Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy02g00746 | ATGGCGGATAGTTTTTACTGTACAGAGAATGCCAATATTTGTTTTGATGAAAATAATGAATTTGATGAACGATGCTCAATTTCTCTGCCCCATCGAAGAAGAACCCGTGACCCCAATGTTGAGTTTTTCGGATCCGAAAATTTTCTGGGCTCTTCTGTATTAGAGAGTGAAGAGAGAGTTAAAAGAATGGTTGAGAAAGAGATTGAGCATTTACCAACTCATGATTATCTTAAGAGAATGCTCTCTGGGGATTTGGATTTGAAGTTTAGAAGAGAGGCTGTTGATTGGATTTGGAAGGCTCATGCCCATTACAGCTTTGGTCCTCTGAGTCTTTGTTTATCTATGAACTACTTGGACCGTTTCCTCTCAGTGTATCATTTGCCTATCGATAAAAGCTGGACTGTGCAGCTGCTGTCAGTAGCTTGTATGTCTTTAGCAGCAAAAATGGAGGAGACAGAAGTTCCTCTTCCTATAGATTTACAGGTTGAGGAACCTAAGTTTGTGTTTGAAGCAAAAACCATACAAAGAATGGAACTTCTTGTTCTAAGTAGGTTGAAATGGAAAATGCAAGCCATAACTCCATTTTCTTTCATTGATTATTTCCTCAGTAAGATCAGTGTTGAGCAGCAGAACATACCAAGCCTATACTTCTCAAAATCATCACAACTCATTCTGAGCACAATTAAAGGCATTGACTTCTTGGAATTCAAGCCTTCTGAAATTGCTTTGGCTGTGGCAATTTCCATTTCAAGAGAATTTCAAATACCAGATATGAATAAAGCAATTCTTTCTTTTCCATATATGGAGAAAGAAAGAGTGATGAAGTGTATTGATCTGATTAGAGATTTTTCATTGATTAGTAATGTATATGGAAATACAATGGGTGGTGGTAATGTTGGTTCAGTTCCTCAAAGCCCTGTTGGGGTTTTGGATGCAGCTTGTTTGAGTTACAAAACAGAGGAATTATTAACTGCAGGGTTGGCTGATATGTCACTTTTGCCACCTAGTCCGTCTCCTCATAATAATGCTCATGCAAATATGGTAAAGATGGAGGAGAAGGGTTTAAAGCATGAAATTATTTCAGAGGAAGAGCTGAAAATCCGGCGAGAAATTGAGAATGAAATAGAGAGAGATTTGGAGGAAGAGATTAAGGGAGGGATATACCAACAAGCTCTCCGCCTTCACCGCCTTTATCACTACCGGAAAATTTCCGCTCATATTAAGCCGGCGGCGAAAGCCAAGAAGGAGCTTTTGGAGGTAAATATCAGCATCAAAATGGATGGGGGGACTAAAATGGAAATAAAAGAGACAAAAAAGGAGGCGCCGCAGCCGGAAAGTCTCCGATCGAGGACTTCCCGGTCCAACACCCTCTCTCGATCTGTCCCGGAGATGAAAAGGTTGGATTGGGCTAAGTCTCTACGGTCGAGTGCGGCGCCGGTGCCGTCTCTCGGAAAGAAACGTCAGGTTTGA | 1470 | 41.02 | MADSFYCTENANICFDENNEFDERCSISLPHRRRTRDPNVEFFGSENFLGSSVLESEERVKRMVEKEIEHLPTHDYLKRMLSGDLDLKFRREAVDWIWKAHAHYSFGPLSLCLSMNYLDRFLSVYHLPIDKSWTVQLLSVACMSLAAKMEETEVPLPIDLQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKISVEQQNIPSLYFSKSSQLILSTIKGIDFLEFKPSEIALAVAISISREFQIPDMNKAILSFPYMEKERVMKCIDLIRDFSLISNVYGNTMGGGNVGSVPQSPVGVLDAACLSYKTEELLTAGLADMSLLPPSPSPHNNAHANMVKMEEKGLKHEIISEEELKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHYRKISAHIKPAAKAKKELLEVNISIKMDGGTKMEIKETKKEAPQPESLRSRTSRSNTLSRSVPEMKRLDWAKSLRSSAAPVPSLGKKRQV* | 490 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4612117 | 4619969 | - | Chy2G030130.1 | Chy02g00746 | 220194 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy02g00746 | 489 | SMART | Cyclin_C_2 | 192 | 305 | IPR004367 | - | |
Chy02g00746 | 489 | Pfam | Cyclin, N-terminal domain | 61 | 189 | IPR006671 | - | |
Chy02g00746 | 489 | MobiDBLite | consensus disorder prediction | 447 | 461 | - | - | |
Chy02g00746 | 489 | SMART | cyclin_7 | 95 | 183 | IPR013763 | - | |
Chy02g00746 | 489 | MobiDBLite | consensus disorder prediction | 431 | 463 | - | - | |
Chy02g00746 | 489 | MobiDBLite | consensus disorder prediction | 431 | 446 | - | - | |
Chy02g00746 | 489 | Coils | Coil | 362 | 382 | - | - | |
Chy02g00746 | 489 | CDD | CYCLIN | 90 | 182 | IPR013763 | - | |
Chy02g00746 | 489 | ProSitePatterns | Cyclins signature. | 90 | 121 | IPR006671 | - | |
Chy02g00746 | 489 | PANTHER | CYCLINS | 47 | 323 | IPR039361 | - | |
Chy02g00746 | 489 | Gene3D | - | 61 | 278 | - | - | |
Chy02g00746 | 489 | PANTHER | CYCLIN-D4-1-LIKE | 47 | 323 | - | - | |
Chy02g00746 | 489 | Gene3D | - | 73 | 190 | - | - | |
Chy02g00746 | 489 | Pfam | Cyclin, C-terminal domain | 192 | 284 | IPR004367 | - | |
Chy02g00746 | 489 | SUPERFAMILY | Cyclin-like | 174 | 291 | IPR036915 | - | |
Chy02g00746 | 489 | SUPERFAMILY | Cyclin-like | 55 | 189 | IPR036915 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g00082 | Chy-Chr1:554313 | Chy02g00746 | Chy-Chr2:4612117 | 2.29E-44 | dispersed | |
Chy02g00746 | Chy-Chr2:4612117 | Chy03g01563 | Chy-Chr3:17786895 | 5.55E-53 | dispersed | |
Chy07g01733 | Chy-Chr7:21018011 | Chy02g00746 | Chy-Chr2:4612117 | 7.99E-63 | transposed | |
Chy08g00736 | Chy-Chr8:15131203 | Chy02g00746 | Chy-Chr2:4612117 | 4.52E-23 | transposed | |
Chy09g00691 | Chy-Chr9:9112491 | Chy02g00746 | Chy-Chr2:4612117 | 9.01E-54 | transposed | |
Chy02g00746 | Chy-Chr2:4612117 | Chy03g01325 | Chy-Chr3:16250589 | 6.70E-91 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy02g00746 | K18810 | - | csv:101209378 | 647.891 |