Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01376 ATGATGATGATGTTCAACGAGATGGGATTTTGTGATGATATGGGTTTCCTTTCTGCTTCAATTGTGGAAGGAGATGCTGTAGCTCCACCAACCGATCCTGAAGTCGTGGTGGAAGACGATTATTCTGATGAAGAGATCGACTTGGATGAGCTTGAGAGGAGGATGTGGAGGGACAAGATGCGTCTCAAACGTCTTAAAGAGCAAAGCAAGGTTAAGGAAGGGATCGATATTGTGAAGCAACGACAATCTCAAGACCAGGCTAGGAGGAAGAAGATGTCGAGGGCACATGATGCGATCTTGAAATATATGTTGAAGATTATGGAAGTCTGTAATGCTCAAGGTTTTGTATACGGAATAATCCCTGAGAAGGGAAAACCAGTAACCGGGGCATCGGATAATCTGCGAGAGTGGTGGAAAGACAAAGTCAGATTTGATAGAAACGGACCAGCTGCCATAGCCAAGTACCAGGCAGACAATGCAATTCCTGGACGAAATGATGGCTGTAATTCAATCGGTCCAACCCCTCACACCTTGCAGGAACTTCAGGATACCACCTTAGGTTCTCTTTTATCAGCTCTGATGCAGCACTGTGACCCTCCTCAAAGAAGATTTCCATTGGAAAAAGGAGTTCCTCCGCCATGGTGGCCTACTGGAGTCGAGGAATGGTGGCCTCAGCTTGGATTGCCGAAGGACCAAGGTCCTCCGCCCTACAAGAAGCCTCATGACTTGAAGAAAGCTTGGAAAGTAGGTGTTTTGACTGCAGTCATCAAGCATATGTCCCCTGATATAGCCAAGATCCGCAAGCTTGTTAGACAATCCAAGTGTTTGCAGGACAAGATGACTGCCAAGGAGAGTGCTACATGGCTTGCTATTATCAACCAAGAGGAGATCTTGGCCCGAGAGCTTTATCCTGATTCTTGCCCGCCTTTGTCTTCCGCTGGGGGCAGTGGATTGTTGGTCATTAACGATTGTAGTGAATATGATGTAGAAGGCGCTGAGGAGGAACCAAGCTTTGATGTGCAAGATCGTAAACCTGATAATCACAGCTCATTCAACGTGGGGATGGACAGAATGAGAGATCGGGTGTCCCTTCGACAACCACCTTATGCAATGAAAGGAGAGGTTACTACAAACTTGGATTTTATGCGAAAGAGGAAACCAACCAGTGATTTGAACATGATGATGGATCAGAAGATCTATACATGTGAGTTCCTCCAATGTCCTTATAGCGAACTTCGTCTCGGGTTTAATGACAGGACATCCAGAGACAATCATCAGTTGACCTGCCCATATAGAACTTCAGAATTCAGTGGCTCAAGTTTTCATGTCAATGAGGTCAAACCAGTTATCTTCCCTCAGTCATTTGCCCCGCCCAAGTCAAATCCACCTCCGGTCAGCTCAGTTCCGTCATCTTTCGACCTGTCCACTTTAGGCGTTCCAGAAGATGGCCAAAAGCTGATCAGTGAGCTCATGTCGATCTACGACACCAACATCCAAGGAAACAAGAACAACTTAAACACTGGTAACAGTGCCACCACGGAGAACCAAAATCTCCCTCAATTAAAGATTCAACCTCAACAAGACGATTACTTCCGCAATCAAGGTCTAATGATCGAGGGGAACTTCTTTGATGGCTCGAATGTTTCGAGCAGCCATCAAATGTTCACAAGAGATGAAGGTCAATTCGACCGATTTAAGCCAATGAATACGCCTTTTGAAAACAACCACCATCATCACAACAATAACAACAACAACAACAACAGCAACTTCCACTTGATGTTTAGCTCTCCGTTTGATTTGTCGACCTTCGACTACAAAGAAGAAGTACCCGGCGTAGCAGCCAACGACACACTGTCGAAACAGCAGGATATTCCATTATGGTATCATTGA 1890 45.56 MMMMFNEMGFCDDMGFLSASIVEGDAVAPPTDPEVVVEDDYSDEEIDLDELERRMWRDKMRLKRLKEQSKVKEGIDIVKQRQSQDQARRKKMSRAHDAILKYMLKIMEVCNAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGRNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGVEEWWPQLGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEILARELYPDSCPPLSSAGGSGLLVINDCSEYDVEGAEEEPSFDVQDRKPDNHSSFNVGMDRMRDRVSLRQPPYAMKGEVTTNLDFMRKRKPTSDLNMMMDQKIYTCEFLQCPYSELRLGFNDRTSRDNHQLTCPYRTSEFSGSSFHVNEVKPVIFPQSFAPPKSNPPPVSSVPSSFDLSTLGVPEDGQKLISELMSIYDTNIQGNKNNLNTGNSATTENQNLPQLKIQPQQDDYFRNQGLMIEGNFFDGSNVSSSHQMFTRDEGQFDRFKPMNTPFENNHHHHNNNNNNNNSNFHLMFSSPFDLSTFDYKEEVPGVAANDTLSKQQDIPLWYH* 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10329711 10331600 - Chy2G036430.1 Chy02g01376 220824

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01376 629 MobiDBLite consensus disorder prediction 334 353 - -
Chy02g01376 629 Gene3D - 81 158 IPR023278 GO:0003700|GO:0005634
Chy02g01376 629 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 2 628 IPR006957 GO:0005634
Chy02g01376 629 Pfam Ethylene insensitive 3 49 296 IPR006957 GO:0005634
Chy02g01376 629 MobiDBLite consensus disorder prediction 336 353 - -
Chy02g01376 629 Gene3D - 173 306 IPR023278 GO:0003700|GO:0005634
Chy02g01376 629 SUPERFAMILY DNA-binding domain of EIN3-like 175 299 IPR023278 GO:0003700|GO:0005634
Chy02g01376 629 Coils Coil 48 68 - -
Chy02g01376 629 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 2 628 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01376 K14514 EIN3; ethylene-insensitive protein 3 - csv:101206055 1186.02
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01376 Chy-Chr2:10329711 Chy02g01432 Chy-Chr2:11375566 5.18E-133 dispersed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Chy02g01376 . 2 628 EIL Transcription Factor Family AT2G27050 58.1 2.1e-189 659.1
Chy02g01432 . 44 350 EIL Transcription Factor Family AT2G27050 59.3 2.3e-95 346.7
Chy02g01432 . 44 578 EIL Transcription Factor Family AT1G73730 54.7 3.0e-145 512.3
Chy02g01376 . 36 334 EIL Transcription Factor Family AT1G73730 62.2 3.4e-104 375.9
Chy07g01327 . 23 271 EIL Transcription Factor Family AT1G73730 54.7 1.1e-75 281.2
Chy02g01376 . 3 628 EIL Transcription Factor Family AT3G20770 62.3 1.4e-207 719.5
Chy02g01432 . 44 292 EIL Transcription Factor Family AT3G20770 69.7 1.8e-98 357.1
Chy02g01432 . 83 288 EIL Transcription Factor Family AT5G65100 59.8 1.1e-70 264.6
Chy07g01327 . 21 368 EIL Transcription Factor Family AT5G10120 57.4 5.4e-103 371.7
Chy02g01432 . 44 290 EIL Transcription Factor Family AT5G10120 55.6 1.5e-73 273.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001004 3 9 2 2 3 2 4 2 2 1 2 2 4 2 2 4 2 6 4 2 2 2 2 2 2 2 2 3 4 2 83
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17541 PF04873 EIN3 1.70E-128 No_clan Chy TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy02g01376 Chy_Chr02 FPKM 37.072536 37.294983 70.35302 66.91803 398.561035 472.417084 377.377167 53.802383 59.899471 50.723534