Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00892 ATGGATAATGGAACTTCTAATAGTTCAACACAATCTGCAGTCAACAATTCAGCTCCAACAGTTGATAACCAAAGTAGTAAAGTAGATAATTTGACATCTATTTTATCTACGTCCGGCATATCATCTTGGGCTAAGAGTTTTAGAAATCCACAACCACCTGAAGCAGCAAAAAATAATGACTCTAACCCAGGAAATTCTGGGATGTCAGCAATTGCTCGTTTTAGTAACGGATTTGGATTCCAGATACCTACAATGTCTTCTGTACAAGGTGATGGTGCTGCAGACACCAAATCTGGGATGAAATCTGGTGTATTTGAATCATTAACAAAAGGTTTAGTCGACACATCTCAGAATGCGGTAAAGGCTATGCAAGTAAAGGCACGCCATATGGTCTCTCAGAACAAGCGAAGATATCAGGAAGGAGAATTTGATTTGGATTTGACGTATATCACTGAAAACATAATTGCTATGGGGTTTCCTGCTGGTCACATGAGCTCTGGTCTCTTCGGATTCCTTGAGGGATTTTACAGAAATCATATGGAAGAAGTGATCAAATTTTTTGAAACTCATCATAAGGGAAAATACAAAGTTTACAATCTTTGTTCAGAGCGTTTGTATGATGCCTCATTATTTGAGGGGAAGGTTGCACATTTCCCATTTGATGATCATAACTGTCCTCCTATCCATCTCATAAAATCATTTTGTCAAAGTGCATATACATGGTTGAAGGACGATATCGAGAACGTGGTTGTTGTTCATTGTAAAGCTGGTATGGCAAGAACAGGGCTAATGATTTGCAGCCTCCTTTTATTCCTAAAGTTCTTCCAAACATCACCAGAGGCAATTGACTATTTCAATCAGAAAAGATGCGTGGATGGGAAGGCTTTGGTTCTTCCTAGCCAGATTAGGTATGTCAAGCATTTTGAGCGCATTTTAACACAATTCAACGGAAAAACTCCACCAGGACGGAGGTGCATGCTGAGAGGTTTTCGGCTTCACAAGTGCCCGTATTGGGTCAGGCCTTCCATTACAATATCAAATCACAGTGAGATTTTGTTCTCAACAAAAAAGCATCAGAAGACAAAGGATTTAATGCCAGAAGATTTCTGGATTAGGGCACCAAGGAAAGTATTTGTGGTCTTTGCACTGCCAGGTGAGCCTGGTTTGACAGAGTTGTCAGGGGACTTCAAGATTCATTTTCATGACCGGCATGGGGATTTTTACTGTTGGTTAAACACAACAATGACAGAAAACAAAGTATTATTAAGTGACACGGATCTTGATGGTTTTGATAAGAGAAAACTCCCAACTCCTGGATTTCAAGTCGAAGTTGTGATGATAGACTATGATGGTTCTTTGCCAGCACGATTGAAAACTGATTCAGCTGGCAAAGGATCCGATCGTCGCTCTATTCACAACCGAGCCTCAGGTCATGAAGCAGGACAATCCAACTCAAACAAAATGTCCGAAGGTGAAGAAAACGATGACAACGTATTCTCTGATAGTGACGAAGAAAATGGTGACATAAAAACCAGTCTAACTCAATCAACTTCTGGAAATGGAAATGGAAATTCAAAAGCTGACCATTCATCAACAACAATTTCCTCTGAAAGAATTGGGAGTTTAGCTCATGAAACTAGTCATTTATCCTTCGGAAATGAGAAAAACTCACAACCTAATGCTCCAAAAGGACCTGCCGTGATACAACCATCAGGCCTTGAGATCCCAAATTTGGATTCAGTAGGAGCAAGTGATTTCAAGGCAATAGCTGCTGATGCGTCAGTTTTCACGTTTGGGGATGAAGAAGACTTTGATAGTGAATGA 1824 40.19 MDNGTSNSSTQSAVNNSAPTVDNQSSKVDNLTSILSTSGISSWAKSFRNPQPPEAAKNNDSNPGNSGMSAIARFSNGFGFQIPTMSSVQGDGAADTKSGMKSGVFESLTKGLVDTSQNAVKAMQVKARHMVSQNKRRYQEGEFDLDLTYITENIIAMGFPAGHMSSGLFGFLEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVAHFPFDDHNCPPIHLIKSFCQSAYTWLKDDIENVVVVHCKAGMARTGLMICSLLLFLKFFQTSPEAIDYFNQKRCVDGKALVLPSQIRYVKHFERILTQFNGKTPPGRRCMLRGFRLHKCPYWVRPSITISNHSEILFSTKKHQKTKDLMPEDFWIRAPRKVFVVFALPGEPGLTELSGDFKIHFHDRHGDFYCWLNTTMTENKVLLSDTDLDGFDKRKLPTPGFQVEVVMIDYDGSLPARLKTDSAGKGSDRRSIHNRASGHEAGQSNSNKMSEGEENDDNVFSDSDEENGDIKTSLTQSTSGNGNGNSKADHSSTTISSERIGSLAHETSHLSFGNEKNSQPNAPKGPAVIQPSGLEIPNLDSVGASDFKAIAADASVFTFGDEEDFDSE* 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5753818 5757628 - Chy2G031590.1 Chy02g00892 220340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00892 607 MobiDBLite consensus disorder prediction 548 572 - -
Chy02g00892 607 MobiDBLite consensus disorder prediction 43 68 - -
Chy02g00892 607 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B 5 607 - -
Chy02g00892 607 ProSiteProfiles C2 tensin-type domain profile. 322 449 IPR014020 -
Chy02g00892 607 MobiDBLite consensus disorder prediction 458 536 - -
Chy02g00892 607 CDD PTP_PTEN 146 311 IPR045101 GO:0016791
Chy02g00892 607 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 250 289 IPR000387 GO:0016311|GO:0016791
Chy02g00892 607 MobiDBLite consensus disorder prediction 548 564 - -
Chy02g00892 607 SMART PTEN_C2_2 320 448 IPR014020 -
Chy02g00892 607 ProSiteProfiles Phosphatase tensin-type domain profile. 136 315 IPR029023 -
Chy02g00892 607 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 5 607 - -
Chy02g00892 607 MobiDBLite consensus disorder prediction 461 475 - -
Chy02g00892 607 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 149 314 IPR029021 -
Chy02g00892 607 ProSitePatterns Tyrosine specific protein phosphatases active site. 252 262 IPR016130 GO:0016311|GO:0016791
Chy02g00892 607 MobiDBLite consensus disorder prediction 509 536 - -
Chy02g00892 607 Gene3D Protein tyrosine phosphatase superfamily 121 318 IPR029021 -
Chy02g00892 607 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00892 Chy-Chr2:5753818 Chy04g01571 Chy-Chr4:22279642 6.67E-43 dispersed
Chy01g00080 Chy-Chr1:535322 Chy02g00892 Chy-Chr2:5753818 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00892 K01110 - csv:101213277 1210.28