Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01279 ATGGACTCCGTGCCTAGATTACTCATTCCTTTTCTTCTTCTTCTTCTTCTTTCTTGTGTTTTCATCAATGCCAAGAAAACCTACATTATTCATATGAAACATCATGCTCTCCCATCACAGTATCTCACTCACCATGATTGGTACTCTGCTAATCTTCAATCTCTTTCTTCATCTTCTTCCTCTGACTCTCTTCTTTACACCTACACTTCCTCCTTCCATGGCTTTGCTGCTTTTCTAGATTCTCAGGAAGTGGAATTGCTCCGGCAATCCGATTCGGTTCTGGGTGTTTATGAAGATACAGTTTACAATCTTCATACGACTCGTACTCCCGGATTCCTCGGTCTCGACTCTGATTTCGGGTTATGGGAAGGTCACACCACTCAGGATCTTAACCAAGCTTCTCACGATGTCATCATTGGTGTTCTCGATACTGGGATTTGGCCGGAATCGAAGAGCTTTGATGACACTGGAATGCCGGAGATCCCATCACGGTGGCGTGGAGAATGTGAAGCAGGACCTGATTTTAGTCCTTCCCATTGTAACAAGAAACTAATTGGAGCTCGTAGCTTCTCTAAAGGTTATCAAATGGCTTCCGGTGGTGGGTATTTCAGAAAGCCGAGAGAGAGTGAGTCAGCTAGAGATCAGGATGGGCACGGAACGCACACCGCCAGTACGGCTGCTGGTTCTCATGTGGCTAATGCCAGTTTACTTGGTTATGCTAGAGGCATTGCTAGAGGGATGGCTCCACAAGCGAGAGTTGCTGCTTACAAGACTTGTTGGCCAACTGGTTGCTTTGGATCTGACATTCTTGCCGGTATGGATCGGGCGATAATGGACGGTGTCGATGTACTTTCACTCTCTTTAGGTGGTGGCTCTGCTCCGTATTACAGGGATACCATAGCAATTGGAGCATTTGCAGCTATGGAGAAGGGGGTTTTTGTTTCTTGCTCAGCTGGGAATAGTGGTCCAAACAAGGCTTCTCTGGCCAATGTAGCACCATGGATCATGACGGTCGGAGCTGGAACGCTTGATCGAGACTTCCCAGCTTATGTCCAGCTTGGAAATGGGAAACGGTTCACTGGAGTGTCGCTATACAGTGGGCAAGGAATGGGGAATAAGGCAGTGGCTTTGGTGTATAACAAAGGAAGTAACACCTCCAGTAATATGTGCTTGCCGGGTTCTCTTGAGCCGGCGGTGGTTAGAGGAAAAGTGGTGGTTTGCGACAGAGGAATCAATGCCAGAGTAGAAAAGGGAGGGGTGGTGAGAGATGCTGGTGGGATTGGGATGATTCTGGCAAACACAGCAGCTAGTGGGGAGGAATTGGTGGCTGACAGTCACTTGCTGCCAGCAGTGGCGGTGGGGAGGAAAACTGGCGACTTGATTCGGCAGTATGTTCGATCAGATTCAAATCCAACCGCAGTGTTGAGCTTTGGTGGGACAATTCTGAACGTCCGCCCATCTCCGGTGGTGGCGGCCTTTAGTTCTAGAGGACCAAACTTGGTAACCCCCCAAATCCTAAAGCCGGACGTTATTGGTCCTGGCGTTAACATCTTGGCTGCCTGGTCTGAGTCCATTGGACCTACTGGATTGGAGAATGACAAGAGGAAAACTCAGTTCAATATCATGTCTGGAACTTCCATGTCGTGCCCACATATCAGTGGACTGGCTGCATTGCTGAAGGCAGCTCATCCACAATGGAGTCCAAGTGCAATCAAATCTGCTTTAATGACTACTGCATACACTCAGGACAACACCAACTCGTCTCTCCGGGATGCTGCCGGAGGGGGGTTTTCCAATCCATGGGCTCATGGAGCTGGCCATGTTGATCCTCACAAAGCTCTCTCTCCTGGACTTTTATATGATATCTCAACTAATGACTACATTGCCTTCTTGTGCTCCTTGGACTATGGGATCGATCATGTTCAAGCGATTGTGAAACATCCAAACATAACCTGCTCTAGAAAGTTTGCTGATCCAGGACAACTTAACTATCCTTCATTTTCAGTTGTGTTTGGGAGCAAGAGGGTTGTTCGGTACACTCGTATAGTCACCAATGTTGGGGCTGCAGGGTCAGTTTATGATGTGGCTACTACTGCACCACCGGTTGTGAAGGTGACCGTGAAACCTTCAAAGCTTGTGTTCACTAAAGTTGGGGAGAGGAAGAGGTACACTGTTACATTTGTTGCGAGCAGGGATGCTGCACAAACCACAAGATTTGGGTTTGGATCGATTGTGTGGAGCAATGACCAACACCAAGTTAGAAGCCCTGTGTCATTCGCCTGGACTAGGTTGTGA 2295 48.15 MDSVPRLLIPFLLLLLLSCVFINAKKTYIIHMKHHALPSQYLTHHDWYSANLQSLSSSSSSDSLLYTYTSSFHGFAAFLDSQEVELLRQSDSVLGVYEDTVYNLHTTRTPGFLGLDSDFGLWEGHTTQDLNQASHDVIIGVLDTGIWPESKSFDDTGMPEIPSRWRGECEAGPDFSPSHCNKKLIGARSFSKGYQMASGGGYFRKPRESESARDQDGHGTHTASTAAGSHVANASLLGYARGIARGMAPQARVAAYKTCWPTGCFGSDILAGMDRAIMDGVDVLSLSLGGGSAPYYRDTIAIGAFAAMEKGVFVSCSAGNSGPNKASLANVAPWIMTVGAGTLDRDFPAYVQLGNGKRFTGVSLYSGQGMGNKAVALVYNKGSNTSSNMCLPGSLEPAVVRGKVVVCDRGINARVEKGGVVRDAGGIGMILANTAASGEELVADSHLLPAVAVGRKTGDLIRQYVRSDSNPTAVLSFGGTILNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSESIGPTGLENDKRKTQFNIMSGTSMSCPHISGLAALLKAAHPQWSPSAIKSALMTTAYTQDNTNSSLRDAAGGGFSNPWAHGAGHVDPHKALSPGLLYDISTNDYIAFLCSLDYGIDHVQAIVKHPNITCSRKFADPGQLNYPSFSVVFGSKRVVRYTRIVTNVGAAGSVYDVATTAPPVVKVTVKPSKLVFTKVGERKRYTVTFVASRDAAQTTRFGFGSIVWSNDQHQVRSPVSFAWTRL* 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9390286 9392697 + Chy2G035460.1 Chy02g01279 220727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01279 764 PANTHER CUCUMISIN-RELATED 17 761 - -
Chy02g01279 764 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Chy02g01279 764 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Chy02g01279 764 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Chy02g01279 764 Pfam PA domain 377 460 IPR003137 -
Chy02g01279 764 SUPERFAMILY Subtilisin-like 104 618 IPR036852 GO:0004252|GO:0006508
Chy02g01279 764 Pfam Peptidase inhibitor I9 27 105 IPR010259 -
Chy02g01279 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 105 IPR037045 -
Chy02g01279 764 CDD Peptidases_S8_3 102 580 IPR034197 -
Chy02g01279 764 Gene3D - 631 761 - -
Chy02g01279 764 MobiDBLite consensus disorder prediction 202 225 - -
Chy02g01279 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Chy02g01279 764 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Chy02g01279 764 Gene3D - 344 482 - -
Chy02g01279 764 Pfam Subtilase family 135 585 IPR000209 GO:0006508|GO:0008236
Chy02g01279 764 ProSiteProfiles Serine proteases, subtilase domain profile. 118 614 - -
Chy02g01279 764 SUPERFAMILY Protease propeptides/inhibitors 25 104 - -
Chy02g01279 764 Pfam Fibronectin type-III domain 661 757 IPR041469 -
Chy02g01279 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 761 IPR045051 -
Chy02g01279 764 CDD PA_subtilisin_like 350 473 - -
Chy02g01279 764 Gene3D Peptidase S8/S53 domain 136 627 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00861 Chy-Chr2:5527358 Chy02g01279 Chy-Chr2:9390286 0 dispersed
Chy02g01279 Chy-Chr2:9390286 Chy03g01581 Chy-Chr3:17863086 0 dispersed
Chy09g01158 Chy-Chr9:13808660 Chy02g01279 Chy-Chr2:9390286 0 dispersed
Chy09g01163 Chy-Chr9:13834431 Chy02g01279 Chy-Chr2:9390286 6.91E-125 dispersed
Chy12g00647 Chy-Chr12:9263042 Chy02g01279 Chy-Chr2:9390286 0 dispersed
Chy12g00648 Chy-Chr12:9284851 Chy02g01279 Chy-Chr2:9390286 5.05E-173 dispersed
Chy04g01124 Chy-Chr4:17380867 Chy02g01279 Chy-Chr2:9390286 0 transposed
Chy01g02163 Chy-Chr1:26261165 Chy02g01279 Chy-Chr2:9390286 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01279 - - csv:101209781 1468.37