Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00746 ATGGCGGATAGTTTTTACTGTACAGAGAATGCCAATATTTGTTTTGATGAAAATAATGAATTTGATGAACGATGCTCAATTTCTCTGCCCCATCGAAGAAGAACCCGTGACCCCAATGTTGAGTTTTTCGGATCCGAAAATTTTCTGGGCTCTTCTGTATTAGAGAGTGAAGAGAGAGTTAAAAGAATGGTTGAGAAAGAGATTGAGCATTTACCAACTCATGATTATCTTAAGAGAATGCTCTCTGGGGATTTGGATTTGAAGTTTAGAAGAGAGGCTGTTGATTGGATTTGGAAGGCTCATGCCCATTACAGCTTTGGTCCTCTGAGTCTTTGTTTATCTATGAACTACTTGGACCGTTTCCTCTCAGTGTATCATTTGCCTATCGATAAAAGCTGGACTGTGCAGCTGCTGTCAGTAGCTTGTATGTCTTTAGCAGCAAAAATGGAGGAGACAGAAGTTCCTCTTCCTATAGATTTACAGGTTGAGGAACCTAAGTTTGTGTTTGAAGCAAAAACCATACAAAGAATGGAACTTCTTGTTCTAAGTAGGTTGAAATGGAAAATGCAAGCCATAACTCCATTTTCTTTCATTGATTATTTCCTCAGTAAGATCAGTGTTGAGCAGCAGAACATACCAAGCCTATACTTCTCAAAATCATCACAACTCATTCTGAGCACAATTAAAGGCATTGACTTCTTGGAATTCAAGCCTTCTGAAATTGCTTTGGCTGTGGCAATTTCCATTTCAAGAGAATTTCAAATACCAGATATGAATAAAGCAATTCTTTCTTTTCCATATATGGAGAAAGAAAGAGTGATGAAGTGTATTGATCTGATTAGAGATTTTTCATTGATTAGTAATGTATATGGAAATACAATGGGTGGTGGTAATGTTGGTTCAGTTCCTCAAAGCCCTGTTGGGGTTTTGGATGCAGCTTGTTTGAGTTACAAAACAGAGGAATTATTAACTGCAGGGTTGGCTGATATGTCACTTTTGCCACCTAGTCCGTCTCCTCATAATAATGCTCATGCAAATATGGTAAAGATGGAGGAGAAGGGTTTAAAGCATGAAATTATTTCAGAGGAAGAGCTGAAAATCCGGCGAGAAATTGAGAATGAAATAGAGAGAGATTTGGAGGAAGAGATTAAGGGAGGGATATACCAACAAGCTCTCCGCCTTCACCGCCTTTATCACTACCGGAAAATTTCCGCTCATATTAAGCCGGCGGCGAAAGCCAAGAAGGAGCTTTTGGAGGTAAATATCAGCATCAAAATGGATGGGGGGACTAAAATGGAAATAAAAGAGACAAAAAAGGAGGCGCCGCAGCCGGAAAGTCTCCGATCGAGGACTTCCCGGTCCAACACCCTCTCTCGATCTGTCCCGGAGATGAAAAGGTTGGATTGGGCTAAGTCTCTACGGTCGAGTGCGGCGCCGGTGCCGTCTCTCGGAAAGAAACGTCAGGTTTGA 1470 41.02 MADSFYCTENANICFDENNEFDERCSISLPHRRRTRDPNVEFFGSENFLGSSVLESEERVKRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKAHAHYSFGPLSLCLSMNYLDRFLSVYHLPIDKSWTVQLLSVACMSLAAKMEETEVPLPIDLQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKISVEQQNIPSLYFSKSSQLILSTIKGIDFLEFKPSEIALAVAISISREFQIPDMNKAILSFPYMEKERVMKCIDLIRDFSLISNVYGNTMGGGNVGSVPQSPVGVLDAACLSYKTEELLTAGLADMSLLPPSPSPHNNAHANMVKMEEKGLKHEIISEEELKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHYRKISAHIKPAAKAKKELLEVNISIKMDGGTKMEIKETKKEAPQPESLRSRTSRSNTLSRSVPEMKRLDWAKSLRSSAAPVPSLGKKRQV* 490
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 4612117 4619969 - Chy2G030130.1 Chy02g00746 220194
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00746 489 SMART Cyclin_C_2 192 305 IPR004367 -
Chy02g00746 489 Pfam Cyclin, N-terminal domain 61 189 IPR006671 -
Chy02g00746 489 MobiDBLite consensus disorder prediction 447 461 - -
Chy02g00746 489 SMART cyclin_7 95 183 IPR013763 -
Chy02g00746 489 MobiDBLite consensus disorder prediction 431 463 - -
Chy02g00746 489 MobiDBLite consensus disorder prediction 431 446 - -
Chy02g00746 489 Coils Coil 362 382 - -
Chy02g00746 489 CDD CYCLIN 90 182 IPR013763 -
Chy02g00746 489 ProSitePatterns Cyclins signature. 90 121 IPR006671 -
Chy02g00746 489 PANTHER CYCLINS 47 323 IPR039361 -
Chy02g00746 489 Gene3D - 61 278 - -
Chy02g00746 489 PANTHER CYCLIN-D4-1-LIKE 47 323 - -
Chy02g00746 489 Gene3D - 73 190 - -
Chy02g00746 489 Pfam Cyclin, C-terminal domain 192 284 IPR004367 -
Chy02g00746 489 SUPERFAMILY Cyclin-like 174 291 IPR036915 -
Chy02g00746 489 SUPERFAMILY Cyclin-like 55 189 IPR036915 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00082 Chy-Chr1:554313 Chy02g00746 Chy-Chr2:4612117 2.29E-44 dispersed
Chy02g00746 Chy-Chr2:4612117 Chy03g01563 Chy-Chr3:17786895 5.55E-53 dispersed
Chy07g01733 Chy-Chr7:21018011 Chy02g00746 Chy-Chr2:4612117 7.99E-63 transposed
Chy08g00736 Chy-Chr8:15131203 Chy02g00746 Chy-Chr2:4612117 4.52E-23 transposed
Chy09g00691 Chy-Chr9:9112491 Chy02g00746 Chy-Chr2:4612117 9.01E-54 transposed
Chy02g00746 Chy-Chr2:4612117 Chy03g01325 Chy-Chr3:16250589 6.70E-91 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00746 K18810 - csv:101209378 647.891