Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00901 ATGTGGGATCTGAACGATTGGCCTGATGTTAGGGAGGAGGATGAATGTTCCTCCGCCAAGACATCCATTGAAGGTGAAGGAGATGAGGAAAAAGGGAAAAGAGTGGGATCGCTTTCCAATTCAAGCTCTTCCGCTGTGGTTATGGAAGAAGAGGAAGTCGAAGTCCAAGGTGGTTCCGATGAAGAGGAACCCACCCCCATGGTTACTCACCAGTTTTTCCCACTCGAAGAAACTGAAATCCCAACTCCCCTTCCACATGCTTCTGCCCCTCCCGCTGCCGCTCCCGCCTTCCCTCGGGCTCACTGGGTTGGGGTCAAATTTGCCCATCCCGATCCTCTCGCCGCCCTTCCTAATAATTCTTTAACCCCCACCGACCTCTCTCACCCCATTAAAAAGAGCCGCCGCGGCCCAAGGTCCCGTAGCTCCCAGTACCGCGGCGTCACTTTCTACCGGAGAACCGGCCGTTGGGAGTCACATATTTGGGATTGTGGAAAGCAAGTCTATCTCGGTGGATTCGATACAGCACATGCAGCTGCTCGTGCTTACGATAGGGCGGCGATTAAATTCCGAGGGGTAGAAGCAGACATAAACTTCAGCATCGAAGATTACGAAGACGATTTAAAACAGATGGGAAATCTAACAAAGGAAGAATTTGTGCATGTACTTCGCCGACAAAGCACTGGGTTCCCCAGAGGGAGCTCCAAATATAGAGGCGTTACGCTTCATAAGTGTGGAAGATGGGAAGCTCGAATGGGCCAATTTCTTGGCAAAAAGTATGTTTATTTGGGTTTGTTTGATACGGAGATTGAAGCAGCAAGGGCTTATGATAAAGCTGCAATCAAGTGTAATGGCAAAGAAGCTGTCACCAATTTCGACCCCAGCATCTACGAGAATGAACTGAATCCGACAACTGAATCAAGTAGCAATTTGGGGGATCATAGTCTTGATTTAAGTTTAGGAAATTCAAGCTCAAAGCAAAACGACAGCTCAAATAATGGTTCCATAGGTCCACAACACCATTCTTCTTCTTCTTCTTCAGCTGATTGGCAACGCAATCACGGATTTAGGCCTCTTCAGCTAAATTTGGAAAATGGAGGAGGTGGAAACAAGAATTACAATAATAATGTAGAGAGAAGGAATAGGTACCTGGAGAGTGAAACCATGCAGCTGCTGAGCCAAACACACATTCAATCTCCAGCTCAATTCAGCCGCCCGCACACGGTCGGTGGTTTACCAGATCATCACCCCCACTCCCAAATATTGCTTCACAATCACAATAATCAAACCTTCAATTATCAAATTGAGTTTTCAGGCAGCAGTAATGGTCATGGAGGCCGAATAGTAGGAAGTGATCTAACATTATCTTTAAATGATCATCTTCAATCGGGGCCATCTCAAGTTCTTGCAAGTGCTGCAGCATCATCAGGATTCGCACCCCAGATTAGACCTTCCAAAAATTGGCTGCACAACAATGGCTTTCATTGTCTTATGAGACCCTCTTGA 1503 46.91 MWDLNDWPDVREEDECSSAKTSIEGEGDEEKGKRVGSLSNSSSSAVVMEEEEVEVQGGSDEEEPTPMVTHQFFPLEETEIPTPLPHASAPPAAAPAFPRAHWVGVKFAHPDPLAALPNNSLTPTDLSHPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFSIEDYEDDLKQMGNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYENELNPTTESSSNLGDHSLDLSLGNSSSKQNDSSNNGSIGPQHHSSSSSSADWQRNHGFRPLQLNLENGGGGNKNYNNNVERRNRYLESETMQLLSQTHIQSPAQFSRPHTVGGLPDHHPHSQILLHNHNNQTFNYQIEFSGSSNGHGGRIVGSDLTLSLNDHLQSGPSQVLASAAASSGFAPQIRPSKNWLHNNGFHCLMRPS* 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5833655 5836228 + Chy2G031680.1 Chy02g00901 220349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00901 500 MobiDBLite consensus disorder prediction 1 35 - -
Chy02g00901 500 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR TOE3 1 480 - -
Chy02g00901 500 CDD AP2 234 294 IPR001471 GO:0003700|GO:0006355
Chy02g00901 500 SUPERFAMILY DNA-binding domain 142 200 IPR016177 GO:0003677
Chy02g00901 500 Pfam AP2 domain 234 283 IPR001471 GO:0003700|GO:0006355
Chy02g00901 500 Pfam AP2 domain 143 191 IPR001471 GO:0003700|GO:0006355
Chy02g00901 500 PRINTS Ethylene responsive element binding protein signature 236 247 IPR001471 GO:0003700|GO:0006355
Chy02g00901 500 PRINTS Ethylene responsive element binding protein signature 274 294 IPR001471 GO:0003700|GO:0006355
Chy02g00901 500 MobiDBLite consensus disorder prediction 1 65 - -
Chy02g00901 500 ProSiteProfiles AP2/ERF domain profile. 235 292 IPR001471 GO:0003700|GO:0006355
Chy02g00901 500 Gene3D AP2/ERF domain 234 293 IPR036955 GO:0003700|GO:0006355
Chy02g00901 500 Gene3D AP2/ERF domain 142 201 IPR036955 GO:0003700|GO:0006355
Chy02g00901 500 SUPERFAMILY DNA-binding domain 234 294 IPR016177 GO:0003677
Chy02g00901 500 SMART rav1_2 143 205 IPR001471 GO:0003700|GO:0006355
Chy02g00901 500 SMART rav1_2 235 298 IPR001471 GO:0003700|GO:0006355
Chy02g00901 500 MobiDBLite consensus disorder prediction 116 143 - -
Chy02g00901 500 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 480 - -
Chy02g00901 500 ProSiteProfiles AP2/ERF domain profile. 143 199 IPR001471 GO:0003700|GO:0006355
Chy02g00901 500 CDD AP2 143 198 IPR001471 GO:0003700|GO:0006355
Chy02g00901 500 MobiDBLite consensus disorder prediction 299 351 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g00901 Chy11g00229 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00901 Chy-Chr2:5833655 Chy08g00813 Chy-Chr8:15713566 6.72E-11 dispersed
Chy11g00229 Chy-Chr11:2147611 Chy02g00901 Chy-Chr2:5833655 6.75E-131 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17499 PF00847 AP2 3.40E-10 CL0081 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00901 K09284 - csv:101214724 901.353