Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00797 ATGCGTCTTCTTCTTCTTCTTCTTCTTTGTCTTCTTCAGCTCCAACTCCACATTCATCATTCTCTTTCTGCTCGTGTTTCTGAGTACCGAGCCCTTCTCTCCCTCAAAACCTCCATTACCGGCGACCCCAAATCCTCACTCGCTTCCTGGAACGCCTCCACTAGTCATTGTACTTGGTTTGGGGTCACTTGCGATCTTCGTCGCCATGTCACTGCCCTAGATCTCACTGCTCTCGGTCTTTCTGGTTCTCTGTCCCCTGATGTTACTTTTTTAAGATTTCTCACTAATCTTTCTCTCGCTGCCAATGAGTTTTCTGGTCCCATCCCGCCGGAGCTTTCTTCAATCTCTTCACTTCGCCTCCTTAACTTGTCTAATAATGTTTTCGATGGGTCGTTCCCTTCACGGTTTTCGCAGCTGCAGAATCTGCACGTTCTTGATTTGTATAACAACAATATGACTGGAGATTTCCCCATTGTGGTCACTGAAATGTCGGGCCTCCGTCATTTGCATTTGGGAGGAAATTTCTTCGCCGGACGGATCCCGCCGGAAGTGGGTCGGATGCAGTCTTTGGAGTACTTGGCGGTTTCGGGTAACGAACTTAGCGGTTCGATACCGCCGGAGCTCGGAAACCTTACGAACCTTCGTGAGCTTTACATTGGCTACTTCAACGCCTACGACGGCGGTCTTCCAGCTGAGATTGGGAATTTGTCACAGTTGGTACGGTTGGACGCTGCGAACTGTGGACTGTCTGGCCGGATTCCTCCGGAGCTTGGAAAGTTGCAGAATCTCGATACTTTGTTTCTACAAGTTAATGCTCTATCTGGGCCATTAACGCCGGAGATTGGACAGTTGAACAGTTTGAAATCGTTGGATTTGTCGAACAATATGCTTGTGGGTGAGATTCCCGTCTCGTTCTCCCAGTTGAAGAACTTGACGCTGTTGAATCTGTTTAGAAACAAGTTACATGGGGCGATTCCTTCCTTTATTGGCGACTTGCCGAAGCTGGAGGTGTTGCAGTTATGGGAGAATAATTTCACGGAAGCCATTCCACAGAACCTGGGGAAGAACGGAATGCTTCAGATATTGGACCTTTCTTCCAATAAGCTGACTGGAACTCTTCCTCCCGACATGTGTTTTGGTAATCGGCTTCAAATTCTGATCGCATTGAGCAATTTCTTGTTTGGTCCAATCCCAGAGTCGCTAGGCAAATGCGTTTCCCTTAATCGTATTCGTATGGGAGAAAATTTTCTCAATGGATCCATTCCAAAGGGGCTTCTGAGTCTTCCCAAGCTCTCTCAGGTGGAGTTACAAGATAATTTCCTCTCCGGCGAGTTCCCAATAACCGATTCAATCTCATTGAATCTCGGCCAGATTAGTCTTTCCAACAACCGACTCACTGGGTCGATTCCGCCAACAATTGGCAACTTCTCCGGCGTCCAGAAACTACTCCTCGACGGAAACAAGTTTTCCGGTCAAATCCCACCTGAAATTGGGCGGTTACAGCAACTTTCGAAGATAGATTTCAGCAGCAACATGCTATCGGGTCCAATCGCGCCGGAGATTAGCCAATGCAAGCTTCTAACCTTCGTCGATCTCAGCCGAAACCAGCTCTCAGGAGAAATTCCAAACGAGATTACCAGTATGAGGATATTGAATTACCTGAATCTCTCAAAAAACCATTTAGTCGGTGGAATCCCTGCTACCATAGCCAGCATGCAGAGTTTAACCTCCGTGGATTTCTCATACAACAACCTCTCCGGTTTAGTTCCGGGAACTGGGCAATTCAGTTACTTCAATTACACATCGTTTCTCGGAAATCCTGATCTCTGCGGCCCATATTTGGGACCATGCAAAGATGGGGTTGCCAATAGTAATTACCAACAACATGTGAAGGGCCCTCTCTCTGCTTCCCTCAAGCTCCTCCTTGTAATTGGTCTGCTTCTTTGCTCCATTGCATTTGCAGTTGCTGCTATCATCAAAGCTCGATCCTTGAAGAGAGCCAGTGAGTCTCGGGCTTGGAAATTAACATCCTTCCAACGCTTAGATTTCACAGTTGATGATGATTCCGGCACTTCTGAGTGCATGTCTGCCATTGCTGGTTCTTATGGATATATTGCCCCAGAATACGCCTACACACTAAAAGTTGATGAGAAGAGTGACGTATATAGCTTTGGAGTTGTTCTGTTGGAACTTGTTAGTGGTAGAAAACCCGTTGGAGAATTTGGGGATGGTGTCGACATAGTTCAATGGGTTAGAAAAATGACAGACTCAAACAAGGAAGAGGTAGTGAAAATCCTTGATCCAAGGCTCTCCTCCGTGCCACTCCACGAAGTGATGCATGTCTTCTACGTTGCAATGCTATGTGTCGAGGAACAGGCAGTGGAGCGCCCAACAATGAGGGAAGTGATCCAAATCCTATCGGAGATTCCACAGCCACCAAGTTCAAAACAAGGAGGAGATTCAACACTCCCCAACTCGTCACCACCCCCACCACCAACAGCTGCAGATTTAGACCTTCCAACAACAGGAACCAAGAACAAAAAAGAACATCAGCAACAGCAACCGCCACCAGATCTTCTTAGCATTTGA 2589 47.08 MRLLLLLLLCLLQLQLHIHHSLSARVSEYRALLSLKTSITGDPKSSLASWNASTSHCTWFGVTCDLRRHVTALDLTALGLSGSLSPDVTFLRFLTNLSLAANEFSGPIPPELSSISSLRLLNLSNNVFDGSFPSRFSQLQNLHVLDLYNNNMTGDFPIVVTEMSGLRHLHLGGNFFAGRIPPEVGRMQSLEYLAVSGNELSGSIPPELGNLTNLRELYIGYFNAYDGGLPAEIGNLSQLVRLDAANCGLSGRIPPELGKLQNLDTLFLQVNALSGPLTPEIGQLNSLKSLDLSNNMLVGEIPVSFSQLKNLTLLNLFRNKLHGAIPSFIGDLPKLEVLQLWENNFTEAIPQNLGKNGMLQILDLSSNKLTGTLPPDMCFGNRLQILIALSNFLFGPIPESLGKCVSLNRIRMGENFLNGSIPKGLLSLPKLSQVELQDNFLSGEFPITDSISLNLGQISLSNNRLTGSIPPTIGNFSGVQKLLLDGNKFSGQIPPEIGRLQQLSKIDFSSNMLSGPIAPEISQCKLLTFVDLSRNQLSGEIPNEITSMRILNYLNLSKNHLVGGIPATIASMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGPCKDGVANSNYQQHVKGPLSASLKLLLVIGLLLCSIAFAVAAIIKARSLKRASESRAWKLTSFQRLDFTVDDDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVSGRKPVGEFGDGVDIVQWVRKMTDSNKEEVVKILDPRLSSVPLHEVMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPSSKQGGDSTLPNSSPPPPPTAADLDLPTTGTKNKKEHQQQQPPPDLLSI* 863
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4989498 4992932 + Chy2G030640.1 Chy02g00797 220245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00797 862 Pfam Leucine Rich Repeat 286 308 IPR001611 GO:0005515
Chy02g00797 862 Gene3D Ribonuclease Inhibitor 174 236 IPR032675 -
Chy02g00797 862 Gene3D Ribonuclease Inhibitor 26 173 IPR032675 -
Chy02g00797 862 MobiDBLite consensus disorder prediction 809 823 - -
Chy02g00797 862 Pfam Leucine rich repeat 117 174 IPR001611 GO:0005515
Chy02g00797 862 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Chy02g00797 862 SUPERFAMILY RNI-like 73 394 - -
Chy02g00797 862 Pfam Protein tyrosine and serine/threonine kinase 700 806 IPR001245 GO:0004672|GO:0006468
Chy02g00797 862 SUPERFAMILY L domain-like 301 617 - -
Chy02g00797 862 SUPERFAMILY Protein kinase-like (PK-like) 688 810 IPR011009 -
Chy02g00797 862 PANTHER UNNAMED PRODUCT 688 825 - -
Chy02g00797 862 PANTHER UNNAMED PRODUCT 2 687 - -
Chy02g00797 862 SMART LRR_typ_2 572 595 IPR003591 -
Chy02g00797 862 SMART LRR_typ_2 284 308 IPR003591 -
Chy02g00797 862 SMART LRR_typ_2 187 211 IPR003591 -
Chy02g00797 862 SMART LRR_typ_2 332 356 IPR003591 -
Chy02g00797 862 SMART LRR_typ_2 357 380 IPR003591 -
Chy02g00797 862 MobiDBLite consensus disorder prediction 846 862 - -
Chy02g00797 862 MobiDBLite consensus disorder prediction 809 862 - -
Chy02g00797 862 Gene3D Ribonuclease Inhibitor 356 621 IPR032675 -
Chy02g00797 862 PANTHER - 688 825 - -
Chy02g00797 862 PANTHER - 2 687 - -
Chy02g00797 862 Gene3D Transferase(Phosphotransferase) domain 1 663 820 - -
Chy02g00797 862 Gene3D Ribonuclease Inhibitor 241 354 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00797 Chy-Chr2:4989498 Chy04g00406 Chy-Chr4:3632517 0 dispersed
Chy02g00797 Chy-Chr2:4989498 Chy02g00798 Chy-Chr2:5001862 0 tandem
Chy03g00481 Chy-Chr3:6678815 Chy02g00797 Chy-Chr2:4989498 9.58E-129 transposed
Chy07g00474 Chy-Chr7:3776916 Chy02g00797 Chy-Chr2:4989498 2.53E-06 transposed
Chy02g00797 Chy-Chr2:4989498 Chy03g01278 Chy-Chr3:15810150 2.81E-20 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71048 PF07714 PK_Tyr_Ser-Thr 1.10E-09 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00797 - - csv:101219011 1275.0