Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01126 ATGACTCCCATTTTGAGTTATGTTGTGTCTAAATGGCAAGCGTTGTCCACTTCTGACCACGCCTCTGTTGTTTCCATTAACTTGTTTGTGGCACTTCTCTGTGCTTGTATTGTCATTGGTCATCTTCTTGAGGAGACCCGGTGGATGAATGAGTCCATCACCGCACTCTTTATTGGTTTGTTTACTGGAGTCATCATTTTACTAGTTAGTGGTGGGAAAAGTTCGCATCTATTGCTCTTTAGCGAAGACACGTTCTTCATTTATCTTCTGCCTCCGATTATATTCAACGCCGGGTTTCAGGTGAAAAAGAAGCAGTTCTTTGTTAACTTTATGACCATTATGATGTTTGGCGCAATTGGTACATTAGTCTCTTGTGCAATCATCTCGTTAGGAGCTTTTCAGTTATTTAAGAAAATGGATGTTGGATCTCTAGATATGGCTGATATTTTAGCAATTGGAGCCATATTTGCCGCAACAGATTCTGTATGCACGTTGCAGATATTAAACCAGGATGAAACCCCTCTACTTTACAGTCTAGTATTTGGGGAGGGTGTAGTGAATGACGCCACATCTGTGGTGCTTTTCAATGCTATTCAGAGCTTAGATTTCAGTAAAGTTGATGCAACAGTTGGTTTACATTTTATTGGGAGCTTCTTTTATTTATTTTCAACAAGCACTTTACTCGGAGTATTTGTTGGCTTGCTGAGTGCTTATGTAATCAAAAAGTTATATTTTGGCAGGCACTCGACAGATCGTGAGGTTGCTCTTATGATACTCATGGCATATCTTTCTTATATGCTGGCTGAATTACTAGATTTGAGTGGCATTCTCACGGTGTTCTTTTGTGGAATTGTAATGTCACATTATACCTGGCATAATGTGACTGAGGGCTCAAGAGTTACCACCAAGCATGCTTTTGCCACCTTATCCTTCATTTCTGAGACGTTTATCTTCGTCTATGTCGGCATGGATGCATTGGACATTGAGAAGTGGAGCTTTGTTAGTGATAGTCCGGGGACATCAGTTGCTGTGAGCGCAATATTACTAGGCCTTGTTATGGTTGGAAGAGCTGCTTTTGTTTTTCCATTGTCATTTATATCAAACTTGGCTAAAAAATCGTCCAGCGAGAAAATTACCTTCCGGGAACAAGTTATCATTTGGTGGGCTGGTCTCATGAGAGGGGCTGTCTCTATTGCTTTAGCTTATCATCAGTTCACTAGAGCTGGGCACACTCAACTTCGAGGGAATGCAATGATGATCACCAGTACCATCACTGTTGTCCTCTTCAGCACGATGGTGTTTGGATTATTGACCAAGCCTCTTATTAACTGTTTCATACCTCAACCAAAACACACCACCAGCATGCTATCGGACCCTGGGACTCCAAAGTCATTCTCAGTTCCACTACTTGGAAGTGCACAGGAGTCAGAGCTGGATCTTCCTCGTCCAAGCAGTATACGTGCACTCCTTGCGACTCCTACACATACTGTTCACCGCTACTGGCGAAAGTTCGACGATGCCTTCATGCGTCCAATGTTTGGGGGTCGGGGTTTTGTTCCTTTTGTTCCAGGATCGCCAACCGAAAGGGGTCGACACTGA 1599 42.84 MTPILSYVVSKWQALSTSDHASVVSINLFVALLCACIVIGHLLEETRWMNESITALFIGLFTGVIILLVSGGKSSHLLLFSEDTFFIYLLPPIIFNAGFQVKKKQFFVNFMTIMMFGAIGTLVSCAIISLGAFQLFKKMDVGSLDMADILAIGAIFAATDSVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSLDFSKVDATVGLHFIGSFFYLFSTSTLLGVFVGLLSAYVIKKLYFGRHSTDREVALMILMAYLSYMLAELLDLSGILTVFFCGIVMSHYTWHNVTEGSRVTTKHAFATLSFISETFIFVYVGMDALDIEKWSFVSDSPGTSVAVSAILLGLVMVGRAAFVFPLSFISNLAKKSSSEKITFREQVIIWWAGLMRGAVSIALAYHQFTRAGHTQLRGNAMMITSTITVVLFSTMVFGLLTKPLINCFIPQPKHTTSMLSDPGTPKSFSVPLLGSAQESELDLPRPSSIRALLATPTHTVHRYWRKFDDAFMRPMFGGRGFVPFVPGSPTERGRH* 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7962646 7968144 - Chy2G033930.1 Chy02g01126 220574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01126 532 Pfam Sodium/hydrogen exchanger family 29 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Chy02g01126 532 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Chy02g01126 532 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Chy02g01126 532 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Chy02g01126 532 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Chy02g01126 532 PANTHER SODIUM/HYDROGEN EXCHANGER 2 7 532 - -
Chy02g01126 532 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 24 445 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Chy02g01126 532 Gene3D - 145 197 - -
Chy02g01126 532 PANTHER SODIUM/HYDROGEN EXCHANGER 7 532 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01074 Chy-Chr1:12076630 Chy02g01126 Chy-Chr2:7962646 3.89E-176 dispersed
Chy01g01637 Chy-Chr1:22338932 Chy02g01126 Chy-Chr2:7962646 0 dispersed
Chy02g01126 Chy-Chr2:7962646 Chy11g01468 Chy-Chr11:21423386 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01126 - - csv:101214934 1018.07