Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy02g01204 | ATGGAGGAAGGTCATCCAGACGTGGCTGGGAAAGTGGTGGTTGTCGCAATTAAAGCCACCTCGAAGGAAGTTTCTAAAGCTGCTCTCGTTTGGGCTTTGACGCATGTTGTTCAACCAGGAGATCATATTAAGCTCCTTGTGGTTATCCCTTCTCATCAATCAAGTAAATGGGTGCGGGGGTTTTCTCGACTTACCAGTGATTGTGCAATCGGTCATTTGAGAACTCATTCAGGAACTTTTTCCGATCGGAAGGATGACATTGTGCATTCATGTTCTCAGATGGTGCATCAGCTTCATGGTGCATATGACTCACTGAAGATAAAAGTCAGAATCAAAGTTCTTTCCGGCTTGGTTCGGGGTATGGTGGCTACCGAAGCTAAGAAAGCTCAATCAAACTGGGTGATATTGGATAAGAATTTGAAAGATGAAAGGAAAAACTGTTTGGAAGAGCTGCAATGCAATGTTGTTCTTATGAAGAAATATCATCCTAAGGTTCTTCGTTTGAATTTGATGGAATCCCCTAAAATGAACACTAGAGAAGCTTGGATATCATCACATGAATTAGAAGTTTCTCAGAAGTGCCTTAAAAGCTATTTCGATGAACCGATCATGTTTACGGCTCCTGATGTGACTCCTGACAGTACTCCTGATGTAGAGTCTCCTTTTACCGTAACTGATATTGGAACATCATCAATATCGAGCTCAGATGTGGGCAGTTCGTCCTTGTTCTCTGGGATTTGTGGAAGCTTGAGAAATGATTCCAGAACAGCTGTCGACAGAGGGAGAAATATGTCTGGATCTGAATATGATTCTGAAAGTGAAAAGCAAACTCCCTCAGTTTCATATTTCCAGCGTTGTATGGTTGATATTATGAGTTCCCGGCGTAAATTCCAGCAACATGCAATGGAAGAATCACAAAATGCTCATCATAGACCTCCGGCTCCAACACGTCAAGGTCTGGTAAAAAAAATGTCTACTCTTTCTGTAGAACCTAGCCATGATGTGGCACATCGGAGTACTGATATTAGCTCAAGCAGAAACATAAGGAGCACGGTATCATTGTCCAGAAAAGCACCTCTAGGCCCTCCTCCGCTATGTTCTATGTGCCAACACAAGGCCCCTGCATTTGGGAATCCTCCTAGATGGTTCACTTATGCTGAACTTGAAGTCGCTACAAGTGGCTTTGCACAAACAAATTTTTTGGCTGAGGGTGGATTTGGGTCTGTGCACCGAGGCATCTTATCAGATGGACAAGTTGTTGCTGTCAAGCAATATAAACTGGCTAGCACACAGGGAGATCGAGAATTTTGTTCAGAAGTTGAGGTCTTAAGTTGTGCCCAACATCGAAACGTCGTGATGCTTATTGGATTTTGTGTGGAGGGTGGAAGAAGGTTACTTGTTTATGAATATATTTGCAATGGATCTCTTGATTCCCATCTTTATGGAAGGAATCGTGAACCATTGCAATGGTCGGCACGACAGAAGATTGCAGTCGGGGCTGCTCGAGGATTGAGATACCTTCACGAAGAATGTAGAGTGGGCTGTATTGTGCACCGTGATATCCGTCCAAACAATATCCTCCTTACTCATGATTTTGAGCCACTAGTTGGAGATTTTGGGCTGGCAAGGTGGCAACCGGATGGTGACCTAGCAGTAGAAACCAGAATCCTTGGGAGATTTGGCTACCTGGCTCCTGAGTATGCACAGAGTGGCCAAATTACAGAGAAAGCCGATACATACTCATTTGGCGTTGTCTTGCTGGAACTTGTGACTGGACGCAAAGCAATTGATTTAAATCGTCCCAAGGGCCAGCAATGCCTCACTGAATGGGCACGAAACCTGTTGAGAAAAAATGCAATCTCTGAACTAGTTGATCCATGTTTGAGGAACTGTTATTCAGACGAGGAAGTTCACCGCATGCTGCAATGCGCTTCCTTGTGCATAAAGCGTGATCCGTATGTAAGACCGCGTATGTCTCAGGTAACTAAATGA | 1992 | 44.03 | MEEGHPDVAGKVVVVAIKATSKEVSKAALVWALTHVVQPGDHIKLLVVIPSHQSSKWVRGFSRLTSDCAIGHLRTHSGTFSDRKDDIVHSCSQMVHQLHGAYDSLKIKVRIKVLSGLVRGMVATEAKKAQSNWVILDKNLKDERKNCLEELQCNVVLMKKYHPKVLRLNLMESPKMNTREAWISSHELEVSQKCLKSYFDEPIMFTAPDVTPDSTPDVESPFTVTDIGTSSISSSDVGSSSLFSGICGSLRNDSRTAVDRGRNMSGSEYDSESEKQTPSVSYFQRCMVDIMSSRRKFQQHAMEESQNAHHRPPAPTRQGLVKKMSTLSVEPSHDVAHRSTDISSSRNIRSTVSLSRKAPLGPPPLCSMCQHKAPAFGNPPRWFTYAELEVATSGFAQTNFLAEGGFGSVHRGILSDGQVVAVKQYKLASTQGDREFCSEVEVLSCAQHRNVVMLIGFCVEGGRRLLVYEYICNGSLDSHLYGRNREPLQWSARQKIAVGAARGLRYLHEECRVGCIVHRDIRPNNILLTHDFEPLVGDFGLARWQPDGDLAVETRILGRFGYLAPEYAQSGQITEKADTYSFGVVLLELVTGRKAIDLNRPKGQQCLTEWARNLLRKNAISELVDPCLRNCYSDEEVHRMLQCASLCIKRDPYVRPRMSQVTK* | 664 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 8682493 | 8686164 | + | Chy2G034710.1 | Chy02g01204 | 220652 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy02g01204 | 663 | SUPERFAMILY | Protein kinase-like (PK-like) | 378 | 663 | IPR011009 | - | |
Chy02g01204 | 663 | CDD | STKc_IRAK | 401 | 661 | - | - | |
Chy02g01204 | 663 | SMART | tyrkin_6 | 395 | 663 | IPR020635 | GO:0004713|GO:0006468 | |
Chy02g01204 | 663 | PANTHER | - | 11 | 662 | - | - | |
Chy02g01204 | 663 | Gene3D | Phosphorylase Kinase; domain 1 | 366 | 470 | - | - | |
Chy02g01204 | 663 | PANTHER | OS01G0253100 PROTEIN | 11 | 662 | IPR045271 | GO:0004714|GO:0006468 | |
Chy02g01204 | 663 | MobiDBLite | consensus disorder prediction | 254 | 276 | - | - | |
Chy02g01204 | 663 | ProSiteProfiles | Protein kinase domain profile. | 395 | 663 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy02g01204 | 663 | Gene3D | Transferase(Phosphotransferase) domain 1 | 471 | 663 | - | - | |
Chy02g01204 | 663 | MobiDBLite | consensus disorder prediction | 332 | 354 | - | - | |
Chy02g01204 | 663 | Pfam | Protein tyrosine and serine/threonine kinase | 399 | 661 | IPR001245 | GO:0004672|GO:0006468 | |
Chy02g01204 | 663 | MobiDBLite | consensus disorder prediction | 297 | 316 | - | - | |
Chy02g01204 | 663 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 516 | 528 | IPR008266 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g01204 | Chy-Chr2:8682493 | Chy04g00641 | Chy-Chr4:7348350 | 0 | dispersed | |
Chy02g01204 | Chy-Chr2:8682493 | Chy04g00545 | Chy-Chr4:5499304 | 5.06E-174 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71068 | PF07714 | PK_Tyr_Ser-Thr | 1.40E-41 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy02g01204 | - | - | csv:101208373 | 1306.2 |