Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy02g00892 | ATGGATAATGGAACTTCTAATAGTTCAACACAATCTGCAGTCAACAATTCAGCTCCAACAGTTGATAACCAAAGTAGTAAAGTAGATAATTTGACATCTATTTTATCTACGTCCGGCATATCATCTTGGGCTAAGAGTTTTAGAAATCCACAACCACCTGAAGCAGCAAAAAATAATGACTCTAACCCAGGAAATTCTGGGATGTCAGCAATTGCTCGTTTTAGTAACGGATTTGGATTCCAGATACCTACAATGTCTTCTGTACAAGGTGATGGTGCTGCAGACACCAAATCTGGGATGAAATCTGGTGTATTTGAATCATTAACAAAAGGTTTAGTCGACACATCTCAGAATGCGGTAAAGGCTATGCAAGTAAAGGCACGCCATATGGTCTCTCAGAACAAGCGAAGATATCAGGAAGGAGAATTTGATTTGGATTTGACGTATATCACTGAAAACATAATTGCTATGGGGTTTCCTGCTGGTCACATGAGCTCTGGTCTCTTCGGATTCCTTGAGGGATTTTACAGAAATCATATGGAAGAAGTGATCAAATTTTTTGAAACTCATCATAAGGGAAAATACAAAGTTTACAATCTTTGTTCAGAGCGTTTGTATGATGCCTCATTATTTGAGGGGAAGGTTGCACATTTCCCATTTGATGATCATAACTGTCCTCCTATCCATCTCATAAAATCATTTTGTCAAAGTGCATATACATGGTTGAAGGACGATATCGAGAACGTGGTTGTTGTTCATTGTAAAGCTGGTATGGCAAGAACAGGGCTAATGATTTGCAGCCTCCTTTTATTCCTAAAGTTCTTCCAAACATCACCAGAGGCAATTGACTATTTCAATCAGAAAAGATGCGTGGATGGGAAGGCTTTGGTTCTTCCTAGCCAGATTAGGTATGTCAAGCATTTTGAGCGCATTTTAACACAATTCAACGGAAAAACTCCACCAGGACGGAGGTGCATGCTGAGAGGTTTTCGGCTTCACAAGTGCCCGTATTGGGTCAGGCCTTCCATTACAATATCAAATCACAGTGAGATTTTGTTCTCAACAAAAAAGCATCAGAAGACAAAGGATTTAATGCCAGAAGATTTCTGGATTAGGGCACCAAGGAAAGTATTTGTGGTCTTTGCACTGCCAGGTGAGCCTGGTTTGACAGAGTTGTCAGGGGACTTCAAGATTCATTTTCATGACCGGCATGGGGATTTTTACTGTTGGTTAAACACAACAATGACAGAAAACAAAGTATTATTAAGTGACACGGATCTTGATGGTTTTGATAAGAGAAAACTCCCAACTCCTGGATTTCAAGTCGAAGTTGTGATGATAGACTATGATGGTTCTTTGCCAGCACGATTGAAAACTGATTCAGCTGGCAAAGGATCCGATCGTCGCTCTATTCACAACCGAGCCTCAGGTCATGAAGCAGGACAATCCAACTCAAACAAAATGTCCGAAGGTGAAGAAAACGATGACAACGTATTCTCTGATAGTGACGAAGAAAATGGTGACATAAAAACCAGTCTAACTCAATCAACTTCTGGAAATGGAAATGGAAATTCAAAAGCTGACCATTCATCAACAACAATTTCCTCTGAAAGAATTGGGAGTTTAGCTCATGAAACTAGTCATTTATCCTTCGGAAATGAGAAAAACTCACAACCTAATGCTCCAAAAGGACCTGCCGTGATACAACCATCAGGCCTTGAGATCCCAAATTTGGATTCAGTAGGAGCAAGTGATTTCAAGGCAATAGCTGCTGATGCGTCAGTTTTCACGTTTGGGGATGAAGAAGACTTTGATAGTGAATGA | 1824 | 40.19 | MDNGTSNSSTQSAVNNSAPTVDNQSSKVDNLTSILSTSGISSWAKSFRNPQPPEAAKNNDSNPGNSGMSAIARFSNGFGFQIPTMSSVQGDGAADTKSGMKSGVFESLTKGLVDTSQNAVKAMQVKARHMVSQNKRRYQEGEFDLDLTYITENIIAMGFPAGHMSSGLFGFLEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVAHFPFDDHNCPPIHLIKSFCQSAYTWLKDDIENVVVVHCKAGMARTGLMICSLLLFLKFFQTSPEAIDYFNQKRCVDGKALVLPSQIRYVKHFERILTQFNGKTPPGRRCMLRGFRLHKCPYWVRPSITISNHSEILFSTKKHQKTKDLMPEDFWIRAPRKVFVVFALPGEPGLTELSGDFKIHFHDRHGDFYCWLNTTMTENKVLLSDTDLDGFDKRKLPTPGFQVEVVMIDYDGSLPARLKTDSAGKGSDRRSIHNRASGHEAGQSNSNKMSEGEENDDNVFSDSDEENGDIKTSLTQSTSGNGNGNSKADHSSTTISSERIGSLAHETSHLSFGNEKNSQPNAPKGPAVIQPSGLEIPNLDSVGASDFKAIAADASVFTFGDEEDFDSE* | 608 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 5753818 | 5757628 | - | Chy2G031590.1 | Chy02g00892 | 220340 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy02g00892 | 607 | MobiDBLite | consensus disorder prediction | 548 | 572 | - | - | |
Chy02g00892 | 607 | MobiDBLite | consensus disorder prediction | 43 | 68 | - | - | |
Chy02g00892 | 607 | PANTHER | PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B | 5 | 607 | - | - | |
Chy02g00892 | 607 | ProSiteProfiles | C2 tensin-type domain profile. | 322 | 449 | IPR014020 | - | |
Chy02g00892 | 607 | MobiDBLite | consensus disorder prediction | 458 | 536 | - | - | |
Chy02g00892 | 607 | CDD | PTP_PTEN | 146 | 311 | IPR045101 | GO:0016791 | |
Chy02g00892 | 607 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 250 | 289 | IPR000387 | GO:0016311|GO:0016791 | |
Chy02g00892 | 607 | MobiDBLite | consensus disorder prediction | 548 | 564 | - | - | |
Chy02g00892 | 607 | SMART | PTEN_C2_2 | 320 | 448 | IPR014020 | - | |
Chy02g00892 | 607 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 136 | 315 | IPR029023 | - | |
Chy02g00892 | 607 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 5 | 607 | - | - | |
Chy02g00892 | 607 | MobiDBLite | consensus disorder prediction | 461 | 475 | - | - | |
Chy02g00892 | 607 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 149 | 314 | IPR029021 | - | |
Chy02g00892 | 607 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 252 | 262 | IPR016130 | GO:0016311|GO:0016791 | |
Chy02g00892 | 607 | MobiDBLite | consensus disorder prediction | 509 | 536 | - | - | |
Chy02g00892 | 607 | Gene3D | Protein tyrosine phosphatase superfamily | 121 | 318 | IPR029021 | - | |
Chy02g00892 | 607 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g00892 | Chy-Chr2:5753818 | Chy04g01571 | Chy-Chr4:22279642 | 6.67E-43 | dispersed | |
Chy01g00080 | Chy-Chr1:535322 | Chy02g00892 | Chy-Chr2:5753818 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy02g00892 | K01110 | - | csv:101213277 | 1210.28 |