Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00925 ATGCGTTGGCTGCGTAATATCTCCTTTACCCCTTCTTCAATGGTGAGGCTTCCGGGTTCTACAACTGGCGGTGGTGATTCTCCCACCCGAAGATCTACTAGTAGAGGTTCTGCTGAAAATAATTACCGGGGAATTGTTTGGCGTTTTGGTGCCTCTAGGTATTCCCGCCATAGGAAGCTTCGTAACTTAAGTGGACGTGAACACGTCGATACTTCTTTGGCTAAATGGTCTGATACTACGCCTGAACCTGTCTCTTTCTCGCGATCACCCAGTACCTCTGATCACCCTGCTGTTCCCTTGCCACTCCCTGAGGTTTCTCCCTTATTTCAGCCTCGTGAAAGGATCTCCACTTCCAATTCTGCTGGGGGAGAGGGTGATTGCCCTCTTCCATCGCCCAAAGGTTTGCGTGGACGCGCCGGGGATGAACGTGATGTAGATAGAGATAGAACTGCACCCCCTCAGAAGATTGGGGGTGGAATCTCCCCTAACGCTTCCATTAAAAGTGTATCTGATTCTGGGGGGGAAAGACATACGAAAGGTCAGATTGAAGCAAGGTTGTCAGGTAGGGCGAATCAGGATGCAAGGAGATATCCTGAAAATTCTCGGAATGGTTTTTGGATTGATGTTCCTAGTAGGAGTGCTCCTACTAGTCCTTATACAAGTCCTACACTTAGTCCTCAAAGAAATACTTCGGGTAACATTTCAAATTTCCATTATATGTCTCCAGTAGGAAATCAAGGTTGGTCTGCACCTGAGCTGCCAAATTTCCCTTGTGTGGCTCCTCCAGTTGGAAATCACGTCTGGTCTGCACCTGAGCTGCCATCCTCGGCAATGATGCGGGGGGTTCCTCCTGCATTCTTTGATTGCTCTACTCTTAGTACTGAGAGTTCTCCCATGCATAGCCCAAGAGGTAAAAGTCCCCACCGAGATCCCAGAAGTCCAACAGGACCTACATCTCCATTGCACGCCAAGATTTCCCATGAAACACATGCTATGCGCCGTGAGGGTTCTGGTCATGTCAGTGTCCACCCTTTGCCTCTTCCTCCTGGAGTGCCAATGCCTTCAGTGTCAATCCCAACAATGGCTTCAACACCAACCTCCATCAATCTATCATCACCCCCTGTGTCTTCACCATCACATTCAATACCTTCAGCATCATGCTCGATGGCTCTACCGTCAACCCCGATGGCATCACCGTCAACCCCAATTTCACAAGCTAACACTAAGAGTGAATCAATCTCAATGAAAAATCAATGGCAGAAAGGAAAGCTTATTGGTCGGGGCACATTTGGAAGTGTGTATGTTGCTAGCAACAGACAAAATGGAGCTTTATGTGCAATGAAGGAAGTTGAACTATTTCACGATGATCCAAAGTCAGCTGAATCTATAAAGCAATTAGAACAGGAGATCAAACTTCTGAGCCAGCTAAAGCATCCAAATATTGTTCAATACTATGGTAGTGATATTATTGATGATCGATTATATATATACCTGGAGTATGTTCATCCTGGTTCAATTAATAAATATGTTCGTGAACATTGCGGAGCTATGACAGAATCTGTTGTTCGAAATTTTACTCGACACATCCTCTCAGGGTTGGCCTACTTGCACAGCACAAAGACAATACACAGGGACATTAAAGGTGCTAATTTGCTGGTGGATTCTTGTGGAGTTGTCAAGCTTGCTGACTTTGGAATGGCTAAACACCTTACAGGACAAGTTGCTGATCTTTCTTTAAAGGGAAGTCCATATTGGATGGCTCCTGAGCTCCTTCTGTCTGTGATGCAGAAAGATAACACCCCCGATCTAGCCTTAGCAGTTGATATTTGGAGCCTTGGTTGCACTATTATAGAAATGTTCACTGGCAAACCACCTTGGAGTGAGTATGAAGGGGCTGCAGCTATGTTTAAAGTCATGAAAGATACCCCACCAATGCCTGAATCATTGTCATACGAAGCGAGAGATTTCTTAAAATGTTGCTTTCAAAGAAATCCTGCAGAGAGGCCGACCGCTGCCATGCTGCTTGAACATCCGTTCATGAAAAACTTGCAGTATCCAGATGCTTCATCTTGCTCTCAGGTTGTTGCTGGAGCAAGTTTGATGGATAAATGTTATAGCCCAAGTAAACAATATTCAAGTAAATCTGATCAGTCTTCCATGCTTCCAAGCCCACAAAATTCCAAGGGAAAGTTAGCGGCCGATAGTGTGATTGGCCCACTATCTCATCATGAAACCTCTGACTTAACAGTAATGTCTCGTTATTCCCCCCGTTCTACCCTTGAAGCTCTTCCAATGGAAGAACCATACATTAATATGATAGCCCATGGATGGGAGGGAAAGAAAGTGCTTGTGCCAGGCTTGCCCTCAGCTTTGCTCGTATCTCCAATCGACGAGCGTTTAGCAGGGGTGGTAAAGTATCGGGGGAAAAGTCAGCTTCATAAGGAGAAGCCAGATTCAGATGCTGCATCTAGTGGAGCTTCAGTAATGGCGACATCCACTGATCATTCTTTGGTGTTGGCGTGGGAAAATCGCCACTTCCATTGTGTTCCATATGATACAACTTCAAACTGA 2571 45.66 MRWLRNISFTPSSMVRLPGSTTGGGDSPTRRSTSRGSAENNYRGIVWRFGASRYSRHRKLRNLSGREHVDTSLAKWSDTTPEPVSFSRSPSTSDHPAVPLPLPEVSPLFQPRERISTSNSAGGEGDCPLPSPKGLRGRAGDERDVDRDRTAPPQKIGGGISPNASIKSVSDSGGERHTKGQIEARLSGRANQDARRYPENSRNGFWIDVPSRSAPTSPYTSPTLSPQRNTSGNISNFHYMSPVGNQGWSAPELPNFPCVAPPVGNHVWSAPELPSSAMMRGVPPAFFDCSTLSTESSPMHSPRGKSPHRDPRSPTGPTSPLHAKISHETHAMRREGSGHVSVHPLPLPPGVPMPSVSIPTMASTPTSINLSSPPVSSPSHSIPSASCSMALPSTPMASPSTPISQANTKSESISMKNQWQKGKLIGRGTFGSVYVASNRQNGALCAMKEVELFHDDPKSAESIKQLEQEIKLLSQLKHPNIVQYYGSDIIDDRLYIYLEYVHPGSINKYVREHCGAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSCGVVKLADFGMAKHLTGQVADLSLKGSPYWMAPELLLSVMQKDNTPDLALAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPPMPESLSYEARDFLKCCFQRNPAERPTAAMLLEHPFMKNLQYPDASSCSQVVAGASLMDKCYSPSKQYSSKSDQSSMLPSPQNSKGKLAADSVIGPLSHHETSDLTVMSRYSPRSTLEALPMEEPYINMIAHGWEGKKVLVPGLPSALLVSPIDERLAGVVKYRGKSQLHKEKPDSDAASSGASVMATSTDHSLVLAWENRHFHCVPYDTTSN* 857
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6095744 6101323 - Chy2G031920.1 Chy02g00925 220373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00925 856 SUPERFAMILY Protein kinase-like (PK-like) 402 724 IPR011009 -
Chy02g00925 856 Pfam Protein kinase domain 420 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00925 856 ProSiteProfiles Protein kinase domain profile. 419 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00925 856 MobiDBLite consensus disorder prediction 709 730 - -
Chy02g00925 856 MobiDBLite consensus disorder prediction 290 408 - -
Chy02g00925 856 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 764 - -
Chy02g00925 856 MobiDBLite consensus disorder prediction 14 38 - -
Chy02g00925 856 MobiDBLite consensus disorder prediction 357 408 - -
Chy02g00925 856 ProSitePatterns Protein kinases ATP-binding region signature. 425 448 IPR017441 GO:0005524
Chy02g00925 856 MobiDBLite consensus disorder prediction 709 731 - -
Chy02g00925 856 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 764 - -
Chy02g00925 856 Gene3D Transferase(Phosphotransferase) domain 1 415 719 - -
Chy02g00925 856 SMART serkin_6 419 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00925 856 MobiDBLite consensus disorder prediction 74 94 - -
Chy02g00925 856 MobiDBLite consensus disorder prediction 74 232 - -
Chy02g00925 856 MobiDBLite consensus disorder prediction 213 232 - -
Chy02g00925 856 MobiDBLite consensus disorder prediction 172 196 - -
Chy02g00925 856 MobiDBLite consensus disorder prediction 136 151 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00925 Chy-Chr2:6095744 Chy09g01038 Chy-Chr9:12879506 2.17E-114 dispersed
Chy08g00283 Chy-Chr8:6544227 Chy02g00925 Chy-Chr2:6095744 3.98E-22 dispersed
Chy02g00925 Chy-Chr2:6095744 Chy03g01508 Chy-Chr3:17409966 1.55E-163 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71056 PF00069 Pkinase 3.90E-68 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00925 - - csv:101219486 1444.87