Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01246 ATGTGGAATACAAAGAAGATTGTGTACTTATATGTCAACTTCACAAATAATGATTCTCGTGAGAGAGAGGGAGAGAGCGAAAATGGAGGACCGTGTGGGGCAGTGCCGCGTGGAAGGCCATTGCCAAAGCTGGGGAAGCAAGAAAAGGATCGAATCACCATTTCCCACATGTCAGAAAATCATCAGGAGAAACTGAAAAAAGGGGGATATATGGAGAATCATCAGGAGGTTGAAGGTGAGGAAGAAGATGATGTGGGACCCACCACCGTGGAGGAAGAAGAAATTGGATTTGTGGGTTCGAGCTTGACTTTGGAGAAGGTTGCTGCAGCCAAACAGTATATTGAGAATCATTACAAGGCTCAAAGAAAGCACATTCAAGAACGCAAAGAGAGGCGCTCCGTGCTTGAAAGGATGTTGGCATCTTCAGATGTCTCAGAAGAAGAACAAATTAATCTATTGAAGGATTTGGAGCGCACAGAGACTCAATACATTCGGCTGAAAAGGCATAAAATTTGTGTTGAGGATTTCTACCTTTTGACAATTATTGGGCGAGGTGCTTTCGGGGAGGTCAGACTTTGTCGGGAGAAGAAAACAGGGAACATATATGCCATGAAGAAACTGAGAAAATCAGAAATGCTCAGCAGAGGACAGGTTGAACATGTCAGAGCTGAAAGGAATTTACTTGCAGAAGTTGCGAGTCACTGCATTGTGAAACTCTATTATTCCTTCCAAGATGCCGAATACTTGTATCTGATCATGGAGTATCTTCCAGGAGGTGACATGATGACTTTACTGATAAGGGAGGAAACTTTGACGGAAACTGTGGCCAGATTTTATGTCGCCCAAAGTGTTTTGGCTATAGAGTCAATTCATAAACATAACTACATTCACAGAGACATAAAACCTGATAACCTTCTACTGGACAAAAGGGGTCATATGAAACTCTCTGATTTTGGTCTTTGCAAGCCTCTTGACTGCACAAATCTATCTGCTATAAATGAACATGAAGTCCTTGATGATGAAAACTTGAACGACACGGTGGATGTGGATGAGAGCTTTCCAGGTAAAAAAAGCGGGAGGCGCTGGAAGAGCCCCCTTGAACAACTTCAGCATTGGCAGATTAACAGAAGGAAACTGGCATTTTCCACAGTCGGCACTCCAGATTACATAGCTCCTGAAGTATTGTTAAAAAAAGGATACGGTGTGGAATGTGACTGGTGGTCTCTTGGTGCAATAATGTATGAAATGCTTGTTGGTTATCCACCATTTTATTCTGATGATCCAGTGACAACATGCCGAAAGATTGTGCATTGGAAAAATCACTTAAAATTCCCTGATGAGATAAGATTATCACCTGAAGCAAAAGACATGATCAGTAGGCTGCTTTGCGATGTCGAGAGTAGGCTCGGTTCTGGAGGTGCAGACCAAATCAAGACACATCCTTGGTTCAAAGATACCGAGTGGGACAAACTCTATGACATGGATGCAGCGTTTAAGCCCGAGGTCAATGGGGAACTCGATACACAAAATTTTATGCAATTTGATGAGGTTGATCCACCGCCAACTAGATCTGGATCTGGGCCAATAAGGAAGATGTTGTTGACTCCCAAAGATCTCAGTTTTGTTGGTTATACATACAAAAATTTTGAAGCCGTAAAAGGACTACGCCATTCACTTGATGTGAAGTCAAACACGACCCCTATTCGAACGTCGTCTGTTGACTCAACTAAAAGTGACTCGGCATTGGATAACTACTCAACAGATGACAGGGAAGTCATATTGGCATCATCAGTGGATGCTTTGTCACAGTAA 1812 42.72 MWNTKKIVYLYVNFTNNDSREREGESENGGPCGAVPRGRPLPKLGKQEKDRITISHMSENHQEKLKKGGYMENHQEVEGEEEDDVGPTTVEEEEIGFVGSSLTLEKVAAAKQYIENHYKAQRKHIQERKERRSVLERMLASSDVSEEEQINLLKDLERTETQYIRLKRHKICVEDFYLLTIIGRGAFGEVRLCREKKTGNIYAMKKLRKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREETLTETVARFYVAQSVLAIESIHKHNYIHRDIKPDNLLLDKRGHMKLSDFGLCKPLDCTNLSAINEHEVLDDENLNDTVDVDESFPGKKSGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPDEIRLSPEAKDMISRLLCDVESRLGSGGADQIKTHPWFKDTEWDKLYDMDAAFKPEVNGELDTQNFMQFDEVDPPPTRSGSGPIRKMLLTPKDLSFVGYTYKNFEAVKGLRHSLDVKSNTTPIRTSSVDSTKSDSALDNYSTDDREVILASSVDALSQ* 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9075709 9087267 + Chy2G035130.1 Chy02g01246 220694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01246 603 PANTHER SERINE/THREONINE-PROTEIN KINASE 85 586 - -
Chy02g01246 603 ProSiteProfiles AGC-kinase C-terminal domain profile. 484 556 IPR000961 GO:0004674|GO:0005524|GO:0006468
Chy02g01246 603 MobiDBLite consensus disorder prediction 16 53 - -
Chy02g01246 603 ProSitePatterns Protein kinases ATP-binding region signature. 182 205 IPR017441 GO:0005524
Chy02g01246 603 Pfam Protein kinase domain 376 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01246 603 Pfam Protein kinase domain 179 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01246 603 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 85 586 - -
Chy02g01246 603 SMART serkin_6 176 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01246 603 Pfam Protein kinase C terminal domain 502 546 IPR017892 GO:0004674|GO:0005524|GO:0006468
Chy02g01246 603 Gene3D Transferase(Phosphotransferase) domain 1 382 501 - -
Chy02g01246 603 Gene3D Transferase(Phosphotransferase) domain 1 260 325 - -
Chy02g01246 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
Chy02g01246 603 SUPERFAMILY Protein kinase-like (PK-like) 158 532 IPR011009 -
Chy02g01246 603 CDD STKc_NDR_like 174 547 - -
Chy02g01246 603 ProSiteProfiles Protein kinase domain profile. 176 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01246 603 SMART pkinase_C_6 484 548 IPR000961 GO:0004674|GO:0005524|GO:0006468
Chy02g01246 603 Gene3D Phosphorylase Kinase; domain 1 174 259 - -
Chy02g01246 603 Gene3D Phosphorylase Kinase; domain 1 502 512 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01246 Chy-Chr2:9075709 Chy03g01545 Chy-Chr3:17622656 0 dispersed
Chy01g01478 Chy-Chr1:20526090 Chy02g01246 Chy-Chr2:9075709 0 transposed
Chy05g00316 Chy-Chr5:3138712 Chy02g01246 Chy-Chr2:9075709 0 transposed
Chy02g01246 Chy-Chr2:9075709 Chy07g00261 Chy-Chr7:2059432 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71070 PF00069 Pkinase 1.70E-42 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01246 K08790 - csv:101208238 1038.1