Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01252 ATGCCAAACTCTTTGAATAACCTCTTGTGTCTCATTTCAAGTGGACCAGTTAACATCATTGTAGGTTCGCATGTCTGGATCGAAGATCCAAAACTAGCTTGGATTGACGGTGAAGTTTTCCGCATCAATGGCGAGGAAGTTCATGTTCGGACTACCAATGGGAAAACAGCTGTTGCCAATATATCAAAGATATTCCCCAAGGATACCGAAGCACCTGCTGCAGGTGTCGATGACATGACAAAGCTGTCATACTTGCATGAGCCTGGAGTTCTGAGCAACTTGGCGACCAGATATGAACTCAACGAAATATATACATACACTGGAAATATACTTATTGCAATAAATCCATTCCAAAGGCTACCTCATCTTTATGATACTCACATGATGGAGCAATACAAAGGAGCTGGATTCGGAGAACTGAGTCCTCATGTCTTTGCAGTTGCTGAAGTGGCATACAGAGCAATGATTAATGAAGGAAAAAGCAATTCAATTCTAGTTAGTGGAGAAAGTGGTGCTGGTAAGACCGAGACCACGAAGATGCTCATGCGGTATCTTGCATACCTTGGAGGTCGGTCTGGAGTGGAAGGGCGAACTGTTGAACAACAAGTCCTAGAATCCAATCCTGTCCTTGAAGCATTTGGCAATGCAAAAACTGTTAGGAACAACAATTCAAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGATAAGAGTGGGAGAATATCTGGGGCAGCTGTCCGAACTTATTTGCTTGAAAGATCTCGAGTATGTCAGATCTCGGATCCTGAGAGAAATTATCATTGCTTTTACCTTCTCTGTGCAGCACCTCCTGAGGAAAGGGAGAAGTATAAGTTAGCAGACCCTAAATCGTTCCACTACTTAAATCAATCTAAATGCTTTGAGTTGGATGGAGTGAATGATGCCCATGAATATCTTGCAACCAGAAGGGCTATGGATGTAGTTGGAATCAGCGAAGAGGAGCAGGAAGCAATTTTTAGGGTTGTAGCTGCAATTTTACATCTTGGAAATATTGAATTTGCAAAGGGAGAGGAGATAGATTCTTCAGTCATTAAGGATGTAAAATCCAGATTCCATCTTAATACCACTGCCGAACTGCTTAAGTGTGATGCAAAGAGTTTGGAAGATGCACTGATTCAACGTGTTATGGTAACGCCAGAAGAGGTTATAACTCGAACTCTTGATCCTGTGGCTGCTTTGGGTAGTAGGGATGCCTTGGCTAAAACGATTTATTCACGACTCTTTGATTGGCTTGTGGAGAAGATCAACAATTCCATTGGGCAAGACCCAAATTCTAAATCATTGATTGGAGTTTTGGATATTTATGGATTTGAGAGTTTTAAATTCAACAGTTTTGAACAGTTCTGCATCAATTTCACAAATGAAAAACTGCAGCAACATTTCAATCAGCATGTTTTTAAAATGGAGCAGGAGGAATATACCAAAGAGCAAATCAATTGGAGTTATATTGAGTTTGTTGACAACCAGGACGTGTTGGATCTGATTGAAAAGAAACCGGGAGGAATTATCGCACTTCTGGATGAGGCCTGCATGTTTCCTAAATCTACACACGAAACATTTGCTCAGAAGTTATACCAGACTTTCAAGAACAACAAGCGCTTCATTAAGCCTAAGCTATCGCGTACTAGTTTTACAATATCTCATTATGCTGGGGAGGTGACTTATTTGGCAGATCTATTTTTGGACAAAAACAAAGACTACGTGGTAGCAGAACATCAGGCCCTCTTAACAGCTTCAAAATGCTCCTTTGCGAGAGCTTTATTTCCTCCTCAACCAGATGAAACATCAAAATCCTCAAAATTTTCTTCCATTGGTTCACGTTTTAAATTACAACTTCAATCCTTAATGGAGACCTTAAATTCAACAGAACCTCACTACATCAGATGTGTAAAGCCAAATAATGTGCTCAAGCCTGCTATTTTTGAGAATTCAAACGTTATCCAGCAATTACGTTGTGGTGGTGTTCTCGAAGCAATTAGGATCAGCTGTGCTGGATATCCTACCAGAAGAACATTTTATGAGTTCCTCCTACGTTTTGGGGTTCTTGCACCAGAAGTTCTGGATGGAAACTATGATGACAAGGTAGCCTGCCAGATGATCCTGGATAAAATGGGTCTGAAAGGTTATCAGATTGGTAAGACAAAAATATTCCTGAGGGCTGGGCAGATGGCCTCTCTGGATGCAAAGAGAACAGAGGTGCTTAGCAATGCTGCCAGAACTATTCAAATGCAAATTAGAACGTTTATTGCACGCAAGGAGTTTGTTGCCTTACGTAAAGCTGCTATACATGTGCAATCATTTTCTCGAGGTGTTTTGGCTCGAAAACTATTTGAGCAGTTGCGACGGGAAGCAGCAGTTTTAAAGATCCAGAAGTGTTTCAAGAGATATATTGCCAGGAAATCATACTTAGATTTGCTCTCATCTGCAATCAAATTGCAAACAGGGTTAAGGGCAATGAAGGCTCGTGATGAATTCAGATTCAGAAAGCGTACCAAGGCAGCAATTATCATTCAGGCACGTTTGCGTTGTCACATGGCGCATTCTTACTATACGAGACTCCAAAAGGCTGCATTATACACACAGTGTGGTTGGAGGCGACGAGTTGCACGAAAGGAGCTAAGAAAACTGAAAATGGCTGCAAGGGAAACTGGTGCACTCAAAGAAGCAAAAGACAAATTAGAAAAACGTGTAGAAGAACTCACATGGCGCTTACAACTTGAGAAGCGGCTGAGGACTGATCTGGAAGAGGAGAAAGCCCAAGAAATTGCCAAATTACAAGATACTTTACACAACATGCAATTACAAGTTGAAGAAGCCAATGCTCAAGTTATCAAAGAGCGAGAGGCTGCTCAGAAAGCTATTGAAGAAGCACCTCCAGTTGTCAAGGAAACTCCAGTTTTTGTCGAGGATACTGAAAAAATCAATTCCTTAATGGCTGAGGTGGAGAGTCTGAAGGCTTCGCTGCTGTCAGAGAAAACGTCAGCTGAAGTAGCTAGAAAAGCTTGTACTGATGCTGAAGCCAAAAATGTGGAGCTGACTAAAAGACTTCAAGACGCAGACCATAAGGTGGATCAGCTTCAGGAGTCGGTCCAGAGACTTGAAGAGAAGCTTTCAAATTCAGAATCGGAGAACCAGGTACTTCGTCAACAAGCCTTGACGATGTCGCCAACAGGAAAAGCTTTATCTGCAAGACCCAAGTCAATGATTATTCAGAGGACACCAGAGAACGGAAATATTCCACATGGAGAGGCCAAAGTATCATTGGATACAACTCTTGCATTATCAACTGTTCGTGAGCCTGAATCAGAGGAAAAACCACAGAAATCACTTAATGAGAAACAGCAGGAGAACCAGGACCTGCTAGTGAAGTGCATATCTCAAGATTTGGGATTTTCTGGAGGCAAACCAGTTGCTGCTTGCGTCATCTATAAATGTCTTCTTCACTGGAGGTCGTTTGAAGTTGAAAGAACTGGCATATTTGATCGAATCATTCAAACAATAGCTTCATCCATAGAGGTCCCGGACAACAATGATGTATTAACTTATTGGTTATCTAATACATCCACTTTATTGTTGCTGCTTCAACACACTCTCAAAGCTAGTGGAGCTGCTAGCTTGACTCCTCAAAGGAGGAGAACTACTTCAGCTTCTCTTTTTGGAAGGATGTCTCAAGGATTAAGGGCATCTCCACAAAGTGGTGGACTGTCGTTTCTTAATGGTCGGGGGCTTGGTAGATTGGACGATTTTCGGCAGGTTGAGGCAAAGTATCCAGCACTGTTGTTTAAGCAGCAGCTTACAGCATTTTTGGAGAAAATATATGGAATGATAAGAGACAACTTGAAGAAAGAGATCTCGCCCTTACTGGGACTATGTATTCAGGCTCCTCGGACATCCCGGGCAAGCTTAGTGAAAGGACGCTCCCAAGCAAATGCCATGGCTCAGCAAGCCTTGATTGCACATTGGCAAAGCATTGTGAAAAGCTTAAACAATTATTTGAAGATCATGAAAGCAAACTATGTTCCTCCATTCTTGGTCCGCAAAATTTTCACTCAGATATTCTCATTTATTAATGTTCAACTATTTAACAGCCTTCTTTTGCGACGTGAGTGTTGTTCATTCAGCAATGGCGAGTATGTGAAAGCTGGCTTGTCTGAATTGGAACAGTGGTGTTCTGGAGCAACCGAGGAATATGCAGGGTCTGCCTGGGATGAGTTAAAGCACATTAGGCAGGCTGTTGGATTCCTTGTTATTCATCAAAAGCCCAAAAAGACATTGAATGAGATAACAAAAGACCTATGTCCTGTGCTTAGCATACAACAGTTATATAGGATCAGTACAATGTACTGGGATGACAAATATGGCACGCATAGTGTATCTTCAGAAGTTATTTCGAGTATGCGAATTTTGATGACTGAAGACTCCAACAATGCTATCAGCTCATTCCTGTTAGATGATGACTCTAGTATACCATTTTCTGTGGACGATATCTCCAAATCCATGAAACAAGTAGATGTAACAGATATAGATCCTCCACCGCTGATACGAGAAAACTCTGGGTTTGGGTTTTTGCTTCAACGTGCAGAGTAG 4626 41.61 MPNSLNNLLCLISSGPVNIIVGSHVWIEDPKLAWIDGEVFRINGEEVHVRTTNGKTAVANISKIFPKDTEAPAAGVDDMTKLSYLHEPGVLSNLATRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAGFGELSPHVFAVAEVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAVRTYLLERSRVCQISDPERNYHCFYLLCAAPPEEREKYKLADPKSFHYLNQSKCFELDGVNDAHEYLATRRAMDVVGISEEEQEAIFRVVAAILHLGNIEFAKGEEIDSSVIKDVKSRFHLNTTAELLKCDAKSLEDALIQRVMVTPEEVITRTLDPVAALGSRDALAKTIYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQALLTASKCSFARALFPPQPDETSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENSNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFLLRFGVLAPEVLDGNYDDKVACQMILDKMGLKGYQIGKTKIFLRAGQMASLDAKRTEVLSNAARTIQMQIRTFIARKEFVALRKAAIHVQSFSRGVLARKLFEQLRREAAVLKIQKCFKRYIARKSYLDLLSSAIKLQTGLRAMKARDEFRFRKRTKAAIIIQARLRCHMAHSYYTRLQKAALYTQCGWRRRVARKELRKLKMAARETGALKEAKDKLEKRVEELTWRLQLEKRLRTDLEEEKAQEIAKLQDTLHNMQLQVEEANAQVIKEREAAQKAIEEAPPVVKETPVFVEDTEKINSLMAEVESLKASLLSEKTSAEVARKACTDAEAKNVELTKRLQDADHKVDQLQESVQRLEEKLSNSESENQVLRQQALTMSPTGKALSARPKSMIIQRTPENGNIPHGEAKVSLDTTLALSTVREPESEEKPQKSLNEKQQENQDLLVKCISQDLGFSGGKPVAACVIYKCLLHWRSFEVERTGIFDRIIQTIASSIEVPDNNDVLTYWLSNTSTLLLLLQHTLKASGAASLTPQRRRTTSASLFGRMSQGLRASPQSGGLSFLNGRGLGRLDDFRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAMAQQALIAHWQSIVKSLNNYLKIMKANYVPPFLVRKIFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLSELEQWCSGATEEYAGSAWDELKHIRQAVGFLVIHQKPKKTLNEITKDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRILMTEDSNNAISSFLLDDDSSIPFSVDDISKSMKQVDVTDIDPPPLIRENSGFGFLLQRAE* 1542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9133332 9146365 + Chy2G035190.1 Chy02g01252 220700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01252 1541 ProSiteProfiles Dilute domain profile. 1174 1485 IPR002710 -
Chy02g01252 1541 ProSiteProfiles IQ motif profile. 770 798 IPR000048 GO:0005515
Chy02g01252 1541 SMART MYSc_2a 68 745 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy02g01252 1541 Coils Coil 1008 1063 - -
Chy02g01252 1541 SMART iq_5 794 816 IPR000048 GO:0005515
Chy02g01252 1541 SMART iq_5 746 768 IPR000048 GO:0005515
Chy02g01252 1541 SMART iq_5 769 791 IPR000048 GO:0005515
Chy02g01252 1541 SMART iq_5 817 839 IPR000048 GO:0005515
Chy02g01252 1541 SMART iq_5 865 887 IPR000048 GO:0005515
Chy02g01252 1541 SMART iq_5 842 864 IPR000048 GO:0005515
Chy02g01252 1541 ProSiteProfiles IQ motif profile. 795 824 IPR000048 GO:0005515
Chy02g01252 1541 Gene3D - 745 797 - -
Chy02g01252 1541 Gene3D - 845 894 - -
Chy02g01252 1541 Gene3D - 798 844 - -
Chy02g01252 1541 CDD MyosinXI_CBD 1125 1507 IPR037975 GO:0007015
Chy02g01252 1541 Gene3D Kinesin motor domain 77 674 IPR036961 -
Chy02g01252 1541 Gene3D - 679 742 - -
Chy02g01252 1541 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 799 IPR027417 -
Chy02g01252 1541 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 798 895 IPR027417 -
Chy02g01252 1541 ProSiteProfiles Myosin motor domain profile. 74 744 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy02g01252 1541 Gene3D - 264 322 - -
Chy02g01252 1541 Pfam Myosin N-terminal SH3-like domain 21 60 IPR004009 GO:0003774|GO:0005524|GO:0016459
Chy02g01252 1541 SMART DIL_2 1360 1467 IPR002710 -
Chy02g01252 1541 PRINTS Myosin heavy chain signature 161 186 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy02g01252 1541 PRINTS Myosin heavy chain signature 208 235 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy02g01252 1541 PRINTS Myosin heavy chain signature 441 469 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy02g01252 1541 PRINTS Myosin heavy chain signature 104 123 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy02g01252 1541 PRINTS Myosin heavy chain signature 494 522 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy02g01252 1541 ProSiteProfiles IQ motif profile. 866 895 IPR000048 GO:0005515
Chy02g01252 1541 CDD MYSc_Myo11 88 732 IPR036018 -
Chy02g01252 1541 ProSiteProfiles IQ motif profile. 747 773 IPR000048 GO:0005515
Chy02g01252 1541 PANTHER MYOSIN-5 18 1537 - -
Chy02g01252 1541 Coils Coil 889 969 - -
Chy02g01252 1541 ProSiteProfiles IQ motif profile. 843 869 IPR000048 GO:0005515
Chy02g01252 1541 Gene3D - 451 635 - -
Chy02g01252 1541 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 20 69 IPR004009 GO:0003774|GO:0005524|GO:0016459
Chy02g01252 1541 Pfam DIL domain 1361 1464 IPR002710 -
Chy02g01252 1541 PANTHER MYOSIN 18 1537 - -
Chy02g01252 1541 Pfam Myosin head (motor domain) 76 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy02g01252 1541 Pfam IQ calmodulin-binding motif 844 863 IPR000048 GO:0005515
Chy02g01252 1541 Pfam IQ calmodulin-binding motif 771 790 IPR000048 GO:0005515
Chy02g01252 1541 Pfam IQ calmodulin-binding motif 749 767 IPR000048 GO:0005515
Chy02g01252 1541 Pfam IQ calmodulin-binding motif 797 815 IPR000048 GO:0005515
Chy02g01252 1541 Gene3D Myosin VI head, motor domain, U50 subdomain 324 613 - -
Chy02g01252 1541 ProSiteProfiles IQ motif profile. 818 847 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01917 Chy-Chr1:24405123 Chy02g01252 Chy-Chr2:9133332 0 dispersed
Chy02g01252 Chy-Chr2:9133332 Chy05g01222 Chy-Chr5:16631061 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01252 K10357 - csv:101204300 2940.21