Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00769 ATGGAGTTGTTGCATGCAAATGCATGTTTAATTGGTACTAACTGTAAGATGGGAACTCAAGGTCAAATAGGATTAGTAGCACAAAAGAATATGCACCCTCCTCAGCCCGGAAGATTTGAAGATCGTGAAGATCTTATTAAATATGTTCGTGATTTTGGTGCTGATCAGGGATATGTTGTAACGATTAAGAAGTCTAGGAAAGATAGAAGAGTCATCCTTGGTTGTGATAGAGGAGGTGTGTACCGCAACAGGCGTAAGATTGCTGAGAGTCCACGGAAAAGGAAAGCTAGCTCACGCCTGATAAATTGCCCATTTGAAGCAATTGGCAAGAAGGAAGATGATGCCTGGATGCTTACCATTAAAAATGGAAGCCATAACCATGAGCCCTTAAAAGATAGGTCAGAGCATCCTTACAGTCGCCGTTTTACAGAGGATGAAGTAAAGCAAATAAAATTAATGACTGAAGCTGGTATAAAACCACGTCAAGTGCTTAAAGCTCTCAAACAACACAATCCAGATCTGCAGTCAACACCAAGACATTTGTATAACCTCAAAGCCAAAATTCGCCAAGGAAATCTATCAGATAAGAATTTCAAGTCTTGGAGGCCTAATATTTCCGTTCCTACAAATAGTAGTCATACCGTCACTGGGGATTCAATCAAGCAAAATCATCAGCTGAAGGTTCCTAATTTAATTGGAGGGGAATTTTTGGATTCGCACAACTGTCAAGTGGTTGATGTTATTAATCCAGCAACACAAGAAGTTGTTTCTCATGTCCCTTTAACAACCTACGAAGAGTTTAAGGCTGCTGTCAATGCAGCCAAACAAGCTTTTCCCTCATGGAGAAACACACCAATTTATACTCGTCAGTGTGTTATGTTCAAGTTCCAGGAGCTCATCCTCAGGGACATGGATAAGCTTGTAATGAATACTGTTGCAGAACAGGGAAAAACATTAAAGGATGCTCAAGATGATATCATCTGTGGTTTAGAGGTGGTGAAACATGCTTGTGGATTGGCCACTATGCAAATGGGGGAGTTCATCCCTAGTGCATCTGATGGAATTGATTCGTACTGCATCCGAGAACCAATAGGTGTGTGTGCTGGGATATGCTCTTTAAACCATCCAGCAACAGTTTCCTTATGGATGTTCCCAATTGCAGTTACATGTGGCAATACATTTGTTCTTAAACCATGTGAAACGCACCCGGGGGCTTCAATGTTGCTAGCTGCATTAGCGATGGAGTCTGGCTTGCCTGATGGTGTTCTGAATATTGTTCATGGATCCCATGATATCATCAACTATATATGTGACGACGAGGACATAAAAGCTGTATCCTTTTCCAGTTCAAGTTCAGTTGGAAAACACATATATGCTAGGGCTGCTGCTACAGCAAAGAAAATTCAGACTCACTTTGGAGGCAAGAGTCATACAATTATTATGCCTGATGCTAACATGGAGGCTACTTTAAGTGCTCTGGTTGATGCTGGATTGGGTACTGTTGGACGGACTTGTATGGCTATTGACATCATTGTCTCCGTTGGGAGTTCAACCCTGTGGGAAGAAAAACTTGTGGAATGTGCCAAAGCACTTAAGGTGAATGTGGGAACAGATCCCAATGCTGACCTTGGTCCTGTAACTACAAAAGAGGTGAAAAATCATTTTTGTAAATTAGTTCAAAGTGGCATTGAAGATGGTGCTAGACTTTTGCTAGACGGTAGAGATATCGTGGTCTCAGGATATGAAAATGGAAATTTTATCGGCCCAACCATTTTATCAGGTGTAACAACTGACATGGCGTGCTACAAGGAAGAATTTTTTGGACCAGTTCTCCTTTTTATGCAGGCTGACAACCTAGAGGAGGCTATATCCATTGTAAACCGAAACAAAAACCGAAATGGAGCTTCCATATTCACAACTTCTGGCATTTATGCGAGGAAGTTTCAGAGTGAAGTGGAAGTGGGAACGGTTGGTATCAATGTTGCTGTTACAGTTCCGTTGCCATCTTCCTTCAATGGTTTGAAGCCAACTTCTGCTGTTGATCAAGTAGGGCTGGAGTTTTACACCCAATTGAAGAGAGTGGCTCAACAGTGGAAGAACTCACTAAGTATTGGCGTCTCAATGGCGGTGCCTTCACCATCTGAGAGACGTTTGAGATCTCGTGCTGCACCTTCCATGTTGGTTTCAACATCTGAGAAAGATTCACCTGGTATGAAGCACAGGAGTTTACCCCCGTTGCCTTCCACATCTGAAAGGCATTCACCCAGCGTCGCTGTACTTCTGCCGAACCCTCGAATAACTCCCACAAGCTTAACTAATGAAAGATCCACCTCCTCTCCGCCGACTCCTGATAGGAATTTGCACGGACTCTCCCTGATTTCTACCTTATCATCGGAGGGGGATGTATCCAACCAAGATTTGTCTCCTGCAATGCTTTCAGCGCGTGATAGAGATTTACCTGGTCAAGCTATGTCAATGGCAACATCCAGATCATCTGATAGACTGTACATACCTCAGAAATCTCATTGGAATGAAACCCCGAGGGCTGATTCAATTCCATCCAGTTCTGAGAGGATCCATGCGCCTTTTTCGCAGACAAGCAGCATCAAAGGACAGGCATGTCGAACAACTCATCCTGCTTTGGTCTTAGCCGCAGAGGGGGGGTTATATGTGCCAACATCTCATGACGCTATTTGTCTAATTAACCATGGAAATGATAACACCAGTCCGTCTCGAAGAATCAACAGCATGTGTCAATCATCAGAACGGGTATACATGCTAACAACTTCTCATCTGAACGACAGTATGGGTCAAACATTGGAGAGAACTGATACCTCCTTGTTTCCTTCTTCAGAGAGGCATTATGCGCCTCCTTCTGATGGAAATGACCACATCAGCTTAGCCTCTCATACAGATGTCACTTTGCAATCAACCTCAGATAGAATGTTTTTGTCTAGTTTGTCTGAAAGGGACGATAATATGGCTTCCACTGCTTCCCAACAAGAGAGAATGTATAGACCTCCATTAGTTCATAGAAATGGAGGTATGGCACCGAAATCGGAATGGTTATGCATTCCCACGCCTGCTGGAACTCAGAGAATTTACACACAAGGTCCAATGGTTTCAGCAGATGAATTTCAATGCCAAGGAGCATCATTGACATTGCCTGCATCGCAAAGAATAGGATTGAATTTTTGA 3198 43.03 MELLHANACLIGTNCKMGTQGQIGLVAQKNMHPPQPGRFEDREDLIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIAESPRKRKASSRLINCPFEAIGKKEDDAWMLTIKNGSHNHEPLKDRSEHPYSRRFTEDEVKQIKLMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLSDKNFKSWRPNISVPTNSSHTVTGDSIKQNHQLKVPNLIGGEFLDSHNCQVVDVINPATQEVVSHVPLTTYEEFKAAVNAAKQAFPSWRNTPIYTRQCVMFKFQELILRDMDKLVMNTVAEQGKTLKDAQDDIICGLEVVKHACGLATMQMGEFIPSASDGIDSYCIREPIGVCAGICSLNHPATVSLWMFPIAVTCGNTFVLKPCETHPGASMLLAALAMESGLPDGVLNIVHGSHDIINYICDDEDIKAVSFSSSSSVGKHIYARAAATAKKIQTHFGGKSHTIIMPDANMEATLSALVDAGLGTVGRTCMAIDIIVSVGSSTLWEEKLVECAKALKVNVGTDPNADLGPVTTKEVKNHFCKLVQSGIEDGARLLLDGRDIVVSGYENGNFIGPTILSGVTTDMACYKEEFFGPVLLFMQADNLEEAISIVNRNKNRNGASIFTTSGIYARKFQSEVEVGTVGINVAVTVPLPSSFNGLKPTSAVDQVGLEFYTQLKRVAQQWKNSLSIGVSMAVPSPSERRLRSRAAPSMLVSTSEKDSPGMKHRSLPPLPSTSERHSPSVAVLLPNPRITPTSLTNERSTSSPPTPDRNLHGLSLISTLSSEGDVSNQDLSPAMLSARDRDLPGQAMSMATSRSSDRLYIPQKSHWNETPRADSIPSSSERIHAPFSQTSSIKGQACRTTHPALVLAAEGGLYVPTSHDAICLINHGNDNTSPSRRINSMCQSSERVYMLTTSHLNDSMGQTLERTDTSLFPSSERHYAPPSDGNDHISLASHTDVTLQSTSDRMFLSSLSERDDNMASTASQQERMYRPPLVHRNGGMAPKSEWLCIPTPAGTQRIYTQGPMVSADEFQCQGASLTLPASQRIGLNF* 1066
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4759868 4774819 - Chy2G030360.1 Chy02g00769 220217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00769 1065 MobiDBLite consensus disorder prediction 713 789 - -
Chy02g00769 1065 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 230 698 IPR010061 GO:0004491
Chy02g00769 1065 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 473 672 IPR016163 GO:0016620
Chy02g00769 1065 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 17 1061 - -
Chy02g00769 1065 MobiDBLite consensus disorder prediction 763 789 - -
Chy02g00769 1065 Pfam Aldehyde dehydrogenase family 238 694 IPR015590 GO:0016491
Chy02g00769 1065 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 232 675 IPR016162 GO:0016491
Chy02g00769 1065 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 17 1061 IPR010061 GO:0004491
Chy02g00769 1065 CDD ALDH_F6_MMSDH 228 698 IPR010061 GO:0004491
Chy02g00769 1065 SUPERFAMILY ALDH-like 221 700 IPR016161 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00197 Chy-Chr1:1325445 Chy02g00769 Chy-Chr2:4759868 0 dispersed
Chy02g00769 Chy-Chr2:4759868 Chy11g01046 Chy-Chr11:14923094 5.94E-52 dispersed
Chy02g00766 Chy-Chr2:4742641 Chy02g00769 Chy-Chr2:4759868 7.54E-70 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00769 K00140 - csv:101207178 1988.77