Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01258 ATGGCGGATAAGAAAGGAATGGAACAGCTTGTTTTACGGATTTTGGAAGGTGATGAAGGAGTTCGTGGAAGTAGTAAAGATCTTAATAAACCCTCTGTTGGTTCTTTTCCTGATTTTGATCTAAAAGAAACTCGGAGTTTTAGGTGCACGATTCCACAATCCGTGGTTGGGAGTTCTCCTTCACACGAGATTTCCAGAATGACTCCTCATAAACCTCCAAAAATTCCAGGCGAAACGGTGACACGGCGTGCATCATTTGCTTGTTCGTCGTTTACGAAGCCAAAGTCGAGGCTAATAGAGCCTCCTTGTCCTGATGGTGCAAGTTTAGCAGAAGAAAAGGCGTTAGCAAAATCTACATTGTACAGCTCTTCTAAGGTGGACTCTCCAGCTAAGATAACCACTGTGACTAGTCCTAAAGAAGCTTTGAAGGCAACCCCGATAACTCCGAAAACACCATTGATTGGAACTACTGGGAATGAGGAGGAAGATGATGAAGAAGTTTACAAAACTGCAGAACTGAAAGTGAAAGAAAAATCTGGGAAGAGATTGAAGAAAACAGTTATAGTGGAATGGGTTGCATTTTTGTGTTTAACAGGGTGTTTGATTGCTAGCTTAACTATAGAGACGTTGGTGACCAAAGAGATTTGGGGATTAGGACTGTGGAAATGGTGTGTTCTTGTATTAGTTATTTTCTGTGGTCGTTTGTTTTCGCAATGGTTTATCAATTGTCTGGTTTTCTTGATTGAAAGAAACTTTCTACTCAAAAGAAAGGTTCTTTATTTTGTCTATGGGCTGAGGAAGAGTGTTATAATTTTTATTTGGCTGGCTTTAGTTCTTCTTGCCTGGGGTCTATTATTTGATCAAAGCAGCAAGAGATCTAAGGAAGGCAACAAGATTCTGAATTATGTTACACGAGCTCTTGGTGCTTCTCTAATTGGAGCAGGACTATGGCTGGTTAAAACTTTGTTGGTGAAGATACTCGCTGCTTCTTTTCAATGCACTAGATTCTTTGATCGGATTCAAGAATCGATCTTCCATCAATATATACTACGCATTTTATCAGGACCTCCGCTCATGGAAATGGCTGAGAGGGTCGGGAGAGCGGCAAGCACAGGACAGTTGAGTTTCAAGCATTTGAAGAAAGAAAGTGATGATGGGAATGAAGGGAAGGAAGAGGTTATTGATGTAGATAAACTCAAAAAGATGAAGCAAGAAAAAATCTCTGCTTGGACCATGAGAGGGCTAATCAATGTTATAAGGGGTTCAGGATTGTCCACCATCTCTAATACAATAGAGAATTTTAAAGAGGAAGAGGTTGAGCAAAAGGATAAGGAGATTAACAGTGAATGGGAAGCAAGGGCTGCAGCTTACCAGATTTTCCGAAACGTTGCAAAACCGGGTAGCAAGTATATTGATGAAGAGGACCTCTTTCGTTTTATGAGTAAAGAGGAAATTGATAATGTGCTGCCGTTGTTTGAAGGAGGAGCTGAAACTGGGAAGATAAAGAGAAAAACCCTGAAGAATTGGCTGGTGAATGTTTACGTCGAACGCAAGTCGTTAGCTCACTCATTGAATGATACCAAGACTGCCATAGAGGAGCTAAACAAGCTTTCATCTGCAGTTATACTAATTGTGATCATCATTGAATGGCTACTTCTGATGGGTTTCTTAACTACGCAAGTACTCGTCTTCATTTCATCACAGATTCTATTGGTGGTTTTCATGTTCGGCAACACTGCCAGAACTGTATTTGAAGCCATCATATTCGTATTCGTGATGCATCCATTCGATGTTGGGGATCGTTGTGTCGTAGATGGTGTCCAGATGGTTGTTGAAGAAATGAACATTTTAACCACAATCTTCTTGAGATATGATAATGAGAAGATCTTCTATCCAAATTCTGTTCTAGCCACCAAACCCATTAGTAACTACTACAGGAGCCCCGAAATGAGCGACTCGATCGATTTTTCCGTAGACTTCTCCACCTCAATAGAAAGCATTGGAGCACTAAAAGCAAGAATAAAAACATACTTAGAAAGCAAACCGCAGTTCTGGCGACCGAACTACAGTGTCGTAGTGAAAGAAATCGAGAATGTCGACAAAATGAAACTAGCTCTATGTGTTAATCACACCATAAACTTTCAGAACTACGGTGACAAGAGCAATCGTAGATCGGATTTGGTGTTGGAGCTGAAGAAAATTTTCGAAGAACTCGGTATCAAATACCATCTGTTGCCTCAAGAAGTTCAGCTCAACTATGTGAGTTCAGCAGCACCCTCTCAAAGATGA 2289 40.67 MADKKGMEQLVLRILEGDEGVRGSSKDLNKPSVGSFPDFDLKETRSFRCTIPQSVVGSSPSHEISRMTPHKPPKIPGETVTRRASFACSSFTKPKSRLIEPPCPDGASLAEEKALAKSTLYSSSKVDSPAKITTVTSPKEALKATPITPKTPLIGTTGNEEEDDEEVYKTAELKVKEKSGKRLKKTVIVEWVAFLCLTGCLIASLTIETLVTKEIWGLGLWKWCVLVLVIFCGRLFSQWFINCLVFLIERNFLLKRKVLYFVYGLRKSVIIFIWLALVLLAWGLLFDQSSKRSKEGNKILNYVTRALGASLIGAGLWLVKTLLVKILAASFQCTRFFDRIQESIFHQYILRILSGPPLMEMAERVGRAASTGQLSFKHLKKESDDGNEGKEEVIDVDKLKKMKQEKISAWTMRGLINVIRGSGLSTISNTIENFKEEEVEQKDKEINSEWEARAAAYQIFRNVAKPGSKYIDEEDLFRFMSKEEIDNVLPLFEGGAETGKIKRKTLKNWLVNVYVERKSLAHSLNDTKTAIEELNKLSSAVILIVIIIEWLLLMGFLTTQVLVFISSQILLVVFMFGNTARTVFEAIIFVFVMHPFDVGDRCVVDGVQMVVEEMNILTTIFLRYDNEKIFYPNSVLATKPISNYYRSPEMSDSIDFSVDFSTSIESIGALKARIKTYLESKPQFWRPNYSVVVKEIENVDKMKLALCVNHTINFQNYGDKSNRRSDLVLELKKIFEELGIKYHLLPQEVQLNYVSSAAPSQR* 763
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9193429 9196055 + Chy2G035250.1 Chy02g01258 220706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01258 762 MobiDBLite consensus disorder prediction 53 78 - -
Chy02g01258 762 Pfam Mechanosensitive ion channel 536 741 IPR006685 GO:0016020|GO:0055085
Chy02g01258 762 PIRSF Memb_At2g17000 20 762 IPR016688 -
Chy02g01258 762 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 21 757 IPR016688 -
Chy02g01258 762 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 21 757 - -
Chy02g01258 762 SUPERFAMILY Sm-like ribonucleoproteins 585 644 IPR010920 -
Chy02g01258 762 Gene3D - 595 644 IPR023408 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01258 Chy-Chr2:9193429 Chy07g00275 Chy-Chr7:2150206 0 dispersed
Chy01g00654 Chy-Chr1:4659404 Chy02g01258 Chy-Chr2:9193429 0 transposed
Chy05g00620 Chy-Chr5:7539200 Chy02g01258 Chy-Chr2:9193429 0 transposed
Chy11g01095 Chy-Chr11:15977556 Chy02g01258 Chy-Chr2:9193429 0 transposed
Chy02g01258 Chy-Chr2:9193429 Chy07g00274 Chy-Chr7:2141528 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01258 K22048 - csv:101209209 1456.81