERHQRTAERAAKALAEKNMRDLLAQREQAERNRLAETLDADVRRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTEVITAVAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER* 1433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3871269 3877007 - Chy2G029000.1 Chy02g00633 220081

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00633 1432 Coils Coil 1191 1211 - -
Chy02g00633 1432 MobiDBLite consensus disorder prediction 940 963 - -
Chy02g00633 1432 MobiDBLite consensus disorder prediction 1206 1239 - -
Chy02g00633 1432 ProSiteProfiles dnaJ domain profile. 1368 1432 IPR001623 -
Chy02g00633 1432 MobiDBLite consensus disorder prediction 1206 1266 - -
Chy02g00633 1432 Coils Coil 1161 1185 - -
Chy02g00633 1432 PANTHER AUXILIN, ISOFORM A 15 1427 - -
Chy02g00633 1432 SUPERFAMILY Chaperone J-domain 1288 1431 IPR036869 -
Chy02g00633 1432 MobiDBLite consensus disorder prediction 289 310 - -
Chy02g00633 1432 Gene3D DnaJ domain 1305 1432 IPR036869 -
Chy02g00633 1432 MobiDBLite consensus disorder prediction 1078 1149 - -
Chy02g00633 1432 MobiDBLite consensus disorder prediction 133 160 - -
Chy02g00633 1432 MobiDBLite consensus disorder prediction 1025 1045 - -
Chy02g00633 1432 MobiDBLite consensus disorder prediction 1077 1149 - -
Chy02g00633 1432 Coils Coil 1297 1332 - -
Chy02g00633 1432 MobiDBLite consensus disorder prediction 940 969 - -
Chy02g00633 1432 MobiDBLite consensus disorder prediction 128 160 - -
Chy02g00633 1432 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 15 1427 - -
Chy02g00633 1432 MobiDBLite consensus disorder prediction 1 21 - -
Chy02g00633 1432 MobiDBLite consensus disorder prediction 1240 1266 - -
Chy02g00633 1432 Coils Coil 350 374 - -
Chy02g00633 1432 Coils Coil 1098 1129 - -
Chy02g00633 1432 MobiDBLite consensus disorder prediction 205 224 - -
Chy02g00633 1432 MobiDBLite consensus disorder prediction 234 256 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00633 - - - csv:101221934 2591.99
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00633 Chy-Chr2:3871269 Chy12g00358 Chy-Chr12:3848857 5.52E-31 dispersed
Chy03g00758 Chy-Chr3:10156227 Chy02g00633 Chy-Chr2:3871269 1.34E-51 transposed
Chy04g00532 Chy-Chr4:5296910 Chy02g00633 Chy-Chr2:3871269 1.45E-34 transposed
Chy02g00633 Chy-Chr2:3871269 Chy04g00487 Chy-Chr4:4656723 2.00E-90 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g999 Blo04g00910 Blo16g00053 . . Bpe15g00422 Bpe13g00437 . . . . . Cma07g00477 Car03g00673 Car07g00420 Sed14g1132 Cpe19g00817 Cpe10g00623 Bhi03g01324 Tan03g1999 Cmetu08g1509 . . . . Cla01g01920 . . . Clacu01g2027 Cmu01g1902 . . Cone12ag0778 Cone6ag1638 Cone9ag1558 Lsi01g00666 . . Cme08g00860 . . Bda11g01857 . . . Bma03g00985 Bma06g00115 . . Cmo07g00477 . . . . . . . . . . . . . . . . . . . . . Csa06g03256 Chy02g00633 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004571 1 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 2 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy02g00633 Chy_Chr02 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0