Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01277 ATGACGATGAAGAAGAAGGTTACATGGAGGTCATTTCTTCCACCGATCTGCGGCGGCGAGTTGCCGGCAAAGGCGACGAAGAAGGTGGCGGCCAAACAGAGTTCTTTCACTAGAATTTCTCAGCTTGATCTAAGCAATCCCAATTCTCTTCTTTCTGAAGATCTTTCCATATCTTTGGCTGGCTCTAACATTCATATGTTCACTTTGGGAGAGATTAAGGTCATGACACAAACTTTCTCCACTGGTAGTTTCATCGGAGAAGGTGGGTTCGGACCCGTGTATAAAGGCTTCATCGATGATAAGCTCCGTCCTGGCCTCAAGGCTCAGCCTGTCGCCGTCAAGCTCCTGGACTTGGATGGCACTCAGGGCCACCGCGAGTGGTTGACGGAAGTGATATTTTTGGGACAACTACGAGATCCTCATTTGGTGAAATTGATTGGATATTGCTGTGAAGACGAACATAGGGTGTTGGTCTATGAGTACATGCCAAGAGGAAGCTTAGAGAACCAACTCTTTCGAAGATTTTCAGTGTCATTATCATGGTCAACAAGAATGAAAATAGCTTTAGGAGCAGCCAAGGGATTAGCCTTTCTTCATGGAGCTGAAAAACCAGTGATTTATAGAGATTTCAAAGCTTCTAACATTTTGTTAGATTCTGATTACAATGCAAAGCTTTCAGATTTTGGTTTGGCTAAAGATGGACCTGATGGAGATGATACACATGTCTCCACCCGAGTCATGGGTACTGAAGGCTACGCTGCTCCCGAATATATTATGACTGGTCATTTGACGGCAATGAGTGATGTGTACAGTTTCGGAGTAGTACTTTTGGAGTTGTTGACTGGACGACGATCGCTCGAAAAGAGTCGACCACACCGTGAACAAAATTTGGTCGAGTATGCTCGTCCGATGTTGATGGACAACCGAAAGCTTTCTCGGATCATGGACACGAGACTGGAAGGGCAATACTCAGAGACCGGAGCAAGAAAAGCGGCAACATTGGCGTACCAATGTCTGAGCCACCGCCCAAAGCAGAGGCCGACGATGAACGAAGTGGTGAAAATCTTGGAGCCACTTAAGGACTACCAAGACATGCCCATTGGAACCTTTGTTTTCGAGATGCCGGATTCTTCTCCGGTATCATCAAACGGCCATCATAGACAAAATCACGGACACCGACGTTCTAGATCGCGGAATTCGCCATTGACGGAAAATGGAGCGAGCAATGGAAACCGACGACCGACAAGCGGCGGCCGGAGACCATAG 1266 47.08 MTMKKKVTWRSFLPPICGGELPAKATKKVAAKQSSFTRISQLDLSNPNSLLSEDLSISLAGSNIHMFTLGEIKVMTQTFSTGSFIGEGGFGPVYKGFIDDKLRPGLKAQPVAVKLLDLDGTQGHREWLTEVIFLGQLRDPHLVKLIGYCCEDEHRVLVYEYMPRGSLENQLFRRFSVSLSWSTRMKIALGAAKGLAFLHGAEKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPDGDDTHVSTRVMGTEGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSLEKSRPHREQNLVEYARPMLMDNRKLSRIMDTRLEGQYSETGARKAATLAYQCLSHRPKQRPTMNEVVKILEPLKDYQDMPIGTFVFEMPDSSPVSSNGHHRQNHGHRRSRSRNSPLTENGASNGNRRPTSGGRRP* 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9367399 9369201 + Chy2G035440.1 Chy02g01277 220725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01277 421 PANTHER OS01G0588500 PROTEIN-RELATED 24 401 - -
Chy02g01277 421 MobiDBLite consensus disorder prediction 373 421 - -
Chy02g01277 421 Gene3D Phosphorylase Kinase; domain 1 44 161 - -
Chy02g01277 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Chy02g01277 421 MobiDBLite consensus disorder prediction 400 415 - -
Chy02g01277 421 ProSiteProfiles Protein kinase domain profile. 79 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01277 421 Pfam Protein tyrosine and serine/threonine kinase 82 356 IPR001245 GO:0004672|GO:0006468
Chy02g01277 421 SUPERFAMILY Protein kinase-like (PK-like) 64 382 IPR011009 -
Chy02g01277 421 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 24 401 - -
Chy02g01277 421 Gene3D Transferase(Phosphotransferase) domain 1 162 368 - -
Chy02g01277 421 CDD STKc_IRAK 85 359 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g01277 Chy05g01472 CCT
Chy02g01277 Chy05g01472 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01277 Chy-Chr2:9367399 Chy07g01112 Chy-Chr7:16064848 1.42E-152 dispersed
Chy05g00828 Chy-Chr5:11900583 Chy02g01277 Chy-Chr2:9367399 1.12E-15 transposed
Chy07g00379 Chy-Chr7:3047419 Chy02g01277 Chy-Chr2:9367399 2.44E-46 transposed
Chy10g00773 Chy-Chr10:13816082 Chy02g01277 Chy-Chr2:9367399 3.63E-30 transposed
Chy01g02167 Chy-Chr1:26286929 Chy02g01277 Chy-Chr2:9367399 1.10E-154 wgd
Chy02g01277 Chy-Chr2:9367399 Chy05g01472 Chy-Chr5:18455181 0 wgd
Chy02g01277 Chy-Chr2:9367399 Chy07g00286 Chy-Chr7:2330110 7.35E-156 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71072 PF07714 PK_Tyr_Ser-Thr 1.40E-46 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01277 - - csv:101209291 818.535