Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00896 ATGGCCGTGGACCTCATCTCCCACCTTTCCCCACTCCCCACTATGGAACCCAACGCCGTCCAAGAAGCCACTTCCGGCCTCGAAAGCGTCCACAAACTCATCCGATTACTCTCCATTCCCAATCCCCATTCCTTACCTTCCTCCACTCAATCCCCAATCGATTTCCCTACCGACTGCCGTGCCGCCGCCGACGCTGCCGTCTCCAAGTTCAAAAAGGTCATTTCCCTCCTCGGCCGTAGCCGTCTCGGCCACGCTCGCTTCCGCAGAGCTCCTCTGCCTCAACAACCTCGTTACGTTACTCCCATCCAGCAGATCCCACCCCATCCCCATCTTAATAACAACAACAACATCAACGATGAGTCTCTTAATTTCTCCGCTCATAATTCCTTCATTTCTTCGTTGACTGGCGACGCCGATACCAAACATCCATCTTCCTCTTCCTCGCCTTTTCTCATTTCCAACCTCTCCCAGGTCTCCTCTGCTGGGAAGCCCCCTATTTCTAGTTCTTCCCTTAAGAGGAAGTGCAGCTCCGAAAACTTGAGATCCGGCAAGTGCGCCGCTGCTTCTTCCTCTTCTCGATGTCACTGTTCCAAGAAGAGAAAATTGAGGGTGAAGAGAGTGGTGAGAGTTCCGGCAATAAGCTTGAAAATGGCGGACATCCCACCGGACGATTATTCATGGAGGAAATATGGTCAAAAGCCCATTAAAGGCTCTCCACATCCCAGGGGTTATTACAAGTGTAGCAGTGTAAGAGGTTGTCCAGCCCGGAAACACGTAGAACGGGCCGTAGACGATCCGGCGATGCTAGTGGTGACTTACGAAGGAGAACACAATCACACCCTCTCTCTCCCCGAAACCTCTACTCTCATCCTCGAGTCCTCATAG 885 52.43 MAVDLISHLSPLPTMEPNAVQEATSGLESVHKLIRLLSIPNPHSLPSSTQSPIDFPTDCRAAADAAVSKFKKVISLLGRSRLGHARFRRAPLPQQPRYVTPIQQIPPHPHLNNNNNINDESLNFSAHNSFISSLTGDADTKHPSSSSSPFLISNLSQVSSAGKPPISSSSLKRKCSSENLRSGKCAAASSSSRCHCSKKRKLRVKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAVDDPAMLVVTYEGEHNHTLSLPETSTLILESS* 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5782349 5783408 + Chy2G031630.1 Chy02g00896 220344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00896 294 SMART WRKY_cls 221 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy02g00896 294 Pfam WRKY DNA -binding domain 223 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy02g00896 294 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 11 294 - -
Chy02g00896 294 Pfam Plant zinc cluster domain 172 219 IPR018872 -
Chy02g00896 294 ProSiteProfiles WRKY domain profile. 216 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy02g00896 294 Gene3D WRKY domain 207 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy02g00896 294 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 11 294 IPR044810 GO:0003700
Chy02g00896 294 SUPERFAMILY WRKY DNA-binding domain 218 280 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00896 Chy-Chr2:5782349 Chy05g00406 Chy-Chr5:4332849 4.73E-56 dispersed
Chy02g02263 Chy-Chr2:26712048 Chy02g00896 Chy-Chr2:5782349 2.13E-67 transposed
Chy04g00294 Chy-Chr4:2650264 Chy02g00896 Chy-Chr2:5782349 1.89E-12 transposed
Chy11g00548 Chy-Chr11:6055556 Chy02g00896 Chy-Chr2:5782349 8.62E-109 transposed
Chy02g00896 Chy-Chr2:5782349 Chy07g00148 Chy-Chr7:1276049 1.01E-11 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17497 PF03106 WRKY 3.60E-26 CL0274 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00896 - - csv:101214001 532.332