Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01127 ATGGGGTGTTTGGTTAGCCGAGAGGCGTCTTCTAGAAGTGTAGAAGCCCCTGTAGATAAGGGGAAGAGGAATCAAATTACTGAGTCTCGTGTTCAAGGCGAGATTGTTCAGGAGAAAGAAGTAGAACGTGTGAGTGCTAATGTAGAGGAGCATGTAAACGTGAACAAGGAAGAGGAACAGAAGGCTGATGTGGTTCAGGATCGCCCACGAGCTGAACGGAGAAAGTCGAGGAAGGTTCCGAGGCCAACTAACTTGCCAAACCATTCCCAGGGAGAGCAAGTTGCTGCTGGATGGCCTTCTTGGCTCACAGCTGTTTGCGGAGAGGCTCTCAATGGTTGGATTCCTCGGAAGGCTGATACATTTGAAAAGATTGATAAGATTGGACAAGGAACGTATAGCAATGTGTATAAAGCTAAAGATATACTTACAGGTAAAATTGTTGCACTGAAGAAGGTTCGATTTGACAATCTGGAACCTGAAAGTGTGAAATTTATGGCTAGAGAGATTCTCATCCTTAGGAGATTAAATCATAACAATGTTGTGAAATTAGAAGGGTTGGTTACATCACGGATGTCATGTAGTTTATACTTGGTGTTTGAGTACATGGAACATGATTTAGCAGGTCTTGCTGCGAATCCATCAATCAAATTTACGGAATCTCAGGTTAAATGTTTTATGCAACAACTGTTATCTGGATTGGAACACTGTCATAATCGCCGGGTGCTTCACCGTGACATTAAAGGATCTAATCTTCTCATTGATAGTGGAGGAGTGCTTAAGATTGCTGACTTTGGATTGGCTTCTTTCTTTGATCCAAATCACAAGCACCCTATGACTAGTCGGGTGGTTACCTTATGGTATCGACCTCCTGAACTTCTTCTTGGAGCAACTGATTATGGAGTAGGTGTAGACCTCTGGAGTGCTGGGTGTATACTGGCAGAGTTATTAGCTGGGAGGCCTATTATGCCCGGTCGTACAGAGGTAGAGCAACTACACAAGATATACAAGCTTTGTGGCTCCCCTTCAGATGAATATTGGAAAAGAGCAAAACTTCCAAATGCAACCTTATTTAAGCCCAGAGACCCTTATAAGAGATGTATAAAAGAGACATTTAAAGATTTTCCCCCATCTTCTCTGCCCCTTATAGAAACGCTTCTTGCAATTGATCCAGCAGAACGAAAGACAGCAACAGATGCATTAAATAGCGAGTTCTTCATGACAGAACCTTTAGCCTGCAAACCCTCCAACCTTCCAAAATATCCTCCCAGTAAGGAGATGGATGCTAGAAGACGGGATGACGAAGCTCGAAGATTAAGAGCAGCTAGTAAAGCCCAAGGAGATGGAGCGAAGAAAACACGCACACGTGTTAGGGCTATTCCAGCTCCCGAAGCCAATGCTGAAATACAAACAAATATTGACAGAAGGCGCTTAATTACACATGCTAATGCAAAAAGCAAAAGTGAAAAGTTCCCCCCACCACACCAAGATGGAGCGCTTGGCTTTACTCTAGGATATTCACGTCATATCGACCCAGCTGGTGTTCCTCCTGACATACCGTTCAGCTCGACGTTATTCACTTATTCTAAGGAACCAATCCAAGCTTGGTCTGGTCCACTAGTCCCGGGTGCTGGCACTGATGCTCCTCATAGACAGAAGAAGCATGTTGGAGGTAAAGGCAAGAAAATCATGGTCTAA 1695 44.01 MGCLVSREASSRSVEAPVDKGKRNQITESRVQGEIVQEKEVERVSANVEEHVNVNKEEEQKADVVQDRPRAERRKSRKVPRPTNLPNHSQGEQVAAGWPSWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDILTGKIVALKKVRFDNLEPESVKFMAREILILRRLNHNNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAANPSIKFTESQVKCFMQQLLSGLEHCHNRRVLHRDIKGSNLLIDSGGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIYKLCGSPSDEYWKRAKLPNATLFKPRDPYKRCIKETFKDFPPSSLPLIETLLAIDPAERKTATDALNSEFFMTEPLACKPSNLPKYPPSKEMDARRRDDEARRLRAASKAQGDGAKKTRTRVRAIPAPEANAEIQTNIDRRRLITHANAKSKSEKFPPPHQDGALGFTLGYSRHIDPAGVPPDIPFSSTLFTYSKEPIQAWSGPLVPGAGTDAPHRQKKHVGGKGKKIMV* 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7980635 7989085 - Chy2G033940.1 Chy02g01127 220575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01127 564 MobiDBLite consensus disorder prediction 423 454 - -
Chy02g01127 564 PANTHER OS01G0367700 PROTEIN 49 550 - -
Chy02g01127 564 Pfam Protein kinase domain 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01127 564 MobiDBLite consensus disorder prediction 545 564 - -
Chy02g01127 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Chy02g01127 564 CDD STKc_CDK9_like 121 405 - -
Chy02g01127 564 MobiDBLite consensus disorder prediction 13 73 - -
Chy02g01127 564 MobiDBLite consensus disorder prediction 1 93 - -
Chy02g01127 564 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Chy02g01127 564 MobiDBLite consensus disorder prediction 415 454 - -
Chy02g01127 564 PANTHER CELL DIVISION PROTEIN KINASE 49 550 - -
Chy02g01127 564 SUPERFAMILY Protein kinase-like (PK-like) 115 409 IPR011009 -
Chy02g01127 564 ProSiteProfiles Protein kinase domain profile. 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01127 564 Gene3D Phosphorylase Kinase; domain 1 108 203 - -
Chy02g01127 564 Gene3D Transferase(Phosphotransferase) domain 1 204 444 - -
Chy02g01127 564 SMART serkin_6 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01127 564 Coils Coil 41 68 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g01127 Chy05g01169 CCT
Chy02g01127 Chy05g01169 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01127 Chy-Chr2:7980635 Chy12g01147 Chy-Chr12:16403329 0 dispersed
Chy06g00655 Chy-Chr6:4494701 Chy02g01127 Chy-Chr2:7980635 0 transposed
Chy02g01127 Chy-Chr2:7980635 Chy05g01169 Chy-Chr5:16170734 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71064 PF00069 Pkinase 4.80E-68 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01127 K08819 - csv:101215893 1130.93