Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01148 ATGGATCCTCGCAACGACGCCGTTTTCCGCGACGAAGACCTCGAAGACGACGAGGAATCACTCGACGACGACGACGACGACGAGGAAGAGGAAGAATTGAACGACGAACCTTCTCCTTCCACATCCTCCGCCGGCCCCCTTCCTGTCACTTCCGTATCCGCTACCGTCACCATCGCCACTCCCCCCGCTGTCTCCGTTGTTCCTCCTCCTTCGATCGTCTCAATCTCCTCCGCCGATCTGATTCGCCAGCGTCTCGAAACTGCTACTGCTGAGCCTTTGACCTTACCGGGAGAGAAGAAGCCTTTGGATGAGTCCAGGAAGTTGTTTCAACGTCTTTGGACCGATGAGGATGAGATCGAGCTGTTGCAAGGGTTTTTAGATTATACGATGCAGCGTGGTACGACTCATCATCATCAGAATGATACGGCCTTGTTTTATGACCAGATCAAGTCTAAATTACAGTTGGATTTTAACAAGAATCAGCTTGTGGAGAAGCTTCGGAGGTTGAAGAAGAAATATCGTAACGTTATTGGTAAGATTAGCTCTGGTAAGGACTTTAATTTTAAAAGCCCTCACGATCAAGCCACGTTTGAGATCTCTCGCAAGATCTGGAGTAATACTGGCCGAATTGGAGTTGACGACAACGCTTTGGATGACGATGAGCCTGCTCCGACTCCTTATGCTACCTACATGGATCATAGAAACGAAGAAATGATGGCGAATTGTGCAGAGAAGAAACCGACGCCTACTCCGAAATCGCGGAAGCGTTCAAGGCCTGGATCGGGAATTAGAATGGAAGCGCCACGTTCTTCCCATGAGAATTTGAATAAAGAGAAGAATAGTATCTACCACCACCACCACAACCACAACAACAACAACAACAACGCCAACAACAACGAAAATGTCAATAACGTAGCTGTAGCTGGCTTGATCGAGGAGACGGTGAAGAGCTGCTTGTCGCCATTGTTTAAGGAATTGTTGAATACTTCCATGGGAGGTGGGCTCTGTGGAGGCAGAGGGTTTAGTGGATTAGCTTTGCATCCAATTCCATTGAGCTTCAGTGGAGCTTCCTTGAATTTCAGTGGTGGATTAGAAATGGGGGATGAGAGGTGGAGGAAGCAGCAGATTTTGGAACTGGAGGTTTATTCAAAGAGGTTGGAGTTGGTTCAGGAGCAAATTAAGACGGCATTAGAAGATTTGAGGAAAGTCTAA 1212 47.77 MDPRNDAVFRDEDLEDDEESLDDDDDDEEEEELNDEPSPSTSSAGPLPVTSVSATVTIATPPAVSVVPPPSIVSISSADLIRQRLETATAEPLTLPGEKKPLDESRKLFQRLWTDEDEIELLQGFLDYTMQRGTTHHHQNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVIGKISSGKDFNFKSPHDQATFEISRKIWSNTGRIGVDDNALDDDEPAPTPYATYMDHRNEEMMANCAEKKPTPTPKSRKRSRPGSGIRMEAPRSSHENLNKEKNSIYHHHHNHNNNNNNANNNENVNNVAVAGLIEETVKSCLSPLFKELLNTSMGGGLCGGRGFSGLALHPIPLSFSGASLNFSGGLEMGDERWRKQQILELEVYSKRLELVQEQIKTALEDLRKV* 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8192994 8194205 + Chy2G034150.1 Chy02g01148 220596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01148 403 PANTHER BNAANNG10740D PROTEIN-RELATED 2 402 IPR007592 GO:0006355
Chy02g01148 403 Coils Coil 379 399 - -
Chy02g01148 403 MobiDBLite consensus disorder prediction 11 36 - -
Chy02g01148 403 MobiDBLite consensus disorder prediction 242 274 - -
Chy02g01148 403 Pfam Protein of unknown function, DUF573 109 205 IPR007592 GO:0006355
Chy02g01148 403 PANTHER BNAANNG10740D PROTEIN 2 402 - -
Chy02g01148 403 MobiDBLite consensus disorder prediction 1 49 - -
Chy02g01148 403 Coils Coil 159 179 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00404 Chy-Chr1:2864353 Chy02g01148 Chy-Chr2:8192994 2.64E-19 dispersed
Chy02g00365 Chy-Chr2:2342305 Chy02g01148 Chy-Chr2:8192994 1.96E-27 dispersed
Chy02g01148 Chy-Chr2:8192994 Chy05g01177 Chy-Chr5:16259777 3.59E-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17526 PF04504 DUF573 1.40E-34 CL0123 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01148 - - csv:101219457 642.499