Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01019 ATGGACACCGCTGGTAGACTCATTGCTGGGTCTCATAATAGAAATGAGTTTGTTCTGATCAATGCAGACGAGACTGCTCGGATCAAGTCTGTGAAAGAATTGAGTGGGCAAACATGTCAGATTTGTGGAGATGCAGTAGAGTTAACTGCCGAGGGAGAGCTCTTTGTTGCCTGTAATGAATGTGCTTTTCCAGTTTGTAGACCTTGCTATGAGTACGAGAGAAGAGAGGGGAATCAAGCTTGTCCGCAGTGTAAAACCAGATACAAGCGCATTAAAGGCAGTCCTAGGGTTGAAGGTGACGAGGATGAAGATGATATTGATGATTTGGACAATGAGTTCGATTATGGAAACCTTGATGATTTCGGCCCCCACCATGCTGCTGAAGGATCATATGGATCGCACCTTAACTCTGGCCGCGGTTCCCACCCTAATGCATCTCATATCCCTGGACAGTCAGAGCATGAACCTTCTCCTCTTGGTTCTGGGATTCCCCTCCTGACATATGGTGAGGAGGATTATGAAATTTCTGCCGATCAACATGCCCTTGTACCCCATTTTATGGGTAATGGAAATCGAGCCCATCCAATGCCTTCCCCTGATCGATCAAGTCCTTCACAATGTAGACCAATGGTTCCCCACAAAGATTTTGCATTATATGGTTATGGGAGTGTGGCATGGAAGGACAGAATGGAAGATTGGAAGAAGAAGCAAAATGATAAACTTCAAGTGGTGAAACATCCAGGGGTTGATGATGGGAATGATATCGATGATCCTGATTTGCCCATGATGGATGAAGCTAGGCAGCCTCTATCAAGGAAATTGCCCATCTCTTCAAGCAGGATAAATCCGTACAGATTAATCATCTTGCTTCGTCTTGTTATTCTCGGCCTGTTTTTCCATTACAGAATTCTTCATCCAGTTGAAGATGCCTATGGCCTGTGGCTGACTTCAGTAATATGTGAAATATGGTTTGCTGTATCATGGATTCTTGATCAGTTCCCAAAATGGTATCCAATTGAAAGAGAAACTTATCTTGATCGGCTTTCACTAAGGTATGAAAAAGAAGGGAAACCTTCTGAATTAGCCAGTGTGGATGTATTTGTTAGTACTGTCGATCCAACGAAAGAACCTCCTTTGATCACTGCAAATACAGTACTTTCCATCCTTGCAGTCGACTATCCAGTTGATAAAGTTGCATGCTATGTCTCAGATGATGGTGCAGCCATGTTAACATTTGAAGCACTCTCTGAGACATCTGAATTTGCAAGGAAATGGGTTCCTTTCTGTAAAAAATTCAATATTGAGCCTCGGGCCCCAGAGTTTTATTTCTCTCAGAAGATTGATTATTTGAAGAACAAGGTCCACCCAGCATTTGTCAGGGAAAGGCGAGCAATGAAGAGAGAATATGAAGAGTTTAAGGTTAGGGTGAATGCTTTGGTCTCCATGGCTCAAAAGGTTCCTGAGGATGGATGGACAATGCAAGATGGTACTCCGTGGCCTGGGAACAATGTCCGAGACCACCCTGGCATGATTCAGGTCTTCCTTGGCCAAAATGGAGTTTGTGATGTTGAAGGAAATGAGCTACCACGTTTGGTTTATGTTTCTCGTGAAAAGCGGCCAGGGTTCGAACATCACAAAAAGGCTGGTGCCATGAATTCACTGGTTCGGGTCTCGGCAGTTCTCTCAAATGCTCCTTATCTTCTCAATGTTGACTGTGATCACTACATTAACAATAGCAAGGCACTTAGAGAAGCTATGTGTTTCATGATGGATCCTACATCTGGAAAGAAAGTTTGTTATGTGCAGTTTCCACAAAGATTTGATGGGATCGATCGACATGATAGATATTCAAACCGGAACGTAGTATTCTTTGATATTAACATGAAAGGATTAGATGGACTACAAGGACCAATATATGTTGGTACAGGATGTGTTTTCCGGAGGGTTGCCCTCTATGGATATGATGCTCCTTCCAAGAAAAAACCCCCAAGCAAAACATGCAACTGTTTGCCAAAATGGTGCTGTCTGTGTTGTGGGTCTAGGAGCAAGAAAGGAAAGGCCAATAATTCAAAAAAGAAGAAGACAAAGCACAGAGAAGCATCAAAGCAGATCCATGCACTTGAGAATATCGAGGAGGGAATCGAAGGAGATTGGGAGAAATCCAACATGGCTTGCCATATATTTACTGCAGACCTAAGTATAGAGAAATTGAATGCGTCTGAAATAAAATTGGCGAAAAAATTCGGGCAATCTCCAGTGTTTGTTGCCTCAACCTTGTTGGAAAATGGTGGAGTTCCCCATGATGTGAGTGCTGCATCTCTCCTAAGAGAAGCCATTCAAGTGATCAGTTGTGGTTATGAAGATAAAACAGAATGGGGGAAAGAGGTTGGCTGGATTTATGGTTCTGTGACTGAAGATATCTTGACTGGATTTAAAATGCACTGTCACGGCTGGCGGTCTGTGTATTGTATTCCCAAGAGACCCGCATTTAAAGGATCAGCTCCAATCAATCTCTCAGATCGTCTACACCAAGTTTTACGGTGGGCTCTAGGATCTGTTGAGATATTCTTGAGCAGACACTGTCCTATCTGGTATGGCTATGGAGGCGGGTTGAAATGTCTGGAACGATTTTCATACATAAACTCAGTGGTCTACCCGTGGACCTCAATCCCATTGCTTGTTTACTGTAGTCTGCCAGCTATCTGTCTTCTCACTGGAAAATTTATTGTTCCTGAGATTAGCAACTATGCTAGTCTTATTTTCATGGCACTCTTCATTTCAATTGCTGCAACCGGTATTCTTGAGATGCAGTGGGGTGGTGTCGGGATTGACGACTGGTGGAGAAATGAACAATTCTGGGTTATTGGAGGTGTTTCATCACATCTTTTTGCTCTCTTCCAAGGTCTACTCAAGGTTTTAGCTGGTGTTAGTACCAACTTCACAGTTACATCCAAAGCAGCTGATGATGGTGAATTCTCAGAGCTCTACATCTTCAAGTGGACATCATTGTTAATACCTCCCACAACCTTATTGATCATAAACATTGTTGGTGTGATTGTCGGGATCTCAGATGCCATCAATAATGGGTATGATTCCTGGGGTCCTCTTTTCGGAAGGCTATTTTTCGCTCTTTGGGTGATTATCCACCTCTACCCTTTCTTGAAGGGTTTGTTAGGGAAACAGGACCGGTTACCAACGATCATTGTTGTTTGGTCAATTCTTTTAGCCTCGATCTTAACATTACTCTGGGTAAGAATCAACCCATTTGTATCCAAAGACGGTCCTGTTTTAGAAGTTTGCGGGTTGAATTGCGACTAA 3318 43.07 MDTAGRLIAGSHNRNEFVLINADETARIKSVKELSGQTCQICGDAVELTAEGELFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVEGDEDEDDIDDLDNEFDYGNLDDFGPHHAAEGSYGSHLNSGRGSHPNASHIPGQSEHEPSPLGSGIPLLTYGEEDYEISADQHALVPHFMGNGNRAHPMPSPDRSSPSQCRPMVPHKDFALYGYGSVAWKDRMEDWKKKQNDKLQVVKHPGVDDGNDIDDPDLPMMDEARQPLSRKLPISSSRINPYRLIILLRLVILGLFFHYRILHPVEDAYGLWLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSELASVDVFVSTVDPTKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFNIEPRAPEFYFSQKIDYLKNKVHPAFVRERRAMKREYEEFKVRVNALVSMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVCDVEGNELPRLVYVSREKRPGFEHHKKAGAMNSLVRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKVCYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGLQGPIYVGTGCVFRRVALYGYDAPSKKKPPSKTCNCLPKWCCLCCGSRSKKGKANNSKKKKTKHREASKQIHALENIEEGIEGDWEKSNMACHIFTADLSIEKLNASEIKLAKKFGQSPVFVASTLLENGGVPHDVSAASLLREAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKCLERFSYINSVVYPWTSIPLLVYCSLPAICLLTGKFIVPEISNYASLIFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKAADDGEFSELYIFKWTSLLIPPTTLLIINIVGVIVGISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRLPTIIVVWSILLASILTLLWVRINPFVSKDGPVLEVCGLNCD* 1106
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6871617 6877154 - Chy2G032860.1 Chy02g01019 220467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01019 1105 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 1104 - -
Chy02g01019 1105 MobiDBLite consensus disorder prediction 134 151 - -
Chy02g01019 1105 MobiDBLite consensus disorder prediction 685 700 - -
Chy02g01019 1105 CDD mRING-HC-C4C4_CesA_plant 37 87 - -
Chy02g01019 1105 Pfam Cellulose synthase 364 1093 IPR005150 GO:0016020|GO:0016760|GO:0030244
Chy02g01019 1105 Pfam Zinc-binding RING-finger 29 105 IPR027934 -
Chy02g01019 1105 MobiDBLite consensus disorder prediction 93 162 - -
Chy02g01019 1105 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 9 [UDP-FORMING]-RELATED 1 1104 - -
Chy02g01019 1105 SUPERFAMILY Nucleotide-diphospho-sugar transferases 373 923 IPR029044 -
Chy02g01019 1105 MobiDBLite consensus disorder prediction 682 701 - -
Chy02g01019 1105 MobiDBLite consensus disorder prediction 100 115 - -
Chy02g01019 1105 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Chy02g01019 1105 SUPERFAMILY RING/U-box 25 111 - -
Chy02g01019 1105 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 517 656 IPR029044 -
Chy02g01019 1105 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01019 Chy-Chr2:6871617 Chy03g00248 Chy-Chr3:2363057 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01019 K10999 - csv:101211094 2173.28