Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy02g01002 | ATGGAATCTCCCATTCATGTAAAGATTCGATTATTAATGGATGAGAGGGGGGTGAGCTTTATGAGAGGAAGAAATGCGATTGGAAATTATGGCGGTGACGATGATCACCACAATGAAAATGACGGGAAGCCTCGGTTGAGGGTGTCGACGATGAAGATGAAGCGGATAAAAGGTAGGAAGAAAGTGAGAGAGCCAAGGTTCAGCTTTAAAACGATGACGGATGTGGATGTTCTTGACGATGGTTACAAATGGAGAAAGTATGGCCAAAAAGTTGTTAAGAACACCCTCCATCCAAGAAGTTACTATCGTTGCACGGAAGAGAATTGTAAGGTAAAAAAGAGAGTCGAAAGGTTAGCGGATGATCCAAGAATGGTGATAACAACATATGAAGGAAGACATGCTCATTCGCCTTCGGATCATAATTTAGAAGATTCTTTCATGGGTCACTTACCTTCTTCCCACCTCACCAATTTCTTCTGCTAG | 483 | 42.24 | MESPIHVKIRLLMDERGVSFMRGRNAIGNYGGDDDHHNENDGKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCKVKKRVERLADDPRMVITTYEGRHAHSPSDHNLEDSFMGHLPSSHLTNFFC* | 161 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 6714319 | 6715859 | + | Chy2G032690.1 | Chy02g01002 | 220450 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy02g01002 | 160 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 41 | 143 | IPR044810 | GO:0003700 | |
Chy02g01002 | 160 | Pfam | WRKY DNA -binding domain | 79 | 135 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy02g01002 | 160 | Gene3D | WRKY domain | 65 | 131 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy02g01002 | 160 | ProSiteProfiles | WRKY domain profile. | 73 | 138 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy02g01002 | 160 | PANTHER | WRKY TRANSCRIPTION FACTOR 13-RELATED | 41 | 143 | - | - | |
Chy02g01002 | 160 | SMART | WRKY_cls | 78 | 137 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy02g01002 | 160 | SUPERFAMILY | WRKY DNA-binding domain | 70 | 137 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g01002 | Chy-Chr2:6714319 | Chy06g00013 | Chy-Chr6:100402 | 1.67E-45 | dispersed | |
Chy02g01002 | Chy-Chr2:6714319 | Chy11g01581 | Chy-Chr11:22383847 | 5.69E-34 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17515 | PF03106 | WRKY | 1.90E-25 | CL0274 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy02g01002 | - | - | csv:101208878 | 298.516 |