Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00881 ATGCAAATTTACTCTCTGCTTTACCTATTTCTCTCCCTTATCTCTCTCCTCTTCGCTTTCAACCTCCGCACCCGCCGTAGAAACTTACCCCCCAGTCCCCCGTCTCTCCCCATCATCGGCCACCTCCATTACCTCAAAATCCCCCATCACCAAACTTTACAGAAACTCTCTGCGCAATACGGACCAGTAATTTCTCTCTGGCTTGGATCTCGCCTCGTTGTGGTCGTCTCGTCGTTACCGGCAGTGGAGGAGTGCTTCACTAAGAACGACATTGTTTTAGCCAACCGTCCTCGGTTGCTAGTCGGGAAACACATCAGCTACAACTACACTACGATGGTATCGTCACCTTATGGAAACCACTGGCGGAACCTCCGCCGAATCGGCGCCATCGAGATCTTTTCAGCGTCTCGCCTCAATAAATTCGCAGGAACCCGGAAGGATGAAGTGGAACGGTTACTGAAGAAGCTATCGAGGAATTCGATAAATGGATTCTCGAAAGTAGAGATGCAGTCAGCGATTTCGGAACGGACGTTTAACATATCGATGAGAATGGCGGCAGGAAAGAGGTATTTCGGTGAGGAAGTGAGGGATGTGGAGGAAGCGAGAGAGTCGAGAGAGCTGATTAAACAGATCGTGTCGATGGGAGGAGTATCGTATCCGGGAGATTTCATTCCGATGATGAATTGGATCCCGAATGGATTTAAGAGGAAGGTTTGGAGAGTTGCGAAGAGGATGGACGCGTTTCTGCAGGGATTGATTGATGAACATCGGAGCAATAAGGAAGAAGAAAGGAACACGGTGATCGATCATTTGCTATGTCAGCAGGAAATGGAGCCTGAGTACTATGGAGATGAAATAATCAAAGGAATTGTTCTGTTACTACTAGCAGGAGCAGATACTTCAGCTGTGACAATTGAATGGATTCTAGCTCACTTGCTCAACAATCCAGAGGTACTAAAAAAGGCTAGAGAAGAGCTAGACGCTCAAATTGGAGAAAAACGACTAGTAGAAGAATCGGATATCCCCAAGTTACCATATCTTCAAGGAATTATCTCTGAGACTCTTCGATTGAACCCAACTGCTCCAATGTTAGTGCCACATCTAACCTCTAATGATTGTACAATCAGCGGGTACAAAATACCACGTGACACAATTGTATTGGTAAATGCATGGGCTATCCATAGAGACCCTAATCAATGGGAAGAACCCACACTATTCAAACCAGAAAGACACCAGAAGTCAGAATCAATTGATCATCATCAAATCCCAAAGTTGATTCCATTTGGAGTCGGACGAAGAGCTTGCCCTGGCTCGGGCATGGCTCAACGAGTGGTGGGATTGACTCTAGCAGCTTTAATTCAATGCTACGAGTGGGAAAGGATTGGTGAAGAGAAAGTGGACATGGCAGAAGGAAGAGGAGCCACTATGCCCAAGGTGTTGCCATTGGAAGCTATGTGCAAACCTCGCTCTATCATCCACAACATTTTTAACTGA 1494 46.39 MQIYSLLYLFLSLISLLFAFNLRTRRRNLPPSPPSLPIIGHLHYLKIPHHQTLQKLSAQYGPVISLWLGSRLVVVVSSLPAVEECFTKNDIVLANRPRLLVGKHISYNYTTMVSSPYGNHWRNLRRIGAIEIFSASRLNKFAGTRKDEVERLLKKLSRNSINGFSKVEMQSAISERTFNISMRMAAGKRYFGEEVRDVEEARESRELIKQIVSMGGVSYPGDFIPMMNWIPNGFKRKVWRVAKRMDAFLQGLIDEHRSNKEEERNTVIDHLLCQQEMEPEYYGDEIIKGIVLLLLAGADTSAVTIEWILAHLLNNPEVLKKAREELDAQIGEKRLVEESDIPKLPYLQGIISETLRLNPTAPMLVPHLTSNDCTISGYKIPRDTIVLVNAWAIHRDPNQWEEPTLFKPERHQKSESIDHHQIPKLIPFGVGRRACPGSGMAQRVVGLTLAALIQCYEWERIGEEKVDMAEGRGATMPKVLPLEAMCKPRSIIHNIFN* 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5676957 5680088 + Chy2G031480.1 Chy02g00881 220329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00881 497 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00881 497 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00881 497 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00881 497 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00881 497 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 494 - -
Chy02g00881 497 SUPERFAMILY Cytochrome P450 30 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00881 497 Pfam Cytochrome P450 30 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00881 497 Coils Coil 319 339 - -
Chy02g00881 497 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 4 494 - -
Chy02g00881 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Chy02g00881 497 Gene3D Cytochrome P450 19 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00881 497 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00881 497 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00881 497 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00881 497 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00881 497 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00881 497 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00881 497 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00881 497 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00881 497 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00877 Chy-Chr2:5651461 Chy02g00881 Chy-Chr2:5676957 0 dispersed
Chy02g00879 Chy-Chr2:5666584 Chy02g00881 Chy-Chr2:5676957 2.86E-46 dispersed
Chy02g00881 Chy-Chr2:5676957 Chy11g01853 Chy-Chr11:24799711 0 dispersed
Chy02g00880 Chy-Chr2:5673699 Chy02g00881 Chy-Chr2:5676957 1.05E-179 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00881 K13260 - csv:101215922 908.286