Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00904 ATGTCTGATCACAAATCAGGCTCCATGGCCGATCAGCTCTCCAAGCAGACCTCTATTTTTGGTCTACGCTTGTGGGTCGTTCTTGGGGTTTGTGTTGGAGCAGCTTTTGTGCTTTTTCTCTTTCTAATTTCTCTTTGGATTGCTTCAAAACGCTCTCGCAAGAAGATTTCTAACAGACCCACCATTCCCATCGTCTCTAAAGAAATCCAAGAGATCAGAATCGATCACCCCTTCCCTCAAAACCAAGAACATAACAAGCCCAGTAGGTCCCATTTTCAGGTTGACCCACTTCCGGAGCCGGAACCAATTCCGGGAATTGAGCGTCAAGCGTTGCTTTCGTTGCCTCAGGAGGAGGAGCGAGTGAATAGGATTCATATTGACATCGGGAAGGATCATAGGATTTCGTATCCTGAGCGCCTTGGTCGATCGTCTTCCTCGCAGGGTAGTGGAGAGGGGCGATGTGGTGGTGATCAGTTGCCTATGGTGGTGCCTGAAGTTTCGCATTTGGGTTGGGGGCATTGGTACACTCTCAGAGAGCTCGAAGCCTCGACTAACGGGTTCTCCCCAGATAATGTAATTGGCGAGGGTGGGTATGGAATTGTTTACCATGGCATTTTGGAGGATGGAACTCAGGTTGCTGTGAAGAATTTGCTAAATAATAGGGGACAAGCCGAGAAGGAGTTCAAAGTTGAAGTTGAAGCAATTGGACGAGTCAGACATAAGAGCTTAGTTAGATTGCTTGGATACTGTGCTGAAGGTGCTCATAGGATGCTTGTATATGAGTATATAAATAATGGAAACTTGGAACAATGGCTTCATGGGGATGTGGGATCTTTCAGCCCTCTTACCTGGGAGATTAGAATGAACATCATTCTTGGAACGGCTAAAGGGCTAGCTTACCTTCACGAGGGATTGGAACCAAAAGTCGTTCACCGGGATATCAAATCAAGCAATATCCTACTCGATAAGCAATGGAATTCCAAGGTTTCAGATTTTGGCCTTGCAAAGCTACTATGCTCTGACAATAGTTATATTACAACCCGAGTTATGGGAACATTTGGCTATGTTGCGCCAGAATATGCAAGTACAGGAATGCTGAATGAAAGAAGTGATGTGTATAGTTTTGGAATACTTGTTATGGAAATAATATCAGGACGGAACCCTGTCGATTATAGTCGTCCTCCAGATGAGGTGAACTTGATCGATTGGCTTAAGAGAATGGTTAGTAACCGTAATCCAGAGGGCGTATTGGATCCAAAGCTTGCTGAAAAGCCTACTACAAGAGCATTGAAGCGGGCTCTACTTGTTGCATTACGCTGTGTGGACCCAAATGCTCAGAAACGGCCAAAAATGGGACATATTATTCATATGCTAGAAGCTGAAGATGCTAATTTTAAAGGGGATCGCAAAGCTGGAAAAGACCCCGAGAATGCACATTCAAACAATGTCAATAATGGTTTGAATGAAAGGGAGGCGACAGAATTAGGTGGCAACAATGTGGACGAACTCGCTACTCGACAACGAGATACGTGA 1533 45.01 MSDHKSGSMADQLSKQTSIFGLRLWVVLGVCVGAAFVLFLFLISLWIASKRSRKKISNRPTIPIVSKEIQEIRIDHPFPQNQEHNKPSRSHFQVDPLPEPEPIPGIERQALLSLPQEEERVNRIHIDIGKDHRISYPERLGRSSSSQGSGEGRCGGDQLPMVVPEVSHLGWGHWYTLRELEASTNGFSPDNVIGEGGYGIVYHGILEDGTQVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKSLVRLLGYCAEGAHRMLVYEYINNGNLEQWLHGDVGSFSPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKQWNSKVSDFGLAKLLCSDNSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILVMEIISGRNPVDYSRPPDEVNLIDWLKRMVSNRNPEGVLDPKLAEKPTTRALKRALLVALRCVDPNAQKRPKMGHIIHMLEAEDANFKGDRKAGKDPENAHSNNVNNGLNEREATELGGNNVDELATRQRDT* 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5874875 5877493 + Chy2G031710.1 Chy02g00904 220352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00904 510 Gene3D Transferase(Phosphotransferase) domain 1 263 473 - -
Chy02g00904 510 Pfam Protein kinase domain 190 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00904 510 SUPERFAMILY Protein kinase-like (PK-like) 168 459 IPR011009 -
Chy02g00904 510 CDD STKc_IRAK 193 459 - -
Chy02g00904 510 ProSitePatterns Protein kinases ATP-binding region signature. 193 215 IPR017441 GO:0005524
Chy02g00904 510 ProSiteProfiles Protein kinase domain profile. 187 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00904 510 Gene3D Phosphorylase Kinase; domain 1 168 262 - -
Chy02g00904 510 PANTHER RECEPTOR-LIKE KINASE PLANT 1 500 - -
Chy02g00904 510 MobiDBLite consensus disorder prediction 467 510 - -
Chy02g00904 510 SMART serkin_6 187 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00904 510 MobiDBLite consensus disorder prediction 477 492 - -
Chy02g00904 510 PANTHER OS01G0323000 PROTEIN 1 500 - -
Chy02g00904 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00887 Chy-Chr1:8089751 Chy02g00904 Chy-Chr2:5874875 2.33E-179 dispersed
Chy02g00904 Chy-Chr2:5874875 Chy06g00152 Chy-Chr6:1007186 0 dispersed
Chy02g00904 Chy-Chr2:5874875 Chy03g01555 Chy-Chr3:17717842 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71053 PF00069 Pkinase 5.50E-46 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00904 - - csv:101214966 997.267