Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy02g01252 | ATGCCAAACTCTTTGAATAACCTCTTGTGTCTCATTTCAAGTGGACCAGTTAACATCATTGTAGGTTCGCATGTCTGGATCGAAGATCCAAAACTAGCTTGGATTGACGGTGAAGTTTTCCGCATCAATGGCGAGGAAGTTCATGTTCGGACTACCAATGGGAAAACAGCTGTTGCCAATATATCAAAGATATTCCCCAAGGATACCGAAGCACCTGCTGCAGGTGTCGATGACATGACAAAGCTGTCATACTTGCATGAGCCTGGAGTTCTGAGCAACTTGGCGACCAGATATGAACTCAACGAAATATATACATACACTGGAAATATACTTATTGCAATAAATCCATTCCAAAGGCTACCTCATCTTTATGATACTCACATGATGGAGCAATACAAAGGAGCTGGATTCGGAGAACTGAGTCCTCATGTCTTTGCAGTTGCTGAAGTGGCATACAGAGCAATGATTAATGAAGGAAAAAGCAATTCAATTCTAGTTAGTGGAGAAAGTGGTGCTGGTAAGACCGAGACCACGAAGATGCTCATGCGGTATCTTGCATACCTTGGAGGTCGGTCTGGAGTGGAAGGGCGAACTGTTGAACAACAAGTCCTAGAATCCAATCCTGTCCTTGAAGCATTTGGCAATGCAAAAACTGTTAGGAACAACAATTCAAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGATAAGAGTGGGAGAATATCTGGGGCAGCTGTCCGAACTTATTTGCTTGAAAGATCTCGAGTATGTCAGATCTCGGATCCTGAGAGAAATTATCATTGCTTTTACCTTCTCTGTGCAGCACCTCCTGAGGAAAGGGAGAAGTATAAGTTAGCAGACCCTAAATCGTTCCACTACTTAAATCAATCTAAATGCTTTGAGTTGGATGGAGTGAATGATGCCCATGAATATCTTGCAACCAGAAGGGCTATGGATGTAGTTGGAATCAGCGAAGAGGAGCAGGAAGCAATTTTTAGGGTTGTAGCTGCAATTTTACATCTTGGAAATATTGAATTTGCAAAGGGAGAGGAGATAGATTCTTCAGTCATTAAGGATGTAAAATCCAGATTCCATCTTAATACCACTGCCGAACTGCTTAAGTGTGATGCAAAGAGTTTGGAAGATGCACTGATTCAACGTGTTATGGTAACGCCAGAAGAGGTTATAACTCGAACTCTTGATCCTGTGGCTGCTTTGGGTAGTAGGGATGCCTTGGCTAAAACGATTTATTCACGACTCTTTGATTGGCTTGTGGAGAAGATCAACAATTCCATTGGGCAAGACCCAAATTCTAAATCATTGATTGGAGTTTTGGATATTTATGGATTTGAGAGTTTTAAATTCAACAGTTTTGAACAGTTCTGCATCAATTTCACAAATGAAAAACTGCAGCAACATTTCAATCAGCATGTTTTTAAAATGGAGCAGGAGGAATATACCAAAGAGCAAATCAATTGGAGTTATATTGAGTTTGTTGACAACCAGGACGTGTTGGATCTGATTGAAAAGAAACCGGGAGGAATTATCGCACTTCTGGATGAGGCCTGCATGTTTCCTAAATCTACACACGAAACATTTGCTCAGAAGTTATACCAGACTTTCAAGAACAACAAGCGCTTCATTAAGCCTAAGCTATCGCGTACTAGTTTTACAATATCTCATTATGCTGGGGAGGTGACTTATTTGGCAGATCTATTTTTGGACAAAAACAAAGACTACGTGGTAGCAGAACATCAGGCCCTCTTAACAGCTTCAAAATGCTCCTTTGCGAGAGCTTTATTTCCTCCTCAACCAGATGAAACATCAAAATCCTCAAAATTTTCTTCCATTGGTTCACGTTTTAAATTACAACTTCAATCCTTAATGGAGACCTTAAATTCAACAGAACCTCACTACATCAGATGTGTAAAGCCAAATAATGTGCTCAAGCCTGCTATTTTTGAGAATTCAAACGTTATCCAGCAATTACGTTGTGGTGGTGTTCTCGAAGCAATTAGGATCAGCTGTGCTGGATATCCTACCAGAAGAACATTTTATGAGTTCCTCCTACGTTTTGGGGTTCTTGCACCAGAAGTTCTGGATGGAAACTATGATGACAAGGTAGCCTGCCAGATGATCCTGGATAAAATGGGTCTGAAAGGTTATCAGATTGGTAAGACAAAAATATTCCTGAGGGCTGGGCAGATGGCCTCTCTGGATGCAAAGAGAACAGAGGTGCTTAGCAATGCTGCCAGAACTATTCAAATGCAAATTAGAACGTTTATTGCACGCAAGGAGTTTGTTGCCTTACGTAAAGCTGCTATACATGTGCAATCATTTTCTCGAGGTGTTTTGGCTCGAAAACTATTTGAGCAGTTGCGACGGGAAGCAGCAGTTTTAAAGATCCAGAAGTGTTTCAAGAGATATATTGCCAGGAAATCATACTTAGATTTGCTCTCATCTGCAATCAAATTGCAAACAGGGTTAAGGGCAATGAAGGCTCGTGATGAATTCAGATTCAGAAAGCGTACCAAGGCAGCAATTATCATTCAGGCACGTTTGCGTTGTCACATGGCGCATTCTTACTATACGAGACTCCAAAAGGCTGCATTATACACACAGTGTGGTTGGAGGCGACGAGTTGCACGAAAGGAGCTAAGAAAACTGAAAATGGCTGCAAGGGAAACTGGTGCACTCAAAGAAGCAAAAGACAAATTAGAAAAACGTGTAGAAGAACTCACATGGCGCTTACAACTTGAGAAGCGGCTGAGGACTGATCTGGAAGAGGAGAAAGCCCAAGAAATTGCCAAATTACAAGATACTTTACACAACATGCAATTACAAGTTGAAGAAGCCAATGCTCAAGTTATCAAAGAGCGAGAGGCTGCTCAGAAAGCTATTGAAGAAGCACCTCCAGTTGTCAAGGAAACTCCAGTTTTTGTCGAGGATACTGAAAAAATCAATTCCTTAATGGCTGAGGTGGAGAGTCTGAAGGCTTCGCTGCTGTCAGAGAAAACGTCAGCTGAAGTAGCTAGAAAAGCTTGTACTGATGCTGAAGCCAAAAATGTGGAGCTGACTAAAAGACTTCAAGACGCAGACCATAAGGTGGATCAGCTTCAGGAGTCGGTCCAGAGACTTGAAGAGAAGCTTTCAAATTCAGAATCGGAGAACCAGGTACTTCGTCAACAAGCCTTGACGATGTCGCCAACAGGAAAAGCTTTATCTGCAAGACCCAAGTCAATGATTATTCAGAGGACACCAGAGAACGGAAATATTCCACATGGAGAGGCCAAAGTATCATTGGATACAACTCTTGCATTATCAACTGTTCGTGAGCCTGAATCAGAGGAAAAACCACAGAAATCACTTAATGAGAAACAGCAGGAGAACCAGGACCTGCTAGTGAAGTGCATATCTCAAGATTTGGGATTTTCTGGAGGCAAACCAGTTGCTGCTTGCGTCATCTATAAATGTCTTCTTCACTGGAGGTCGTTTGAAGTTGAAAGAACTGGCATATTTGATCGAATCATTCAAACAATAGCTTCATCCATAGAGGTCCCGGACAACAATGATGTATTAACTTATTGGTTATCTAATACATCCACTTTATTGTTGCTGCTTCAACACACTCTCAAAGCTAGTGGAGCTGCTAGCTTGACTCCTCAAAGGAGGAGAACTACTTCAGCTTCTCTTTTTGGAAGGATGTCTCAAGGATTAAGGGCATCTCCACAAAGTGGTGGACTGTCGTTTCTTAATGGTCGGGGGCTTGGTAGATTGGACGATTTTCGGCAGGTTGAGGCAAAGTATCCAGCACTGTTGTTTAAGCAGCAGCTTACAGCATTTTTGGAGAAAATATATGGAATGATAAGAGACAACTTGAAGAAAGAGATCTCGCCCTTACTGGGACTATGTATTCAGGCTCCTCGGACATCCCGGGCAAGCTTAGTGAAAGGACGCTCCCAAGCAAATGCCATGGCTCAGCAAGCCTTGATTGCACATTGGCAAAGCATTGTGAAAAGCTTAAACAATTATTTGAAGATCATGAAAGCAAACTATGTTCCTCCATTCTTGGTCCGCAAAATTTTCACTCAGATATTCTCATTTATTAATGTTCAACTATTTAACAGCCTTCTTTTGCGACGTGAGTGTTGTTCATTCAGCAATGGCGAGTATGTGAAAGCTGGCTTGTCTGAATTGGAACAGTGGTGTTCTGGAGCAACCGAGGAATATGCAGGGTCTGCCTGGGATGAGTTAAAGCACATTAGGCAGGCTGTTGGATTCCTTGTTATTCATCAAAAGCCCAAAAAGACATTGAATGAGATAACAAAAGACCTATGTCCTGTGCTTAGCATACAACAGTTATATAGGATCAGTACAATGTACTGGGATGACAAATATGGCACGCATAGTGTATCTTCAGAAGTTATTTCGAGTATGCGAATTTTGATGACTGAAGACTCCAACAATGCTATCAGCTCATTCCTGTTAGATGATGACTCTAGTATACCATTTTCTGTGGACGATATCTCCAAATCCATGAAACAAGTAGATGTAACAGATATAGATCCTCCACCGCTGATACGAGAAAACTCTGGGTTTGGGTTTTTGCTTCAACGTGCAGAGTAG | 4626 | 41.61 | MPNSLNNLLCLISSGPVNIIVGSHVWIEDPKLAWIDGEVFRINGEEVHVRTTNGKTAVANISKIFPKDTEAPAAGVDDMTKLSYLHEPGVLSNLATRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAGFGELSPHVFAVAEVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAVRTYLLERSRVCQISDPERNYHCFYLLCAAPPEEREKYKLADPKSFHYLNQSKCFELDGVNDAHEYLATRRAMDVVGISEEEQEAIFRVVAAILHLGNIEFAKGEEIDSSVIKDVKSRFHLNTTAELLKCDAKSLEDALIQRVMVTPEEVITRTLDPVAALGSRDALAKTIYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQALLTASKCSFARALFPPQPDETSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENSNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFLLRFGVLAPEVLDGNYDDKVACQMILDKMGLKGYQIGKTKIFLRAGQMASLDAKRTEVLSNAARTIQMQIRTFIARKEFVALRKAAIHVQSFSRGVLARKLFEQLRREAAVLKIQKCFKRYIARKSYLDLLSSAIKLQTGLRAMKARDEFRFRKRTKAAIIIQARLRCHMAHSYYTRLQKAALYTQCGWRRRVARKELRKLKMAARETGALKEAKDKLEKRVEELTWRLQLEKRLRTDLEEEKAQEIAKLQDTLHNMQLQVEEANAQVIKEREAAQKAIEEAPPVVKETPVFVEDTEKINSLMAEVESLKASLLSEKTSAEVARKACTDAEAKNVELTKRLQDADHKVDQLQESVQRLEEKLSNSESENQVLRQQALTMSPTGKALSARPKSMIIQRTPENGNIPHGEAKVSLDTTLALSTVREPESEEKPQKSLNEKQQENQDLLVKCISQDLGFSGGKPVAACVIYKCLLHWRSFEVERTGIFDRIIQTIASSIEVPDNNDVLTYWLSNTSTLLLLLQHTLKASGAASLTPQRRRTTSASLFGRMSQGLRASPQSGGLSFLNGRGLGRLDDFRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAMAQQALIAHWQSIVKSLNNYLKIMKANYVPPFLVRKIFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLSELEQWCSGATEEYAGSAWDELKHIRQAVGFLVIHQKPKKTLNEITKDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRILMTEDSNNAISSFLLDDDSSIPFSVDDISKSMKQVDVTDIDPPPLIRENSGFGFLLQRAE* | 1542 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 9133332 | 9146365 | + | Chy2G035190.1 | Chy02g01252 | 220700 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy02g01252 | 1541 | ProSiteProfiles | Dilute domain profile. | 1174 | 1485 | IPR002710 | - | |
Chy02g01252 | 1541 | ProSiteProfiles | IQ motif profile. | 770 | 798 | IPR000048 | GO:0005515 | |
Chy02g01252 | 1541 | SMART | MYSc_2a | 68 | 745 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Chy02g01252 | 1541 | Coils | Coil | 1008 | 1063 | - | - | |
Chy02g01252 | 1541 | SMART | iq_5 | 794 | 816 | IPR000048 | GO:0005515 | |
Chy02g01252 | 1541 | SMART | iq_5 | 746 | 768 | IPR000048 | GO:0005515 | |
Chy02g01252 | 1541 | SMART | iq_5 | 769 | 791 | IPR000048 | GO:0005515 | |
Chy02g01252 | 1541 | SMART | iq_5 | 817 | 839 | IPR000048 | GO:0005515 | |
Chy02g01252 | 1541 | SMART | iq_5 | 865 | 887 | IPR000048 | GO:0005515 | |
Chy02g01252 | 1541 | SMART | iq_5 | 842 | 864 | IPR000048 | GO:0005515 | |
Chy02g01252 | 1541 | ProSiteProfiles | IQ motif profile. | 795 | 824 | IPR000048 | GO:0005515 | |
Chy02g01252 | 1541 | Gene3D | - | 745 | 797 | - | - | |
Chy02g01252 | 1541 | Gene3D | - | 845 | 894 | - | - | |
Chy02g01252 | 1541 | Gene3D | - | 798 | 844 | - | - | |
Chy02g01252 | 1541 | CDD | MyosinXI_CBD | 1125 | 1507 | IPR037975 | GO:0007015 | |
Chy02g01252 | 1541 | Gene3D | Kinesin motor domain | 77 | 674 | IPR036961 | - | |
Chy02g01252 | 1541 | Gene3D | - | 679 | 742 | - | - | |
Chy02g01252 | 1541 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 45 | 799 | IPR027417 | - | |
Chy02g01252 | 1541 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 798 | 895 | IPR027417 | - | |
Chy02g01252 | 1541 | ProSiteProfiles | Myosin motor domain profile. | 74 | 744 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Chy02g01252 | 1541 | Gene3D | - | 264 | 322 | - | - | |
Chy02g01252 | 1541 | Pfam | Myosin N-terminal SH3-like domain | 21 | 60 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Chy02g01252 | 1541 | SMART | DIL_2 | 1360 | 1467 | IPR002710 | - | |
Chy02g01252 | 1541 | PRINTS | Myosin heavy chain signature | 161 | 186 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Chy02g01252 | 1541 | PRINTS | Myosin heavy chain signature | 208 | 235 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Chy02g01252 | 1541 | PRINTS | Myosin heavy chain signature | 441 | 469 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Chy02g01252 | 1541 | PRINTS | Myosin heavy chain signature | 104 | 123 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Chy02g01252 | 1541 | PRINTS | Myosin heavy chain signature | 494 | 522 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Chy02g01252 | 1541 | ProSiteProfiles | IQ motif profile. | 866 | 895 | IPR000048 | GO:0005515 | |
Chy02g01252 | 1541 | CDD | MYSc_Myo11 | 88 | 732 | IPR036018 | - | |
Chy02g01252 | 1541 | ProSiteProfiles | IQ motif profile. | 747 | 773 | IPR000048 | GO:0005515 | |
Chy02g01252 | 1541 | PANTHER | MYOSIN-5 | 18 | 1537 | - | - | |
Chy02g01252 | 1541 | Coils | Coil | 889 | 969 | - | - | |
Chy02g01252 | 1541 | ProSiteProfiles | IQ motif profile. | 843 | 869 | IPR000048 | GO:0005515 | |
Chy02g01252 | 1541 | Gene3D | - | 451 | 635 | - | - | |
Chy02g01252 | 1541 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 20 | 69 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Chy02g01252 | 1541 | Pfam | DIL domain | 1361 | 1464 | IPR002710 | - | |
Chy02g01252 | 1541 | PANTHER | MYOSIN | 18 | 1537 | - | - | |
Chy02g01252 | 1541 | Pfam | Myosin head (motor domain) | 76 | 732 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Chy02g01252 | 1541 | Pfam | IQ calmodulin-binding motif | 844 | 863 | IPR000048 | GO:0005515 | |
Chy02g01252 | 1541 | Pfam | IQ calmodulin-binding motif | 771 | 790 | IPR000048 | GO:0005515 | |
Chy02g01252 | 1541 | Pfam | IQ calmodulin-binding motif | 749 | 767 | IPR000048 | GO:0005515 | |
Chy02g01252 | 1541 | Pfam | IQ calmodulin-binding motif | 797 | 815 | IPR000048 | GO:0005515 | |
Chy02g01252 | 1541 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 324 | 613 | - | - | |
Chy02g01252 | 1541 | ProSiteProfiles | IQ motif profile. | 818 | 847 | IPR000048 | GO:0005515 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g01917 | Chy-Chr1:24405123 | Chy02g01252 | Chy-Chr2:9133332 | 0 | dispersed | |
Chy02g01252 | Chy-Chr2:9133332 | Chy05g01222 | Chy-Chr5:16631061 | 0 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy02g01252 | K10357 | - | csv:101204300 | 2940.21 |