Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01249 ATGAGGAAAGGAGGCTTCAGCAACAACCTCAATCTCAAGCTCAATCTTCCTAAAGAAGACCAATCCATAGCGACGTTCCTAACGCAGAGTGGCACGTTTAAAGATGGTGATCTGCTTGTAAACAGAGATGGGGTTCGGATTGTTTCTCAAAGCGAAGTTGAAGCACCACCTCCGATTAAGCCTACAGATGATCAGTTAAGTTTAGCGGACATAGACATTATTAAAGTCATAGGAAAAGGAAATGGTGGTACTGTGCAATTAGTTCAGCACAAATGGACTGCTCAGTTTTTTGCATTGAAGGTAATTCAGATGAAAATTGAAGAGTCTCACCGCAAGCAGATTGCACAAGAACTGAAAATCAATCAATCAGCGCAGTGCCCTTATGTTGTTGTCTGTTACCAGTCTTTCTATGATAATGGATCAATATATATCATCCTAGAGTACATGGATGGAGGATCTTTAGCAGATTTTTTAAAAAAGGTTAAAAAAATTGAAGAACCATATCTTGCTGCCCTTTGTAAGCAGGTACTGAAGGGGTTGTCTTACCTTCACCATGAAAGACACATCATCCATAGGGACTTAAAGCCTTCAAATTTATTAATAAACCATAGAGGGGAAGTCAAGATTACTGACTTTGGTGTGAGTGCAATTATGGAAAACACATATGCAGAGGCTAATACTTTTGTTGGCACGTATAACTATATGTCCCCAGAGAGAATTGTGGGAGAGGGATATGACAATAAAAGTGACATTTGGAGCTTGGGTCTGATTTTACTTGAGTGTGCAACCGGAAAGTTTCCTTATTCTCCACCCGGGCAAGATGGAGGATGGGTTAATTTTTATGAGCTTATGGAAGCCATTGTTGAAGGCGAACCTCCTTCTGCTCCGGCTGACCAATTTACTCCTGAATTCTGTTCATTTATTTCTGCATGGAACATCCTTTCATCAAGATGTATGAAGATAGGGATATTGATCTATCATCTTACTTCAATGATGCAGGATCTCCACTTGCAACTTTCTAAAATTTTATCTGTTGATCGTCTCTGGCTCGTACACTGGAATCTTATTTGTTTGCTGCTTGCTGCAAGGATGGACGAGGAGTCCGCTGGGATCTCGGTTTCTCATGAATACTGCTTGTTTTACTTCAGTTTGTGTCTTAATGAAAGAGGTTTCAATCAAAACTGGATGATATAG 1194 40.03 MRKGGFSNNLNLKLNLPKEDQSIATFLTQSGTFKDGDLLVNRDGVRIVSQSEVEAPPPIKPTDDQLSLADIDIIKVIGKGNGGTVQLVQHKWTAQFFALKVIQMKIEESHRKQIAQELKINQSAQCPYVVVCYQSFYDNGSIYIILEYMDGGSLADFLKKVKKIEEPYLAALCKQVLKGLSYLHHERHIIHRDLKPSNLLINHRGEVKITDFGVSAIMENTYAEANTFVGTYNYMSPERIVGEGYDNKSDIWSLGLILLECATGKFPYSPPGQDGGWVNFYELMEAIVEGEPPSAPADQFTPEFCSFISAWNILSSRCMKIGILIYHLTSMMQDLHLQLSKILSVDRLWLVHWNLICLLLAARMDEESAGISVSHEYCLFYFSLCLNERGFNQNWMI* 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9102360 9106236 - Chy2G035160.1 Chy02g01249 220697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01249 397 CDD PKc_MAPKK_plant_like 69 310 - -
Chy02g01249 397 ProSiteProfiles Protein kinase domain profile. 71 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01249 397 SUPERFAMILY Protein kinase-like (PK-like) 56 310 IPR011009 -
Chy02g01249 397 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Chy02g01249 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Chy02g01249 397 PANTHER MAP KINASE KINASE 9 343 - -
Chy02g01249 397 Gene3D Transferase(Phosphotransferase) domain 1 151 316 - -
Chy02g01249 397 SMART serkin_6 71 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01249 397 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 9 343 - -
Chy02g01249 397 Gene3D Phosphorylase Kinase; domain 1 47 150 - -
Chy02g01249 397 Pfam Protein kinase domain 73 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g01249 Chy05g01452 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01249 Chy-Chr2:9102360 Chy05g01408 Chy-Chr5:18086590 5.87E-143 dispersed
Chy02g01249 Chy-Chr2:9102360 Chy05g01452 Chy-Chr5:18365650 4.19E-165 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71071 PF00069 Pkinase 6.80E-63 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01249 K20603 - csv:101204545 619.002