Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00907 ATGGATTGGGTTCGAGGAGAGGAGATTGGATATGGAAGTTTTGCTACCATCAATTTAGCCACGTCTTGTTCCGGTGATCGATTTCCTCCATTGCTGGCCGTTAAATCATCTGGGCTTGTTTGCTCTGCCTCCCTCAAAAACGAGAAGCAAGTTTTGGATCTTCTTGGTGATGGTTGCCCACAAATTATTAGGTGTTTCGGGGAGAGTTGTAGTGTTGAGAACGGTGAGGAACTTTACAATCTGTTCCTCGAGTATGCTTGTGGTGGAAGTTTAGCTGATAGAATACAGAGCCGCGGTGGTCGGCTGCCGGAATTTGAGGTTCGACGGTACACCAGGACTATTCTTGAAGGGCTTCGGTATATTCACGGAAAGGGATTTGTTCATTGCGATGTTAAGCCTAGGAATATTCTGGTGTTTGGTGACGGTGATGCTAAGATTGCCGATTTCGGATTGTCGAAGAAGGCGGGAAAGAACAGAATGGAAACAGGGGAAGAGACAGGGAGATTTCAATTGAGAGGTTCTCCTCTGTACATGTCGCCGGAATCGGTAAACGATAATGAGTATGAGTCGCCGTGTGACATATGGGCCGTCGGATGCGCGGTGGTGGAGATGTTGACAGGGAAGCCCGCGTGGAATTGTCGGCCGGAATCCAACGTGTTTGCTTTATTAATCAAAATTGGGATTGGAGAAGAATTGCCGGAAATTCCTAAAGATCTATCGGAAGAAGGGAAAGATTTTCTCAAAAAATGTTTGGTGAAGGATCCCGTAAAGAGATGGACGGCCGATATGCTCCTAAAACACCCATTTGTGGCAGAGTCCGGGCGGTGTGTTCCATTGGCGGGCGTGGACGAAGTATCAACGTCGCCAAGATGTCCTTTCGATTTCGAAGATTGGGCATCGATTCATTCACAAGAGAGCGATCCTAGGAATGAAGAGGAAGCAAATTGTTGGTTGAATAATTGGTCGTGTTCGTGGAAGTCGTCTTCTCCAAGGGAGAGGCTGCTTCAGCTAGTGGAGAATGGGGCAGTAGAGTGGTCGGTCAATGAGAATTGGGTCAGGGTCAGATGA 1068 47.66 MDWVRGEEIGYGSFATINLATSCSGDRFPPLLAVKSSGLVCSASLKNEKQVLDLLGDGCPQIIRCFGESCSVENGEELYNLFLEYACGGSLADRIQSRGGRLPEFEVRRYTRTILEGLRYIHGKGFVHCDVKPRNILVFGDGDAKIADFGLSKKAGKNRMETGEETGRFQLRGSPLYMSPESVNDNEYESPCDIWAVGCAVVEMLTGKPAWNCRPESNVFALLIKIGIGEELPEIPKDLSEEGKDFLKKCLVKDPVKRWTADMLLKHPFVAESGRCVPLAGVDEVSTSPRCPFDFEDWASIHSQESDPRNEEEANCWLNNWSCSWKSSSPRERLLQLVENGAVEWSVNENWVRVR* 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5896049 5897116 - Chy2G031740.1 Chy02g00907 220355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00907 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Chy02g00907 355 SMART serkin_6 3 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00907 355 Pfam Protein kinase domain 5 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00907 355 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 329 - -
Chy02g00907 355 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Chy02g00907 355 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 329 - -
Chy02g00907 355 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Chy02g00907 355 Gene3D Transferase(Phosphotransferase) domain 1 93 310 - -
Chy02g00907 355 CDD STKc_MAPKKK 2 270 - -
Chy02g00907 355 SUPERFAMILY Protein kinase-like (PK-like) 3 299 IPR011009 -
Chy02g00907 355 ProSiteProfiles Protein kinase domain profile. 3 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00907 355 ProSitePatterns Protein kinases ATP-binding region signature. 9 35 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00438 Chy-Chr1:3150118 Chy02g00907 Chy-Chr2:5896049 3.77E-72 dispersed
Chy01g01925 Chy-Chr1:24486450 Chy02g00907 Chy-Chr2:5896049 9.96E-64 dispersed
Chy01g01926 Chy-Chr1:24489321 Chy02g00907 Chy-Chr2:5896049 4.93E-56 dispersed
Chy02g00415 Chy-Chr2:2599132 Chy02g00907 Chy-Chr2:5896049 7.86E-67 dispersed
Chy02g00907 Chy-Chr2:5896049 Chy11g00625 Chy-Chr11:7372794 8.50E-71 dispersed
Chy12g00308 Chy-Chr12:3358260 Chy02g00907 Chy-Chr2:5896049 2.49E-48 dispersed
Chy01g00220 Chy-Chr1:1524067 Chy02g00907 Chy-Chr2:5896049 1.97E-61 transposed
Chy01g01529 Chy-Chr1:21100224 Chy02g00907 Chy-Chr2:5896049 9.25E-56 transposed
Chy01g01759 Chy-Chr1:23277145 Chy02g00907 Chy-Chr2:5896049 2.19E-63 transposed
Chy03g00793 Chy-Chr3:10860200 Chy02g00907 Chy-Chr2:5896049 1.04E-64 transposed
Chy04g01494 Chy-Chr4:21595957 Chy02g00907 Chy-Chr2:5896049 1.11E-54 transposed
Chy12g00054 Chy-Chr12:487736 Chy02g00907 Chy-Chr2:5896049 2.20E-65 transposed
Chy11g00219 Chy-Chr11:2047451 Chy02g00907 Chy-Chr2:5896049 1.36E-135 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71054 PF00069 Pkinase 2.90E-52 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00907 - - csv:105435904 701.434