Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy02g01246 | ATGTGGAATACAAAGAAGATTGTGTACTTATATGTCAACTTCACAAATAATGATTCTCGTGAGAGAGAGGGAGAGAGCGAAAATGGAGGACCGTGTGGGGCAGTGCCGCGTGGAAGGCCATTGCCAAAGCTGGGGAAGCAAGAAAAGGATCGAATCACCATTTCCCACATGTCAGAAAATCATCAGGAGAAACTGAAAAAAGGGGGATATATGGAGAATCATCAGGAGGTTGAAGGTGAGGAAGAAGATGATGTGGGACCCACCACCGTGGAGGAAGAAGAAATTGGATTTGTGGGTTCGAGCTTGACTTTGGAGAAGGTTGCTGCAGCCAAACAGTATATTGAGAATCATTACAAGGCTCAAAGAAAGCACATTCAAGAACGCAAAGAGAGGCGCTCCGTGCTTGAAAGGATGTTGGCATCTTCAGATGTCTCAGAAGAAGAACAAATTAATCTATTGAAGGATTTGGAGCGCACAGAGACTCAATACATTCGGCTGAAAAGGCATAAAATTTGTGTTGAGGATTTCTACCTTTTGACAATTATTGGGCGAGGTGCTTTCGGGGAGGTCAGACTTTGTCGGGAGAAGAAAACAGGGAACATATATGCCATGAAGAAACTGAGAAAATCAGAAATGCTCAGCAGAGGACAGGTTGAACATGTCAGAGCTGAAAGGAATTTACTTGCAGAAGTTGCGAGTCACTGCATTGTGAAACTCTATTATTCCTTCCAAGATGCCGAATACTTGTATCTGATCATGGAGTATCTTCCAGGAGGTGACATGATGACTTTACTGATAAGGGAGGAAACTTTGACGGAAACTGTGGCCAGATTTTATGTCGCCCAAAGTGTTTTGGCTATAGAGTCAATTCATAAACATAACTACATTCACAGAGACATAAAACCTGATAACCTTCTACTGGACAAAAGGGGTCATATGAAACTCTCTGATTTTGGTCTTTGCAAGCCTCTTGACTGCACAAATCTATCTGCTATAAATGAACATGAAGTCCTTGATGATGAAAACTTGAACGACACGGTGGATGTGGATGAGAGCTTTCCAGGTAAAAAAAGCGGGAGGCGCTGGAAGAGCCCCCTTGAACAACTTCAGCATTGGCAGATTAACAGAAGGAAACTGGCATTTTCCACAGTCGGCACTCCAGATTACATAGCTCCTGAAGTATTGTTAAAAAAAGGATACGGTGTGGAATGTGACTGGTGGTCTCTTGGTGCAATAATGTATGAAATGCTTGTTGGTTATCCACCATTTTATTCTGATGATCCAGTGACAACATGCCGAAAGATTGTGCATTGGAAAAATCACTTAAAATTCCCTGATGAGATAAGATTATCACCTGAAGCAAAAGACATGATCAGTAGGCTGCTTTGCGATGTCGAGAGTAGGCTCGGTTCTGGAGGTGCAGACCAAATCAAGACACATCCTTGGTTCAAAGATACCGAGTGGGACAAACTCTATGACATGGATGCAGCGTTTAAGCCCGAGGTCAATGGGGAACTCGATACACAAAATTTTATGCAATTTGATGAGGTTGATCCACCGCCAACTAGATCTGGATCTGGGCCAATAAGGAAGATGTTGTTGACTCCCAAAGATCTCAGTTTTGTTGGTTATACATACAAAAATTTTGAAGCCGTAAAAGGACTACGCCATTCACTTGATGTGAAGTCAAACACGACCCCTATTCGAACGTCGTCTGTTGACTCAACTAAAAGTGACTCGGCATTGGATAACTACTCAACAGATGACAGGGAAGTCATATTGGCATCATCAGTGGATGCTTTGTCACAGTAA | 1812 | 42.72 | MWNTKKIVYLYVNFTNNDSREREGESENGGPCGAVPRGRPLPKLGKQEKDRITISHMSENHQEKLKKGGYMENHQEVEGEEEDDVGPTTVEEEEIGFVGSSLTLEKVAAAKQYIENHYKAQRKHIQERKERRSVLERMLASSDVSEEEQINLLKDLERTETQYIRLKRHKICVEDFYLLTIIGRGAFGEVRLCREKKTGNIYAMKKLRKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREETLTETVARFYVAQSVLAIESIHKHNYIHRDIKPDNLLLDKRGHMKLSDFGLCKPLDCTNLSAINEHEVLDDENLNDTVDVDESFPGKKSGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPDEIRLSPEAKDMISRLLCDVESRLGSGGADQIKTHPWFKDTEWDKLYDMDAAFKPEVNGELDTQNFMQFDEVDPPPTRSGSGPIRKMLLTPKDLSFVGYTYKNFEAVKGLRHSLDVKSNTTPIRTSSVDSTKSDSALDNYSTDDREVILASSVDALSQ* | 604 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 9075709 | 9087267 | + | Chy2G035130.1 | Chy02g01246 | 220694 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy02g01246 | 603 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 85 | 586 | - | - | |
Chy02g01246 | 603 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 484 | 556 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Chy02g01246 | 603 | MobiDBLite | consensus disorder prediction | 16 | 53 | - | - | |
Chy02g01246 | 603 | ProSitePatterns | Protein kinases ATP-binding region signature. | 182 | 205 | IPR017441 | GO:0005524 | |
Chy02g01246 | 603 | Pfam | Protein kinase domain | 376 | 483 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy02g01246 | 603 | Pfam | Protein kinase domain | 179 | 325 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy02g01246 | 603 | PANTHER | AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN | 85 | 586 | - | - | |
Chy02g01246 | 603 | SMART | serkin_6 | 176 | 483 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy02g01246 | 603 | Pfam | Protein kinase C terminal domain | 502 | 546 | IPR017892 | GO:0004674|GO:0005524|GO:0006468 | |
Chy02g01246 | 603 | Gene3D | Transferase(Phosphotransferase) domain 1 | 382 | 501 | - | - | |
Chy02g01246 | 603 | Gene3D | Transferase(Phosphotransferase) domain 1 | 260 | 325 | - | - | |
Chy02g01246 | 603 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 295 | 307 | IPR008271 | GO:0004672|GO:0006468 | |
Chy02g01246 | 603 | SUPERFAMILY | Protein kinase-like (PK-like) | 158 | 532 | IPR011009 | - | |
Chy02g01246 | 603 | CDD | STKc_NDR_like | 174 | 547 | - | - | |
Chy02g01246 | 603 | ProSiteProfiles | Protein kinase domain profile. | 176 | 483 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy02g01246 | 603 | SMART | pkinase_C_6 | 484 | 548 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Chy02g01246 | 603 | Gene3D | Phosphorylase Kinase; domain 1 | 174 | 259 | - | - | |
Chy02g01246 | 603 | Gene3D | Phosphorylase Kinase; domain 1 | 502 | 512 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g01246 | Chy-Chr2:9075709 | Chy03g01545 | Chy-Chr3:17622656 | 0 | dispersed | |
Chy01g01478 | Chy-Chr1:20526090 | Chy02g01246 | Chy-Chr2:9075709 | 0 | transposed | |
Chy05g00316 | Chy-Chr5:3138712 | Chy02g01246 | Chy-Chr2:9075709 | 0 | transposed | |
Chy02g01246 | Chy-Chr2:9075709 | Chy07g00261 | Chy-Chr7:2059432 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71070 | PF00069 | Pkinase | 1.70E-42 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy02g01246 | K08790 | - | csv:101208238 | 1038.1 |