Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy02g00673 | ATGACGGGCCGAGGATCATCGGGAAGGACGCCGACATGGAAAGAAAGGGAGAACAATAAGAGGAGAGAGAGGCGACGGAGGGCCATTGCTGCCAAGATCTACACTGGCCTTAGAGCTCAAGGGAACTATAAGCTTCCTAAGCACTGTGACAACAACGAGGTCTTAAAGGCACTCTGTAATGAAGCTGGTTGGGTGGTTGAGGAAGATGGCACAACCTATCGCAAGGGATGCAAGCCACCTCCGATTGATATAGGCACTTCTGCGAATATGAGCGCCTGTTCTTCGCTTCAACCAAGCCCACAGTCCTCATGTTTCCCAAGTCCTGTACCATCCTACCATGCCAGTCCTTCTTCATCCTCTTTTCCAAGCCCAACTCGATTTGATGGGAATCCATCTTCTTATCTTCTGCCATTTCTTCAAAATATATCCTCTATTCCTGCTAATCTACCTCCTCTTAGGATATCCAACAGTGCCCCTGTCACGCCACCTCTTTCTTCCCCAACTTCAAGGGGTTCGAAGCGAAAGCCAGATTGGGAGTCCATTCCAAATAGCTATGTAACCTCTTTCCGTCATCCACTTTTTGCTGTCTCTGCTCCTTCAAGTCCTACAAGATGCCACCATCTTACACCGGCAACAATTCCAGAATGTGATGAGTCTGATGCTTCAACTGTAGATTCTGGCCGCTGGGTCAGTTTCCAGACTGTGGCACCTTCTGTGGCTCCTCCTTCGCCTACATTTAACCTGATGAAACCAGTTAGCCAGCAAAACTCTCTCCAAGATGCAGTTGACAGACATGGAGCAATAGGCTGGGGTGCTACATCTGATAGGGGACGAGGCTCTGAGTTTGAATTTGAGAAATTTGAGAGTGGCACGGTGAAGCCATGGGAGGGTGAGAGAATTCATGAAGTTGGGGTTGATGATTTGGAGCTTACTCTTGGAGGTGGGAAGGCCCGTGGTTAA | 960 | 48.96 | MTGRGSSGRTPTWKERENNKRRERRRRAIAAKIYTGLRAQGNYKLPKHCDNNEVLKALCNEAGWVVEEDGTTYRKGCKPPPIDIGTSANMSACSSLQPSPQSSCFPSPVPSYHASPSSSSFPSPTRFDGNPSSYLLPFLQNISSIPANLPPLRISNSAPVTPPLSSPTSRGSKRKPDWESIPNSYVTSFRHPLFAVSAPSSPTRCHHLTPATIPECDESDASTVDSGRWVSFQTVAPSVAPPSPTFNLMKPVSQQNSLQDAVDRHGAIGWGATSDRGRGSEFEFEKFESGTVKPWEGERIHEVGVDDLELTLGGGKARG* | 320 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 4095543 | 4097052 | - | Chy2G029400.1 | Chy02g00673 | 220121 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy02g00673 | 319 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 6 | 129 | IPR008540 | - | |
| Chy02g00673 | 319 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Chy02g00673 | 319 | MobiDBLite | consensus disorder prediction | 155 | 179 | - | - | |
| Chy02g00673 | 319 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 1 | 318 | IPR033264 | GO:0003700|GO:0006351|GO:0009742 | |
| Chy02g00673 | 319 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 1 | 1 | 318 | - | - | |
| Chy02g00673 | 319 | MobiDBLite | consensus disorder prediction | 155 | 171 | - | - | |
| Chy02g00673 | 319 | MobiDBLite | consensus disorder prediction | 10 | 24 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy02g00673 | Chy-Chr2:4095543 | Chy11g01639 | Chy-Chr11:22901362 | 2.20E-15 | dispersed | |
| Chy07g00983 | Chy-Chr7:14482967 | Chy02g00673 | Chy-Chr2:4095543 | 4.75E-43 | transposed | |
| Chy12g00053 | Chy-Chr12:481166 | Chy02g00673 | Chy-Chr2:4095543 | 4.57E-48 | transposed | |
| Chy02g00673 | Chy-Chr2:4095543 | Chy03g01481 | Chy-Chr3:17260030 | 1.28E-97 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 17469 | PF05687 | BES1_N | 1.80E-64 | No_clan | Chy | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy02g00673 | K14503 | - | csv:101216171 | 577.785 |