Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01195 ATGGCTTCCATTAACGTTTCTTATCTTTTCATTGCCCTTTTCCTTTTAGCCTTCTCAGCCAATGCTCAGCTCTCATCTCGTTTTTACTCGAAAAGTTGTCCGAAACTCGAATGGATTGTTCGTGCTGGTATGGTGAAAGCTATAAACAGAGAAAAGCGTATGGGAGCTTCGATGCTTCGCATGTTCTTCCACGATTGCTTTGTAAATGGTTGCGATGCTTCTGTAATGCTTGATGATACTCCAACAATGAGGGGCGAAAAAAATGCTTTCCCAAATAGGAATTCACTTAGAGGGTTCGAAGTAATTGACGATATTAAAACTCAGGTGGAAGCTGCTTGCAAAGAGACCGTTTCATGTGCTGATATTCTTGCTCTTGCCGCTCGTGATGGGGTGGTTTTGCTTGGGGGACCAAAATGGGATGTACCACTTGGTCGAAGGGACTCGAGGACAGCGAGTGAGAGCGAAGCAAACAACGATCTTCCAGCACCAAGTTCCAACCTCCATACACTAATCTCAATGTTCGCTGTTAAAGGCTTTAACGCCAACGAAATGACAGCTATGTCTGGCGCTCACACCATAGGCATGGGACAATGTCAATTCTTCCGAACTCGGATTTACAATGATACCAACATCAACAGTGCCTTTGCTGCCCAGCGATGA 660 45.0 MASINVSYLFIALFLLAFSANAQLSSRFYSKSCPKLEWIVRAGMVKAINREKRMGASMLRMFFHDCFVNGCDASVMLDDTPTMRGEKNAFPNRNSLRGFEVIDDIKTQVEAACKETVSCADILALAARDGVVLLGGPKWDVPLGRRDSRTASESEANNDLPAPSSNLHTLISMFAVKGFNANEMTAMSGAHTIGMGQCQFFRTRIYNDTNINSAFAAQR* 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8602860 8604268 - Chy2G034620.1 Chy02g01195 220643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01195 219 CDD secretory_peroxidase 23 218 IPR033905 GO:0004601|GO:0042744
Chy02g01195 219 Pfam Peroxidase 41 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy02g01195 219 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy02g01195 219 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy02g01195 219 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy02g01195 219 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy02g01195 219 ProSiteProfiles Plant heme peroxidase family profile. 23 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy02g01195 219 Gene3D - 28 160 - -
Chy02g01195 219 MobiDBLite consensus disorder prediction 144 163 - -
Chy02g01195 219 PANTHER PEROXIDASE 18 219 - -
Chy02g01195 219 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Chy02g01195 219 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy02g01195 219 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy02g01195 219 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy02g01195 219 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy02g01195 219 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy02g01195 219 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy02g01195 219 SUPERFAMILY Heme-dependent peroxidases 23 218 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy02g01195 219 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Chy02g01195 219 PANTHER PEROXIDASE 72-RELATED 18 219 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy02g01195 219 Gene3D Peroxidase, domain 2 161 218 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00330 Chy-Chr1:2365707 Chy02g01195 Chy-Chr2:8602860 9.01E-130 dispersed
Chy02g01195 Chy-Chr2:8602860 Chy11g01392 Chy-Chr11:20336341 2.41E-84 dispersed
Chy02g01195 Chy-Chr2:8602860 Chy03g00215 Chy-Chr3:2013946 5.92E-88 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01195 K00430 - csv:101206193 375.555