Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01254 ATGGCCAACTCTCAATTTCTCTGCTCTTCAGCTCGCTCCAAAACCGGTTTTGTTCCTCTATCAAAATCGGTTTCCTCCAATTCGACCTCCGACCATTGGGTCAAAGCTGCCAACGCTCTCAGCCACACCCATTTTGAGGAGGTTTGTCGCATGTTATCAGAGTTTCAAGAGGCACAAACTGTTGACGTTGAAGGCACCACGCTAACTGTCGCTCAGGTAGCTGCCATTGCTCGTCGAAGTGATGTCAAAGTCATCTTGAATGAATCTGTGGCACATGATCGTGTGGCCGAAAGTGCAAAATGGGTTGCTGAGAAAGTGTCGAGTGGAATCGATATATATGGAGTTACCACGGGCTTTGGTGCCACCTCCCATCTCCGTACGACCAAAATATCCGACCTCCAAACAGAGCTTATTAGATTCCTCAATGCTGGTGTCATTGGAAAGGATAATCTTCCGTCTTGCTACTCGAAGGTGGCGATGCTTGTTAGAACGAACACATTGATGCAAGGCTACTCAGGGATTCGTTGGGAAATTCTGGAAGCTCTAGTGAAGTTGATGAATGAGAATTTGATCCCTAAGTTGCCTTTGAGAGGGACGATTACTGCTTCTGGAGATCTTGTTCCTCTGTCTTATATTGCTGGCGTTGTCACTGGAAGGCATAATTCCAAGGTTACAACCATTGAAGGTGATGAGATTACTGCCATTGAAGCTCTCAAACGAGCTGGAGTTGCAGGCCCATTTGAGCTTCAAGCAAAGGAAGGATTAGCTTTAGTCAATGGAACTGCTGTTGGGTCAGCTGTTGCTGCTACAGTTTGCTACGACGCCAACATTTTGGCTCTTTTAGCCAGTGTTCTCTCTGCTTTGTTCTGTGAAGCCATGCTTGGGAAGCCAGAATTTACAGACCCGTTAACCCATAAGCTTAAGCACCACCCTGGTCAAATTGAATCCGCTGCAGTCATGGAGTTCCTCTTGAACCAAAGCGATTTCATGAAAGAAGCAAAAATCTGCAATGAAAATGATCCATTGACAAAGCCAAAACAAGATCGTTATGCACTTCGAACCTCTCCACAATGGCTCGGACCCCAAATCGAAGTCATTCGAATGGCAACTCATTCGATCGAAAGGGAAATTAACTCTGTGAATGATAACCCATTAATTGATGTTAGTCGAGATGTAGCTGTACATGGAGGAAACTTTCAGGGGACCCCAATTGGAGTCTCCATGGATAATCTTCGAATAGCCATCGCTGCAATTGGAAAGCTAATGTTTGCCCAATTCTCTGAACTCGTGTGTCATCATTACAACAATGGATTACCATCTAATTTGAGCGGCGGACCAAATCCTAGCTTGGACTACGGCTTCAAAGGGGCGGAAATCGCCATGGCTGCTTATTGCTCTGAGCTCCAATACTTAGCAAATCCTGTCACTACCCATGTCCAAAGTGCAGAACAACACAATCAAGATGTAAACTCTCTAGGTCTAATATCGGCCAGAAAATCCGCTGAAGCCATTGAAATACTAAAGCTCATGTCTGCTACATACATGGTAGCGCTTTGCCAAGCAATCGATTTAAGACAATTCGAAGAAAATATGAGGGAGGTAGTGAAAAATGCTCTTCTACAAACCATCAGAAAAACACTCTACATGGCAGAGTATGGATCTCTTCTCGAATCACGATTTTGCGAGAAGGATCTCTTGCAAGTAATCGAGCGCGAGGAAGTCTTCTCCTACATCGACGATCCCACCAACACATCCTACACCCTAATCCCAAAATTACTAGAAGTTTTAGTTGAAAAAGCATTGAAAGGAGTTGCAACAGGCAAAACAGATAACGGAAACGAAACAGGGATTGCCATATTCAAGCAAATTCCAGAGTTTCTCGAGGAATTAAAGGCGAAATTGGAAAAAGACGTTGAAAATGCAAGAGGGAGATTCGAGAATGGTGATTTCGAAATTGAAAATAGAATCAAGAAATGCAGCACTTACCCAATCTACCGATTCGTGAGAAATGAAGTGGGGACTCAACTGTTGAGTGGAGCAAAGAAGGTTAGCCCTGGAGAAGATATTGAGAAAGTGGTGGAAGCCATTGATGAAGGGAAGCTTGGAAATATTTTGATGGAGTGTTTGAAGAATTAG 2136 44.05 MANSQFLCSSARSKTGFVPLSKSVSSNSTSDHWVKAANALSHTHFEEVCRMLSEFQEAQTVDVEGTTLTVAQVAAIARRSDVKVILNESVAHDRVAESAKWVAEKVSSGIDIYGVTTGFGATSHLRTTKISDLQTELIRFLNAGVIGKDNLPSCYSKVAMLVRTNTLMQGYSGIRWEILEALVKLMNENLIPKLPLRGTITASGDLVPLSYIAGVVTGRHNSKVTTIEGDEITAIEALKRAGVAGPFELQAKEGLALVNGTAVGSAVAATVCYDANILALLASVLSALFCEAMLGKPEFTDPLTHKLKHHPGQIESAAVMEFLLNQSDFMKEAKICNENDPLTKPKQDRYALRTSPQWLGPQIEVIRMATHSIEREINSVNDNPLIDVSRDVAVHGGNFQGTPIGVSMDNLRIAIAAIGKLMFAQFSELVCHHYNNGLPSNLSGGPNPSLDYGFKGAEIAMAAYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISARKSAEAIEILKLMSATYMVALCQAIDLRQFEENMREVVKNALLQTIRKTLYMAEYGSLLESRFCEKDLLQVIEREEVFSYIDDPTNTSYTLIPKLLEVLVEKALKGVATGKTDNGNETGIAIFKQIPEFLEELKAKLEKDVENARGRFENGDFEIENRIKKCSTYPIYRFVRNEVGTQLLSGAKKVSPGEDIEKVVEAIDEGKLGNILMECLKN* 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9163776 9165911 - Chy2G035210.1 Chy02g01254 220702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01254 711 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 31 710 IPR005922 GO:0005737|GO:0006559|GO:0016841
Chy02g01254 711 PANTHER PHENYLALANINE AMMONIA-LYASE 35 710 - -
Chy02g01254 711 PANTHER HISTIDINE AMMONIA-LYASE 35 710 IPR001106 -
Chy02g01254 711 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 198 214 IPR022313 GO:0016841
Chy02g01254 711 Gene3D Fumarase/aspartase (Central domain) 262 710 - -
Chy02g01254 711 Pfam Aromatic amino acid lyase 68 544 IPR001106 -
Chy02g01254 711 Gene3D - 21 261 IPR024083 -
Chy02g01254 711 CDD PAL-HAL 66 525 IPR001106 -
Chy02g01254 711 Gene3D - 528 654 IPR023144 -
Chy02g01254 711 SUPERFAMILY L-aspartase-like 32 710 IPR008948 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01254 Chy-Chr2:9163776 Chy08g00845 Chy-Chr8:15959396 0 dispersed
Chy02g01254 Chy-Chr2:9163776 Chy03g00945 Chy-Chr3:13011403 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01254 K10775 - csv:101205510 1352.81