Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy02g00667 | ATGTCGGACCATTCCGATGAACAACACTCCTTCAGAACAATTACCACTGCTTTCATTCCGTTCATTGGAGACGATGATTCTGATGATTCGGGTTCTGACTTCGTCTTCAACATCGAACCTACTTTGCTCATTGACCCTCATTGTTTGAAGATTGGTGAAGTTATTGGGGAAGGTTCATGCTCTATTGTCTATGAAGGACTGTATGATTATCAGCCTGTCGCCGTGAAGATTATACAGCCAATTAGAGCATCAGCTATAAGTCCTGAAAAGAAGGAGATATTTCAGAGGGAGGTTACGTTGCTAGCTAGACTGAATCATGAGAACATTATTAAGTTCATTGGTGCTTCCATAGAGCCAACATTGATGATAATCACTGAGCTTATGAGAGGTGGAACACTCCAGAAGTACTTATGGAGCATCCGGCCAGAGACCCCAGATTCGAAGTTTTCCTTAAGTCTTGCTCTAGATCTATCACGAGTAATGACATACCTGCATTCAAATGGCATCATTTATCGCGATTTAAAGCCAAGCAATCTACTGCTGACAGAAGACAAGCAACGGGTTAAACTGGCAAACTTTGGGTTGGCTAGAGAGGAAATATCTGGTGAAATGACTACTGAGGCTGGTACTTACCGTTGGATGGCGCCTGAGTTATTTAGCATAGATCCATTGCCTGTTGGATGTAAGAAATGCTACAATCACAAGGCAGATGTCTACAGCTTCTCAATAATTCTTTGGGAATTGCTGACAAACAAGACTCCATTCAAAGGCAGAAATGACATAATGGTTGCATATGCCGTAGCCAAGAACATAAGACCAAGTCTTGAAGAAATCCCAGAAAATATGGCCCCTCTATTGCAGTCATGTTGGGCTGAGGATCCCAATAGCCGTCCAGAATTTACAGAAGTCACAGATTATCTTAATAATCTTCTTCAATCATTTGTCTTAAAAGAATCTTCACTTTCTAACATGGATGACAAAACAGAGGAGAAAGAGGAGGAGGAGAAGGTCAAGTGTAATCCTATAACGACACCGTCACACCCGATCCCTATCACTCCGTTTTACCACGCGCAGCCTTCTTTGTTGGCAGAGGCGGTTCTACTGCTGGCGCCACCCATTTCTTCCGCCGTACTTTGTATCCCTACCCTTCCCGCCTCCGCCGCCGGCTCACAACCGCCACACTCGCCTTCACACACAGACTTACTTGGTTTTTGTGAAGCTCCTGGTTTCTTTTCTGAGCCGCAGAGATTGGATTTGGATTTCGAGAGGTCCAGAATCCGCAATTCTCAACCGTTGATCTTCCAGTCAACTACCTACATACAGACACGCCTTCCACCTGGACTTCCACATCATTCATCTCAAACCTTCTTGCGCCATGGAAGCAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGAGTTATAGTTTCTTCGTACACAGACACGTAG | 1452 | 44.49 | MSDHSDEQHSFRTITTAFIPFIGDDDSDDSGSDFVFNIEPTLLIDPHCLKIGEVIGEGSCSIVYEGLYDYQPVAVKIIQPIRASAISPEKKEIFQREVTLLARLNHENIIKFIGASIEPTLMIITELMRGGTLQKYLWSIRPETPDSKFSLSLALDLSRVMTYLHSNGIIYRDLKPSNLLLTEDKQRVKLANFGLAREEISGEMTTEAGTYRWMAPELFSIDPLPVGCKKCYNHKADVYSFSIILWELLTNKTPFKGRNDIMVAYAVAKNIRPSLEEIPENMAPLLQSCWAEDPNSRPEFTEVTDYLNNLLQSFVLKESSLSNMDDKTEEKEEEEKVKCNPITTPSHPIPITPFYHAQPSLLAEAVLLLAPPISSAVLCIPTLPASAAGSQPPHSPSHTDLLGFCEAPGFFSEPQRLDLDFERSRIRNSQPLIFQSTTYIQTRLPPGLPHHSSQTFLRHGSRSLSLSLSLSLSRVIVSSYTDT* | 484 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4044918 | 4050080 | - | Chy2G029340.1 | Chy02g00667 | 220115 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy02g00667 | 483 | SMART | serkin_6 | 49 | 315 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy02g00667 | 483 | Gene3D | Transferase(Phosphotransferase) domain 1 | 130 | 345 | - | - | |
Chy02g00667 | 483 | MobiDBLite | consensus disorder prediction | 322 | 343 | - | - | |
Chy02g00667 | 483 | MobiDBLite | consensus disorder prediction | 322 | 340 | - | - | |
Chy02g00667 | 483 | Gene3D | Phosphorylase Kinase; domain 1 | 38 | 129 | - | - | |
Chy02g00667 | 483 | ProSiteProfiles | Protein kinase domain profile. | 49 | 315 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy02g00667 | 483 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 24 | 336 | - | - | |
Chy02g00667 | 483 | SUPERFAMILY | Protein kinase-like (PK-like) | 42 | 316 | IPR011009 | - | |
Chy02g00667 | 483 | PRINTS | Tyrosine kinase catalytic domain signature | 236 | 258 | IPR001245 | GO:0004672|GO:0006468 | |
Chy02g00667 | 483 | PRINTS | Tyrosine kinase catalytic domain signature | 278 | 300 | IPR001245 | GO:0004672|GO:0006468 | |
Chy02g00667 | 483 | PRINTS | Tyrosine kinase catalytic domain signature | 125 | 138 | IPR001245 | GO:0004672|GO:0006468 | |
Chy02g00667 | 483 | PRINTS | Tyrosine kinase catalytic domain signature | 163 | 181 | IPR001245 | GO:0004672|GO:0006468 | |
Chy02g00667 | 483 | PANTHER | PROTEIN KINASE ATN1-LIKE PROTEIN-RELATED | 24 | 336 | - | - | |
Chy02g00667 | 483 | CDD | STKc_MAP3K-like | 55 | 307 | - | - | |
Chy02g00667 | 483 | Pfam | Protein tyrosine and serine/threonine kinase | 49 | 306 | IPR001245 | GO:0004672|GO:0006468 | |
Chy02g00667 | 483 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 169 | 181 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g00667 | Chy-Chr2:4044918 | Chy09g00366 | Chy-Chr9:3200310 | 3.93E-94 | dispersed | |
Chy02g00667 | Chy-Chr2:4044918 | Chy02g02618 | Chy-Chr2:29333915 | 1.05E-99 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71044 | PF07714 | PK_Tyr_Ser-Thr | 4.90E-50 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy02g00667 | - | - | csv:101216416 | 650.203 |