Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01290 ATGGCTCTCTCCATTTCTTCCACTGCGCTCTCCTCCTTCCCAATCAGAGAATCCCATCACAGATCAAATTTCCCGGGAAATTTCCCAAATCATAAGCTCCGTAGAGATTACTCCGATCTAAAAGCAGCGAAATCCGGCGTGTCTAGCGTTTGTGAACCGCTCCCTCCCGATAGACCCCTTTGGTTTCCTGGCAGCAGCCCGCCGGAGTGGCTCGACGGCAGCCTTCCCGGCGATTTTGGCTTCGATCCGCTTGGATTAGGTTCGGATCCAGAGACACTAAAATGGTTCGCACAAGCAGAACTAATGCACGCAAGATGGGCGATGCTAGCCGTAACAGGAATCCTTCTACCGGAATGGTTCGAGAGCTTAGGACTCATACAAAACTTCTCATGGTACGACGCCGGATCTCGAGAATATTTCGCAGATCCGACGACATTGCTGGTGGCGCAATTGGCGTTGATGGGGTGGGTGGAGGGGAGGCGATGGGCGGACTTGGTGAACCCGGGAAGCGTGGACGTTGACTTGAAGCTGCCCCACAAAAAGAAAGCAAAGGCAGATGTGGGCTACCCGGGGGGGTTCTGGTTTGACCCTATGATGTGGGGCAGGGGGTCGCCGGAGCCGGTCATGGTGCTGAGGACTAAAGAGATTAAGAATGGGCGGTTGGCTATGTTGGCCTTTGTTGGACTGTGGTTTCAAGCTATTTACACTGGCCAAGGACCCCTTGAGAATCTCGCTGCACATGTGGCAGATCCCGGCCATTGCAATATCTTTTCGGCATTTAGTTCTGGTTCGGGTTGA 798 53.51 MALSISSTALSSFPIRESHHRSNFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVTGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGSG* 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9438167 9440182 - Chy2G035570.1 Chy02g01290 220738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01290 265 SUPERFAMILY Chlorophyll a-b binding protein 57 260 - -
Chy02g01290 265 Gene3D Chlorophyll a/b binding protein domain 68 253 - -
Chy02g01290 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 260 IPR001344 GO:0009765|GO:0016020
Chy02g01290 265 Pfam Chlorophyll A-B binding protein 67 233 IPR022796 -
Chy02g01290 265 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 6, CHLOROPLASTIC 1 260 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01290 Chy-Chr2:9438167 Chy10g00781 Chy-Chr10:13858504 3.06E-101 dispersed
Chy02g01290 Chy-Chr2:9438167 Chy02g02491 Chy-Chr2:28417130 3.05E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01290 K08908 - csv:101211430 550.436