Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00745 ATGGATTTCGAAGATCAAGACGAACACGAAGAAGAAGAGATGGACATGGCGGCAGCGAGTTACGACGACTCGTTGCCCAACTCAGGAACCCGACTCAAAATCCCCACTACTACTGACCAAATCATGTCATCATCTCCTGCACAGAGGAAACCCAAATACAGAGAGTGCTTAAAAAATCACGCCGTTGGCATTGGAGGTCACGCCCTTGACGGTTGCGGCGAATTTCTAGCCGCTGGAGCTGAAGGTACACTCGACGCTCTTAAATGCGCCGCTTGTAACTGCCACCGCAACTTCCACCGTAAAGAAACCGACAACAGCCTTAACCCCGCCGTAGGCGTCGGTCTCGGAATCGGAGAGCCATTTCTATTACCCCACCCAGGACAGTTCTCCCCTTACTACCGAACCCCAGCTGGATACCTCCACGTGGCGCCACATCACAGGCCATTAGCTCTCCCGTCGACATCAGGCGGCGGTGGCACCCACAGCAGAGAAGAACAGGAAGATATGTCGAATCCGAGCGGCGGAGGTGGCGGAGGAAGTAGTAGCTTTGGGAAGAAGAGATTTAGAACTAAATTTACACAAGAACAGAAGGACAGAATGCTGGGACTGGCGGAGACATTGGGTTGGAGAATTCAAAAACACGACGAGGCGGTGGTGCAGCAGTTCTGTAACGACACGGGAGTAAAGCGGCACGTGCTTAAGGTGTGGATGCATAATAACAAGCACACTCTTGGTAAGAAACCCTAG 747 52.34 MDFEDQDEHEEEEMDMAAASYDDSLPNSGTRLKIPTTTDQIMSSSPAQRKPKYRECLKNHAVGIGGHALDGCGEFLAAGAEGTLDALKCAACNCHRNFHRKETDNSLNPAVGVGLGIGEPFLLPHPGQFSPYYRTPAGYLHVAPHHRPLALPSTSGGGGTHSREEQEDMSNPSGGGGGGSSSFGKKRFRTKFTQEQKDRMLGLAETLGWRIQKHDEAVVQQFCNDTGVKRHVLKVWMHNNKHTLGKKP* 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4605793 4606539 + Chy2G030120.1 Chy02g00745 220193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00745 248 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 36 247 - -
Chy02g00745 248 SUPERFAMILY Homeodomain-like 172 246 IPR009057 -
Chy02g00745 248 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 185 241 IPR006455 -
Chy02g00745 248 MobiDBLite consensus disorder prediction 23 47 - -
Chy02g00745 248 Gene3D - 170 246 - -
Chy02g00745 248 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 52 102 IPR006456 -
Chy02g00745 248 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 36 247 - -
Chy02g00745 248 MobiDBLite consensus disorder prediction 148 185 - -
Chy02g00745 248 Pfam ZF-HD protein dimerisation region 52 103 IPR006456 -
Chy02g00745 248 MobiDBLite consensus disorder prediction 1 18 - -
Chy02g00745 248 MobiDBLite consensus disorder prediction 1 50 - -
Chy02g00745 248 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 53 102 IPR006456 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00645 Chy-Chr2:3929084 Chy02g00745 Chy-Chr2:4605793 1.95E-55 dispersed
Chy02g00745 Chy-Chr2:4605793 Chy03g01454 Chy-Chr3:17118515 3.13E-57 dispersed
Chy02g00745 Chy-Chr2:4605793 Chy03g01330 Chy-Chr3:16297386 2.23E-55 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17474 PF04770 ZF-HD_dimer 1.00E-28 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00745 - - csv:101204784 480.33