Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy02g00640 | ATGAACGACTTGATGACGAAATCGTTCTTAAGTTATGTAGAATTGAAGAAACAGGCGCAGAGGGAAGCTGTAGGCGGTGGCGGCCACGGCTTCGACATTGAATCCGGTGGCCAAAAACTGAATCCGACGGAAGAACAGAACCTGTCTCTGTTTTTCGAAAAAGTCGATGAAATCAAGACCCAAATGGAAGAGACAACCAATCTCTTAGTTGACATTCAGAAACTAAATCAAGAAGCCAAATCAACCCACAACGCCAAAATCCTCCGTGGATTAAGAGACAGAATCGACTCGGATATGGTTTCAACCCTCCGCAGAGCAAGAATCCTCAAAGAAAAATTGGCCTCTCTCGACCAATCCAACACCGCCAACCGCCTGATCTCCGTCGCATACGGCGAAGGAACCATCGTGGACAGGACAAGAACTTCAATCACGAACGGATTGAGAGTGAAATTGAGAGAAATGATGAACGAATTTCAGGGGTTGAGAGAAAAAGTTGTGGCGGATCATAAGGAAGATCTAAGAAGAAGGTATTTTAGTGCAACTGGGGAACAACCCAGTGAAGAACAAGTGGAGAAGATTATGTCTGGGAGTTTGAAATTGGAAACGTTAGGAGGGAAATTGAGTGAGACCGAGTCAGAGGACCGAGTGAGGCACGAGTCAGTGATGGATATACAGAAGAGTTTGAATAAGCTTCATCAGGTGTTTTTGGATATGGCGATTTTGGTTGAGAGTGAAGGGGAGAAAATCGAGGATATTGAAGAGAATGTGGCGAAAGCTGGGCAGTTCATCAACGGCGGAACTCGAAGCCTTTATTATGCGAAGCAGATGAAGAGGAAGAACAAGAAATGGGTGTATTGGGTTTGGGCTATCATTTTTGTTATATTGCTTGTTTGCATTGTTTCAATGTTGGTTTGTTGA | 918 | 44.23 | MNDLMTKSFLSYVELKKQAQREAVGGGGHGFDIESGGQKLNPTEEQNLSLFFEKVDEIKTQMEETTNLLVDIQKLNQEAKSTHNAKILRGLRDRIDSDMVSTLRRARILKEKLASLDQSNTANRLISVAYGEGTIVDRTRTSITNGLRVKLREMMNEFQGLREKVVADHKEDLRRRYFSATGEQPSEEQVEKIMSGSLKLETLGGKLSETESEDRVRHESVMDIQKSLNKLHQVFLDMAILVESEGEKIEDIEENVAKAGQFINGGTRSLYYAKQMKRKNKKWVYWVWAIIFVILLVCIVSMLVC* | 306 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3907457 | 3908374 | + | Chy2G029070.1 | Chy02g00640 | 220088 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy02g00640 | 305 | Coils | Coil | 55 | 75 | - | - | |
Chy02g00640 | 305 | PANTHER | SYNTAXIN-112 | 4 | 301 | - | - | |
Chy02g00640 | 305 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 211 | 273 | IPR000727 | - | |
Chy02g00640 | 305 | CDD | SNARE_syntaxin1-like | 217 | 270 | - | - | |
Chy02g00640 | 305 | Gene3D | - | 43 | 176 | - | - | |
Chy02g00640 | 305 | SMART | tSNARE_6 | 206 | 273 | IPR000727 | - | |
Chy02g00640 | 305 | SMART | SynN_4 | 43 | 170 | IPR006011 | GO:0016020 | |
Chy02g00640 | 305 | SUPERFAMILY | t-snare proteins | 47 | 266 | IPR010989 | GO:0016020|GO:0016192 | |
Chy02g00640 | 305 | CDD | SynN | 51 | 198 | IPR006011 | GO:0016020 | |
Chy02g00640 | 305 | PANTHER | SYNTAXIN | 4 | 301 | IPR045242 | - | |
Chy02g00640 | 305 | Gene3D | - | 206 | 304 | - | - | |
Chy02g00640 | 305 | Pfam | Syntaxin | 51 | 246 | IPR006011 | GO:0016020 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g00640 | Chy-Chr2:3907457 | Chy08g00517 | Chy-Chr8:12391637 | 2.93E-73 | dispersed | |
Chy02g00640 | Chy-Chr2:3907457 | Chy04g01850 | Chy-Chr4:24681494 | 3.66E-59 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy02g00640 | K08486 | - | csv:101217836 | 584.334 |