Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00667 ATGTCGGACCATTCCGATGAACAACACTCCTTCAGAACAATTACCACTGCTTTCATTCCGTTCATTGGAGACGATGATTCTGATGATTCGGGTTCTGACTTCGTCTTCAACATCGAACCTACTTTGCTCATTGACCCTCATTGTTTGAAGATTGGTGAAGTTATTGGGGAAGGTTCATGCTCTATTGTCTATGAAGGACTGTATGATTATCAGCCTGTCGCCGTGAAGATTATACAGCCAATTAGAGCATCAGCTATAAGTCCTGAAAAGAAGGAGATATTTCAGAGGGAGGTTACGTTGCTAGCTAGACTGAATCATGAGAACATTATTAAGTTCATTGGTGCTTCCATAGAGCCAACATTGATGATAATCACTGAGCTTATGAGAGGTGGAACACTCCAGAAGTACTTATGGAGCATCCGGCCAGAGACCCCAGATTCGAAGTTTTCCTTAAGTCTTGCTCTAGATCTATCACGAGTAATGACATACCTGCATTCAAATGGCATCATTTATCGCGATTTAAAGCCAAGCAATCTACTGCTGACAGAAGACAAGCAACGGGTTAAACTGGCAAACTTTGGGTTGGCTAGAGAGGAAATATCTGGTGAAATGACTACTGAGGCTGGTACTTACCGTTGGATGGCGCCTGAGTTATTTAGCATAGATCCATTGCCTGTTGGATGTAAGAAATGCTACAATCACAAGGCAGATGTCTACAGCTTCTCAATAATTCTTTGGGAATTGCTGACAAACAAGACTCCATTCAAAGGCAGAAATGACATAATGGTTGCATATGCCGTAGCCAAGAACATAAGACCAAGTCTTGAAGAAATCCCAGAAAATATGGCCCCTCTATTGCAGTCATGTTGGGCTGAGGATCCCAATAGCCGTCCAGAATTTACAGAAGTCACAGATTATCTTAATAATCTTCTTCAATCATTTGTCTTAAAAGAATCTTCACTTTCTAACATGGATGACAAAACAGAGGAGAAAGAGGAGGAGGAGAAGGTCAAGTGTAATCCTATAACGACACCGTCACACCCGATCCCTATCACTCCGTTTTACCACGCGCAGCCTTCTTTGTTGGCAGAGGCGGTTCTACTGCTGGCGCCACCCATTTCTTCCGCCGTACTTTGTATCCCTACCCTTCCCGCCTCCGCCGCCGGCTCACAACCGCCACACTCGCCTTCACACACAGACTTACTTGGTTTTTGTGAAGCTCCTGGTTTCTTTTCTGAGCCGCAGAGATTGGATTTGGATTTCGAGAGGTCCAGAATCCGCAATTCTCAACCGTTGATCTTCCAGTCAACTACCTACATACAGACACGCCTTCCACCTGGACTTCCACATCATTCATCTCAAACCTTCTTGCGCCATGGAAGCAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGAGTTATAGTTTCTTCGTACACAGACACGTAG 1452 44.49 MSDHSDEQHSFRTITTAFIPFIGDDDSDDSGSDFVFNIEPTLLIDPHCLKIGEVIGEGSCSIVYEGLYDYQPVAVKIIQPIRASAISPEKKEIFQREVTLLARLNHENIIKFIGASIEPTLMIITELMRGGTLQKYLWSIRPETPDSKFSLSLALDLSRVMTYLHSNGIIYRDLKPSNLLLTEDKQRVKLANFGLAREEISGEMTTEAGTYRWMAPELFSIDPLPVGCKKCYNHKADVYSFSIILWELLTNKTPFKGRNDIMVAYAVAKNIRPSLEEIPENMAPLLQSCWAEDPNSRPEFTEVTDYLNNLLQSFVLKESSLSNMDDKTEEKEEEEKVKCNPITTPSHPIPITPFYHAQPSLLAEAVLLLAPPISSAVLCIPTLPASAAGSQPPHSPSHTDLLGFCEAPGFFSEPQRLDLDFERSRIRNSQPLIFQSTTYIQTRLPPGLPHHSSQTFLRHGSRSLSLSLSLSLSRVIVSSYTDT* 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4044918 4050080 - Chy2G029340.1 Chy02g00667 220115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00667 483 SMART serkin_6 49 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00667 483 Gene3D Transferase(Phosphotransferase) domain 1 130 345 - -
Chy02g00667 483 MobiDBLite consensus disorder prediction 322 343 - -
Chy02g00667 483 MobiDBLite consensus disorder prediction 322 340 - -
Chy02g00667 483 Gene3D Phosphorylase Kinase; domain 1 38 129 - -
Chy02g00667 483 ProSiteProfiles Protein kinase domain profile. 49 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00667 483 PANTHER SERINE-THREONINE PROTEIN KINASE 24 336 - -
Chy02g00667 483 SUPERFAMILY Protein kinase-like (PK-like) 42 316 IPR011009 -
Chy02g00667 483 PRINTS Tyrosine kinase catalytic domain signature 236 258 IPR001245 GO:0004672|GO:0006468
Chy02g00667 483 PRINTS Tyrosine kinase catalytic domain signature 278 300 IPR001245 GO:0004672|GO:0006468
Chy02g00667 483 PRINTS Tyrosine kinase catalytic domain signature 125 138 IPR001245 GO:0004672|GO:0006468
Chy02g00667 483 PRINTS Tyrosine kinase catalytic domain signature 163 181 IPR001245 GO:0004672|GO:0006468
Chy02g00667 483 PANTHER PROTEIN KINASE ATN1-LIKE PROTEIN-RELATED 24 336 - -
Chy02g00667 483 CDD STKc_MAP3K-like 55 307 - -
Chy02g00667 483 Pfam Protein tyrosine and serine/threonine kinase 49 306 IPR001245 GO:0004672|GO:0006468
Chy02g00667 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00667 Chy-Chr2:4044918 Chy09g00366 Chy-Chr9:3200310 3.93E-94 dispersed
Chy02g00667 Chy-Chr2:4044918 Chy02g02618 Chy-Chr2:29333915 1.05E-99 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71044 PF07714 PK_Tyr_Ser-Thr 4.90E-50 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00667 - - csv:101216416 650.203