Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01031 ATGAATCTGGATGATCAATTATATGACGTGAATTTATGGAATGTTTTGAAAAAAATGGCCGATGCCGAGGATATTCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAGGCTGGTTTTGCTGGTGATGATGCTCCTAGGGCTGTTTTCCCCAGTATTGTTGGTCGTCCCCGACATACTGGTGTCATGGTTGGGATGGGCCAAAAGGATGCCTATGTTGGGGATGAAGCTCAGTCCAAAAGAGGTATTCTTACCTTGAAATATCCCATTGAACATGGTATTGTCAGTAACTGGGATGACATGGAAAAGATTTGGCATCACACGTTCTACAATGAGCTTCGTGTTGCTCCTGAAGAACATCCTGTGCTTCTGACTGAGGCTCCACTCAACCCAAAGGCTAACAGAGAAAAGATGACTCAAATCATGTTTGAGACATTCAATGTGCCTGCTATGTATGTTGCCATCCAGGCCGTTCTGTCCCTCTACGCTAGTGGACGTACCACTGGTATCGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTTCCCATCTATGAGGGTTACGCCCTCCCTCATGCCATTCTTCGTTTGGACCTTGCTGGTCGTGACCTTACTGATGCTCTCATGAAGATTCTCACTGAAAGAGGTTACATGTTCACCACCACTGCCGAACGGGAAATTGTCCGTGACATGAAAGAGAAGCTGGCATATGTTGCTCTTGACTACGAACAAGAACTCGAGACTGCAAAGAGCAGTTCCTCTATTGAGAAGAACTACGAACTTCCTGATGGACAAGTCATCACCATCGGAGCTGAGAGATTCCGTTGCCCAGAAGTTCTATTCCAGCCATCTCTCATCGGTATGGAAGCTGCAGGAATACACGAAACTACTTACAACTCCATCATGAAGTGTGATGTAGACATCAGAAAGGACCTTTATGGAAACATTGTCCTCAGTGGTGGTTCAACTATGTTCCCTGGCATTGCAGACAGGATGAGCAAGGAAATCACAGCCCTTGCTCCCAGCAGCATGAAGATTAAGGTCGTTGCACCACCCGAAAGGAAATACAGTGTTTGGATTGGAGGGTCTATTCTTGCATCTCTAAGTACCTTCCAGCAGATGTGGATCTCAAAGGGTGAATATGATGAATCTGGCCCATCCATCGTCCACAGGAAGTGCTTCTAA 1188 46.46 MNLDDQLYDVNLWNVLKKMADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF* 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7030507 7032078 - Chy2G032980.1 Chy02g01031 220479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01031 395 Pfam Actin 23 395 IPR004000 -
Chy02g01031 395 PANTHER ACTIN 19 394 IPR004000 -
Chy02g01031 395 SMART actin_3 25 395 IPR004000 -
Chy02g01031 395 ProSitePatterns Actins signature 2. 376 384 IPR004001 -
Chy02g01031 395 PRINTS Actin signature 46 55 IPR004000 -
Chy02g01031 395 PRINTS Actin signature 81 103 IPR004000 -
Chy02g01031 395 PRINTS Actin signature 160 179 IPR004000 -
Chy02g01031 395 PRINTS Actin signature 135 148 IPR004000 -
Chy02g01031 395 PRINTS Actin signature 256 272 IPR004000 -
Chy02g01031 395 PRINTS Actin signature 69 80 IPR004000 -
Chy02g01031 395 Gene3D - 28 389 - -
Chy02g01031 395 ProSitePatterns Actins and actin-related proteins signature. 124 136 IPR020902 -
Chy02g01031 395 CDD NBD_sugar-kinase_HSP70_actin 28 201 - -
Chy02g01031 395 ProSitePatterns Actins signature 1. 73 83 IPR004001 -
Chy02g01031 395 SUPERFAMILY Actin-like ATPase domain 166 395 IPR043129 -
Chy02g01031 395 Gene3D Actin; Chain A, domain 4 200 291 - -
Chy02g01031 395 SUPERFAMILY Actin-like ATPase domain 24 173 IPR043129 -
Chy02g01031 395 Gene3D - 158 358 - -
Chy02g01031 395 PANTHER ACTIN 19 394 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01031 Chy-Chr2:7030507 Chy04g01779 Chy-Chr4:24120671 0 dispersed
Chy01g00298 Chy-Chr1:2110223 Chy02g01031 Chy-Chr2:7030507 0 transposed
Chy01g01857 Chy-Chr1:24004539 Chy02g01031 Chy-Chr2:7030507 5.46E-66 transposed
Chy03g00095 Chy-Chr3:950914 Chy02g01031 Chy-Chr2:7030507 2.74E-53 transposed
Chy10g00535 Chy-Chr10:11933729 Chy02g01031 Chy-Chr2:7030507 2.20E-18 transposed
Chy11g00060 Chy-Chr11:639147 Chy02g01031 Chy-Chr2:7030507 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01031 K10355 - csv:101220617 758.059