Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00772 ATGGGGCCGATTTATCTTCTGGCTGAGGTCATGCAATATGTCAGATGGACCCCAGAAACAGGGGAAAACGATGTAGCTTTTAAAGTTCTTTACTGTGGAATTTGTCATTCTGATCTTCACATGCTGAAGAATGAATGGGGCAATACTATTTACCCCATTGTTCCTGGTCATGAAATCGTGGGCGAGGTAACCGAGGTTGGAAGCAAAGTAAAGAATTTCAAGGTCGGAGACAAAGTTGGCGTAGGATGTATGGTTGGATCCTGCCGCTCCTGTGATAATTGTTCCAACAACCTTGAGAACTATTGCCCCAAAATGATCCTCACCTACTCCAGCAAGGAATCCGACGGCTCCATAACCTACGGAGGCTACTCCGACTGTATGGTTGCCGATGAGCATTTCATTGTTCGCATTCCCGATAGCATCCCTCTGCACGCCGGGGCTCCCCTGCTTTGTGCCGGTATCACAGTTTACAGCCCTTTGAGATACTATGGACTTGACAAGCCTGGAATGCAAATTGGTGTGGTTGGTCTTGGTGGGCTTGGCCATGTAGCCGTCAAATTTGCTAAGGCCTTCGGCGCTAAGGTTACTGTGATTAGTACCTCGCCTAACAAGAAGCAGGAGGCTATTGAACGTCTTGGGGCTGATTCATTCTTGGTCAGCCGTGATCAAGAGCAAATGCAGGCTGCTAGGGGGACTTTGGACGGTATCATAGATACAGTCTCTGCTGCCCATCCCCTTCTTCCTCTGCTGTCTCTTATTAAAACACATGGAAAATTGGTTATGGTTGGTGCACCAGAGAAGCCACTGGAGATCCCAGCCTTTGCTCTTATTGGGGGTAGAAAAACAATGGCTGGTAGTTGCATTGGAGGGATGAAGGAAACACAAGAGATGATTGATTTTGCTGCCAAACACAACATAACTGCAGACGTTGAGCTGATTCCGATGGACGACGTCAATAAGGCAATGGAACGGATGCTGAAACAGGATGTCAAGTATCGATTCGTCATCGACATTGCTAACTCATTGAAGTCTAGCAGTTAA 1041 47.26 MGPIYLLAEVMQYVRWTPETGENDVAFKVLYCGICHSDLHMLKNEWGNTIYPIVPGHEIVGEVTEVGSKVKNFKVGDKVGVGCMVGSCRSCDNCSNNLENYCPKMILTYSSKESDGSITYGGYSDCMVADEHFIVRIPDSIPLHAGAPLLCAGITVYSPLRYYGLDKPGMQIGVVGLGGLGHVAVKFAKAFGAKVTVISTSPNKKQEAIERLGADSFLVSRDQEQMQAARGTLDGIIDTVSAAHPLLPLLSLIKTHGKLVMVGAPEKPLEIPAFALIGGRKTMAGSCIGGMKETQEMIDFAAKHNITADVELIPMDDVNKAMERMLKQDVKYRFVIDIANSLKSSS* 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4786533 4789009 + Chy2G030390.1 Chy02g00772 220220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00772 346 CDD CAD1 18 337 - -
Chy02g00772 346 PANTHER ALDEHYDE REDUCTASE 19 344 - -
Chy02g00772 346 PANTHER 8-HYDROXYGERANIOL DEHYDROGENASE-RELATED 19 344 - -
Chy02g00772 346 Gene3D - 152 308 - -
Chy02g00772 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 142 306 IPR036291 -
Chy02g00772 346 SMART PKS_ER_names_mod 9 336 IPR020843 GO:0016491
Chy02g00772 346 Pfam Zinc-binding dehydrogenase 179 302 IPR013149 -
Chy02g00772 346 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 56 70 IPR002328 GO:0008270|GO:0016491
Chy02g00772 346 Gene3D - 18 338 - -
Chy02g00772 346 Pfam Alcohol dehydrogenase GroES-like domain 23 136 IPR013154 -
Chy02g00772 346 SUPERFAMILY GroES-like 17 169 IPR011032 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00772 Chy-Chr2:4786533 Chy11g00067 Chy-Chr11:729780 3.29E-157 dispersed
Chy02g00772 Chy-Chr2:4786533 Chy06g01051 Chy-Chr6:8455836 3.32E-115 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00772 - K23232 csv:101222715 648.662