Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy02g00907 | ATGGATTGGGTTCGAGGAGAGGAGATTGGATATGGAAGTTTTGCTACCATCAATTTAGCCACGTCTTGTTCCGGTGATCGATTTCCTCCATTGCTGGCCGTTAAATCATCTGGGCTTGTTTGCTCTGCCTCCCTCAAAAACGAGAAGCAAGTTTTGGATCTTCTTGGTGATGGTTGCCCACAAATTATTAGGTGTTTCGGGGAGAGTTGTAGTGTTGAGAACGGTGAGGAACTTTACAATCTGTTCCTCGAGTATGCTTGTGGTGGAAGTTTAGCTGATAGAATACAGAGCCGCGGTGGTCGGCTGCCGGAATTTGAGGTTCGACGGTACACCAGGACTATTCTTGAAGGGCTTCGGTATATTCACGGAAAGGGATTTGTTCATTGCGATGTTAAGCCTAGGAATATTCTGGTGTTTGGTGACGGTGATGCTAAGATTGCCGATTTCGGATTGTCGAAGAAGGCGGGAAAGAACAGAATGGAAACAGGGGAAGAGACAGGGAGATTTCAATTGAGAGGTTCTCCTCTGTACATGTCGCCGGAATCGGTAAACGATAATGAGTATGAGTCGCCGTGTGACATATGGGCCGTCGGATGCGCGGTGGTGGAGATGTTGACAGGGAAGCCCGCGTGGAATTGTCGGCCGGAATCCAACGTGTTTGCTTTATTAATCAAAATTGGGATTGGAGAAGAATTGCCGGAAATTCCTAAAGATCTATCGGAAGAAGGGAAAGATTTTCTCAAAAAATGTTTGGTGAAGGATCCCGTAAAGAGATGGACGGCCGATATGCTCCTAAAACACCCATTTGTGGCAGAGTCCGGGCGGTGTGTTCCATTGGCGGGCGTGGACGAAGTATCAACGTCGCCAAGATGTCCTTTCGATTTCGAAGATTGGGCATCGATTCATTCACAAGAGAGCGATCCTAGGAATGAAGAGGAAGCAAATTGTTGGTTGAATAATTGGTCGTGTTCGTGGAAGTCGTCTTCTCCAAGGGAGAGGCTGCTTCAGCTAGTGGAGAATGGGGCAGTAGAGTGGTCGGTCAATGAGAATTGGGTCAGGGTCAGATGA | 1068 | 47.66 | MDWVRGEEIGYGSFATINLATSCSGDRFPPLLAVKSSGLVCSASLKNEKQVLDLLGDGCPQIIRCFGESCSVENGEELYNLFLEYACGGSLADRIQSRGGRLPEFEVRRYTRTILEGLRYIHGKGFVHCDVKPRNILVFGDGDAKIADFGLSKKAGKNRMETGEETGRFQLRGSPLYMSPESVNDNEYESPCDIWAVGCAVVEMLTGKPAWNCRPESNVFALLIKIGIGEELPEIPKDLSEEGKDFLKKCLVKDPVKRWTADMLLKHPFVAESGRCVPLAGVDEVSTSPRCPFDFEDWASIHSQESDPRNEEEANCWLNNWSCSWKSSSPRERLLQLVENGAVEWSVNENWVRVR* | 356 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 5896049 | 5897116 | - | Chy2G031740.1 | Chy02g00907 | 220355 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy02g00907 | 355 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 126 | 138 | IPR008271 | GO:0004672|GO:0006468 | |
Chy02g00907 | 355 | SMART | serkin_6 | 3 | 270 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy02g00907 | 355 | Pfam | Protein kinase domain | 5 | 270 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy02g00907 | 355 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 | 1 | 329 | - | - | |
Chy02g00907 | 355 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 23 | - | - | |
Chy02g00907 | 355 | PANTHER | CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED | 1 | 329 | - | - | |
Chy02g00907 | 355 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 92 | - | - | |
Chy02g00907 | 355 | Gene3D | Transferase(Phosphotransferase) domain 1 | 93 | 310 | - | - | |
Chy02g00907 | 355 | CDD | STKc_MAPKKK | 2 | 270 | - | - | |
Chy02g00907 | 355 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 299 | IPR011009 | - | |
Chy02g00907 | 355 | ProSiteProfiles | Protein kinase domain profile. | 3 | 270 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy02g00907 | 355 | ProSitePatterns | Protein kinases ATP-binding region signature. | 9 | 35 | IPR017441 | GO:0005524 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g00438 | Chy-Chr1:3150118 | Chy02g00907 | Chy-Chr2:5896049 | 3.77E-72 | dispersed | |
Chy01g01925 | Chy-Chr1:24486450 | Chy02g00907 | Chy-Chr2:5896049 | 9.96E-64 | dispersed | |
Chy01g01926 | Chy-Chr1:24489321 | Chy02g00907 | Chy-Chr2:5896049 | 4.93E-56 | dispersed | |
Chy02g00415 | Chy-Chr2:2599132 | Chy02g00907 | Chy-Chr2:5896049 | 7.86E-67 | dispersed | |
Chy02g00907 | Chy-Chr2:5896049 | Chy11g00625 | Chy-Chr11:7372794 | 8.50E-71 | dispersed | |
Chy12g00308 | Chy-Chr12:3358260 | Chy02g00907 | Chy-Chr2:5896049 | 2.49E-48 | dispersed | |
Chy01g00220 | Chy-Chr1:1524067 | Chy02g00907 | Chy-Chr2:5896049 | 1.97E-61 | transposed | |
Chy01g01529 | Chy-Chr1:21100224 | Chy02g00907 | Chy-Chr2:5896049 | 9.25E-56 | transposed | |
Chy01g01759 | Chy-Chr1:23277145 | Chy02g00907 | Chy-Chr2:5896049 | 2.19E-63 | transposed | |
Chy03g00793 | Chy-Chr3:10860200 | Chy02g00907 | Chy-Chr2:5896049 | 1.04E-64 | transposed | |
Chy04g01494 | Chy-Chr4:21595957 | Chy02g00907 | Chy-Chr2:5896049 | 1.11E-54 | transposed | |
Chy12g00054 | Chy-Chr12:487736 | Chy02g00907 | Chy-Chr2:5896049 | 2.20E-65 | transposed | |
Chy11g00219 | Chy-Chr11:2047451 | Chy02g00907 | Chy-Chr2:5896049 | 1.36E-135 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71054 | PF00069 | Pkinase | 2.90E-52 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy02g00907 | - | - | csv:105435904 | 701.434 |