Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01204 ATGGAGGAAGGTCATCCAGACGTGGCTGGGAAAGTGGTGGTTGTCGCAATTAAAGCCACCTCGAAGGAAGTTTCTAAAGCTGCTCTCGTTTGGGCTTTGACGCATGTTGTTCAACCAGGAGATCATATTAAGCTCCTTGTGGTTATCCCTTCTCATCAATCAAGTAAATGGGTGCGGGGGTTTTCTCGACTTACCAGTGATTGTGCAATCGGTCATTTGAGAACTCATTCAGGAACTTTTTCCGATCGGAAGGATGACATTGTGCATTCATGTTCTCAGATGGTGCATCAGCTTCATGGTGCATATGACTCACTGAAGATAAAAGTCAGAATCAAAGTTCTTTCCGGCTTGGTTCGGGGTATGGTGGCTACCGAAGCTAAGAAAGCTCAATCAAACTGGGTGATATTGGATAAGAATTTGAAAGATGAAAGGAAAAACTGTTTGGAAGAGCTGCAATGCAATGTTGTTCTTATGAAGAAATATCATCCTAAGGTTCTTCGTTTGAATTTGATGGAATCCCCTAAAATGAACACTAGAGAAGCTTGGATATCATCACATGAATTAGAAGTTTCTCAGAAGTGCCTTAAAAGCTATTTCGATGAACCGATCATGTTTACGGCTCCTGATGTGACTCCTGACAGTACTCCTGATGTAGAGTCTCCTTTTACCGTAACTGATATTGGAACATCATCAATATCGAGCTCAGATGTGGGCAGTTCGTCCTTGTTCTCTGGGATTTGTGGAAGCTTGAGAAATGATTCCAGAACAGCTGTCGACAGAGGGAGAAATATGTCTGGATCTGAATATGATTCTGAAAGTGAAAAGCAAACTCCCTCAGTTTCATATTTCCAGCGTTGTATGGTTGATATTATGAGTTCCCGGCGTAAATTCCAGCAACATGCAATGGAAGAATCACAAAATGCTCATCATAGACCTCCGGCTCCAACACGTCAAGGTCTGGTAAAAAAAATGTCTACTCTTTCTGTAGAACCTAGCCATGATGTGGCACATCGGAGTACTGATATTAGCTCAAGCAGAAACATAAGGAGCACGGTATCATTGTCCAGAAAAGCACCTCTAGGCCCTCCTCCGCTATGTTCTATGTGCCAACACAAGGCCCCTGCATTTGGGAATCCTCCTAGATGGTTCACTTATGCTGAACTTGAAGTCGCTACAAGTGGCTTTGCACAAACAAATTTTTTGGCTGAGGGTGGATTTGGGTCTGTGCACCGAGGCATCTTATCAGATGGACAAGTTGTTGCTGTCAAGCAATATAAACTGGCTAGCACACAGGGAGATCGAGAATTTTGTTCAGAAGTTGAGGTCTTAAGTTGTGCCCAACATCGAAACGTCGTGATGCTTATTGGATTTTGTGTGGAGGGTGGAAGAAGGTTACTTGTTTATGAATATATTTGCAATGGATCTCTTGATTCCCATCTTTATGGAAGGAATCGTGAACCATTGCAATGGTCGGCACGACAGAAGATTGCAGTCGGGGCTGCTCGAGGATTGAGATACCTTCACGAAGAATGTAGAGTGGGCTGTATTGTGCACCGTGATATCCGTCCAAACAATATCCTCCTTACTCATGATTTTGAGCCACTAGTTGGAGATTTTGGGCTGGCAAGGTGGCAACCGGATGGTGACCTAGCAGTAGAAACCAGAATCCTTGGGAGATTTGGCTACCTGGCTCCTGAGTATGCACAGAGTGGCCAAATTACAGAGAAAGCCGATACATACTCATTTGGCGTTGTCTTGCTGGAACTTGTGACTGGACGCAAAGCAATTGATTTAAATCGTCCCAAGGGCCAGCAATGCCTCACTGAATGGGCACGAAACCTGTTGAGAAAAAATGCAATCTCTGAACTAGTTGATCCATGTTTGAGGAACTGTTATTCAGACGAGGAAGTTCACCGCATGCTGCAATGCGCTTCCTTGTGCATAAAGCGTGATCCGTATGTAAGACCGCGTATGTCTCAGGTAACTAAATGA 1992 44.03 MEEGHPDVAGKVVVVAIKATSKEVSKAALVWALTHVVQPGDHIKLLVVIPSHQSSKWVRGFSRLTSDCAIGHLRTHSGTFSDRKDDIVHSCSQMVHQLHGAYDSLKIKVRIKVLSGLVRGMVATEAKKAQSNWVILDKNLKDERKNCLEELQCNVVLMKKYHPKVLRLNLMESPKMNTREAWISSHELEVSQKCLKSYFDEPIMFTAPDVTPDSTPDVESPFTVTDIGTSSISSSDVGSSSLFSGICGSLRNDSRTAVDRGRNMSGSEYDSESEKQTPSVSYFQRCMVDIMSSRRKFQQHAMEESQNAHHRPPAPTRQGLVKKMSTLSVEPSHDVAHRSTDISSSRNIRSTVSLSRKAPLGPPPLCSMCQHKAPAFGNPPRWFTYAELEVATSGFAQTNFLAEGGFGSVHRGILSDGQVVAVKQYKLASTQGDREFCSEVEVLSCAQHRNVVMLIGFCVEGGRRLLVYEYICNGSLDSHLYGRNREPLQWSARQKIAVGAARGLRYLHEECRVGCIVHRDIRPNNILLTHDFEPLVGDFGLARWQPDGDLAVETRILGRFGYLAPEYAQSGQITEKADTYSFGVVLLELVTGRKAIDLNRPKGQQCLTEWARNLLRKNAISELVDPCLRNCYSDEEVHRMLQCASLCIKRDPYVRPRMSQVTK* 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8682493 8686164 + Chy2G034710.1 Chy02g01204 220652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01204 663 SUPERFAMILY Protein kinase-like (PK-like) 378 663 IPR011009 -
Chy02g01204 663 CDD STKc_IRAK 401 661 - -
Chy02g01204 663 SMART tyrkin_6 395 663 IPR020635 GO:0004713|GO:0006468
Chy02g01204 663 PANTHER - 11 662 - -
Chy02g01204 663 Gene3D Phosphorylase Kinase; domain 1 366 470 - -
Chy02g01204 663 PANTHER OS01G0253100 PROTEIN 11 662 IPR045271 GO:0004714|GO:0006468
Chy02g01204 663 MobiDBLite consensus disorder prediction 254 276 - -
Chy02g01204 663 ProSiteProfiles Protein kinase domain profile. 395 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01204 663 Gene3D Transferase(Phosphotransferase) domain 1 471 663 - -
Chy02g01204 663 MobiDBLite consensus disorder prediction 332 354 - -
Chy02g01204 663 Pfam Protein tyrosine and serine/threonine kinase 399 661 IPR001245 GO:0004672|GO:0006468
Chy02g01204 663 MobiDBLite consensus disorder prediction 297 316 - -
Chy02g01204 663 ProSitePatterns Tyrosine protein kinases specific active-site signature. 516 528 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01204 Chy-Chr2:8682493 Chy04g00641 Chy-Chr4:7348350 0 dispersed
Chy02g01204 Chy-Chr2:8682493 Chy04g00545 Chy-Chr4:5499304 5.06E-174 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71068 PF07714 PK_Tyr_Ser-Thr 1.40E-41 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01204 - - csv:101208373 1306.2