Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00817 ATGAATAATGTTAATGGCAACAACTGTAACTGGCTAGGCTTCTCTGTCTCCCCTAACGTTAACATGGAGCTTTCTTCTTCTGCTGCTACTTCTGTCTCCCCTTCAATTCCTGCAAATCTTTTTCACTCCCCATCTCAGTTTAACTATGGCATTTGCTATGGTGTTGATGGAGAACATGGTGCCTTTTATTCACCATTGTCTGCCATGCCACTCAAGTCAGATGGTTCAATTTGTTCAATGGAAGCTCTCAGCAGGCAACATCCACAAGTGGTGAGTAGCTCTACTCCAAAACTAGAGGATTTCTTTGGTGGTGCAACTATGGGGTCCCATCACTATGAGAGTAATGACAGGGAAGCTATGGCTCTCAGTCTAGACAGCATATTTTGCCATCAAAACCCAACGCATGAGCCCAACAACCAATCCTTTGCCCATTTCTCATCCTTGAGAAGCCGTGAACTGATGCTACAAGACTCGAAGGTAATCCTGCCTGATGGGTGCAATCTGCAGCAGCAGCAGCAGCAACACCCAGCAGTAGCCCAGAGTGATATTTCTGGTATGAAGAATTGGGCTGTTCCTAGAAACTATGCTGCTACTAACAATGGTTCGTTCGAGCAGAAGATGGTGAGTTGCATGAGTGAAAATGGTGGTGAATCTGGTTCTATTAATGCCATGGCTTATGGAGATTTGCAGTCATTGAGCTTGTCTATGACTATGAGCCCCAGCTCTCAGTCAAGCTGTGTCACAGCCACGCAGCATGTCTCGCCTGCTATGACTGACTGTTCTGCTATGGATACAAAGAAAAGAGGCCATGAGAAGGTTGATCAAAAGCAAATTGTTCATAGGAAGTCTTTAGATACCTTTGGACAGAGAACCTCACAGTATAGAGGGGTTACAAGGCACAGATGGACGGGTAGGTATGAAGCACATTTATGGGACAACAGTTGCAAGAAAGAAGGTCAAAGCAGGAAGGGAAGACAAGTGTACCTCGGAGGTTATGATATGGAAGAAAAAGCCGCTAGAGCTTATGATCTTGCTGCACTCAAGTATTGGGGACCCTCCACCCACATTAACTTTCCTTTGGAAAACTATCAGAAAGAATTAGAGGAAATGAAAAACATGAGCAGGCAGGAATACGTTGCTCACCTGAGAAGAAGAAGCAGTGGGTTCTCGAGAGGGGCCTCGATATACCGAGGTGTAACAAGACATCATCAACATGGAAGATGGCAGGCTCGTATTGGCCGAGTTGCTGGTAACAAAGATCTCTATCTTGGGACATTCAGTACTCAAGAGGAAGCAGCTGAGGCCTATGACATAGCAGCCATAAAATTTCGAGGAATGAATGCCGTTACTAATTTTGATATCACGAGGTATGATGTTGAGCGGATCATTGCAAGCAATACCCTCCTAAGTGGGGATCTAGCTAAGAGAAAGCAACAGCCAGAGTTTGACAATGAATCAATCAGACAAAGCCCTCCTACTCACAGCAGCAATTCAGAAGCTATGACTCTGCCCTCACAGAGTAGTAGTCAAAGTGAATCAGACTGGAAGATGGCTCTTTATCATTCCTCACAACAGCTCATTCCAAAGCCACGAATGCTGTCTGCGATAAATGACGATGGATCACAACTCGGTGTTGAAGATTCTGCCAGAATGGGAGCTCATTTCTCCAATGCATCTTCAATGGTTACTAGCTGCAGCTTGAGCAGCTCAAGGGAGGAGAGTCCAGACAAGACAAGCCTTTCGATGGTGTTCGGAATGCCTCAATCGACATCTAAGCCATTTGCTACCTCAGCTAATAATATGAACACCTCCTGGATTGCATCTGCCCAGCAGATAAGGGCAGCAAGTTGTATGAGCCAGTTGCCAGTTTTTGCTGCCTGGACTGATACTTAA 1893 45.43 MNNVNGNNCNWLGFSVSPNVNMELSSSAATSVSPSIPANLFHSPSQFNYGICYGVDGEHGAFYSPLSAMPLKSDGSICSMEALSRQHPQVVSSSTPKLEDFFGGATMGSHHYESNDREAMALSLDSIFCHQNPTHEPNNQSFAHFSSLRSRELMLQDSKVILPDGCNLQQQQQQHPAVAQSDISGMKNWAVPRNYAATNNGSFEQKMVSCMSENGGESGSINAMAYGDLQSLSLSMTMSPSSQSSCVTATQHVSPAMTDCSAMDTKKRGHEKVDQKQIVHRKSLDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQKELEEMKNMSRQEYVAHLRRRSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGMNAVTNFDITRYDVERIIASNTLLSGDLAKRKQQPEFDNESIRQSPPTHSSNSEAMTLPSQSSSQSESDWKMALYHSSQQLIPKPRMLSAINDDGSQLGVEDSARMGAHFSNASSMVTSCSLSSSREESPDKTSLSMVFGMPQSTSKPFATSANNMNTSWIASAQQIRAASCMSQLPVFAAWTDT* 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5154355 5157461 - Chy2G030840.1 Chy02g00817 220265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00817 630 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 8 628 - -
Chy02g00817 630 SUPERFAMILY DNA-binding domain 292 361 IPR016177 GO:0003677
Chy02g00817 630 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 8 628 - -
Chy02g00817 630 MobiDBLite consensus disorder prediction 484 514 - -
Chy02g00817 630 SUPERFAMILY DNA-binding domain 394 454 IPR016177 GO:0003677
Chy02g00817 630 SMART rav1_2 293 365 IPR001471 GO:0003700|GO:0006355
Chy02g00817 630 SMART rav1_2 395 459 IPR001471 GO:0003700|GO:0006355
Chy02g00817 630 Pfam AP2 domain 395 445 IPR001471 GO:0003700|GO:0006355
Chy02g00817 630 Pfam AP2 domain 293 351 IPR001471 GO:0003700|GO:0006355
Chy02g00817 630 ProSiteProfiles AP2/ERF domain profile. 293 359 IPR001471 GO:0003700|GO:0006355
Chy02g00817 630 Gene3D AP2/ERF domain 395 455 IPR036955 GO:0003700|GO:0006355
Chy02g00817 630 Gene3D AP2/ERF domain 292 361 IPR036955 GO:0003700|GO:0006355
Chy02g00817 630 CDD AP2 292 359 IPR001471 GO:0003700|GO:0006355
Chy02g00817 630 ProSiteProfiles AP2/ERF domain profile. 395 453 IPR001471 GO:0003700|GO:0006355
Chy02g00817 630 Coils Coil 360 380 - -
Chy02g00817 630 CDD AP2 394 455 IPR001471 GO:0003700|GO:0006355
Chy02g00817 630 PRINTS Ethylene responsive element binding protein signature 435 455 IPR001471 GO:0003700|GO:0006355
Chy02g00817 630 PRINTS Ethylene responsive element binding protein signature 294 305 IPR001471 GO:0003700|GO:0006355
Chy02g00817 630 MobiDBLite consensus disorder prediction 474 514 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00817 Chy-Chr2:5154355 Chy04g00696 Chy-Chr4:8352238 1.45E-129 dispersed
Chy02g02151 Chy-Chr2:25737097 Chy02g00817 Chy-Chr2:5154355 5.72E-10 dispersed
Chy10g01211 Chy-Chr10:16828954 Chy02g00817 Chy-Chr2:5154355 2.71E-86 dispersed
Chy02g02231 Chy-Chr2:26384687 Chy02g00817 Chy-Chr2:5154355 2.11E-09 transposed
Chy05g00119 Chy-Chr5:911728 Chy02g00817 Chy-Chr2:5154355 2.21E-118 transposed
Chy05g00712 Chy-Chr5:9314823 Chy02g00817 Chy-Chr2:5154355 5.78E-119 transposed
Chy06g01597 Chy-Chr6:18383126 Chy02g00817 Chy-Chr2:5154355 5.54E-114 transposed
Chy02g00817 Chy-Chr2:5154355 Chy03g01615 Chy-Chr3:18090114 0 wgd
Chy02g00817 Chy-Chr2:5154355 Chy07g00211 Chy-Chr7:1699930 4.09E-170 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17486 PF00847 AP2 1.20E-13 CL0081 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00817 K09285 - csv:101203323 1201.42