Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01423 ATGGCTGGCAAAGCTCAAATTCCAACCAAGAATTCAGCGCTTATTTCTATGATTGCTGATGAGGATACGGTGGTTGGATTTCTTCTTGCTGGAGTTGGTAATGTCGACCTGCGAAGAAAAACTAATTACCTTATAGTGGACTCAAAGACGACTGTTAAACAAATTGAAGACGCTTTCAAAGAGTTCACTACAAGGGAGGATATTGCAATAGTGATGATTAGTCAATATGTTGCAAACATGATCAGGTTTCTGGTAGATAGCTATAACAAGCCAATTCCTGCAATATTGGAGATTCCTTCCAAGGATCATCCATATGATCCTGCTCATGATTCAGTTCTTTCACGAGTAAAGAACCTGTTTTCTACCGAATCGGTGGCGTCCGGGAGGTATTAA 393 40.46 MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLFSTESVASGRY* 131
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11213258 11215477 + Chy2G036900.1 Chy02g01423 220871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01423 130 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 1 129 - -
Chy02g01423 130 Pfam ATP synthase (F/14-kDa) subunit 15 116 IPR008218 GO:0034220|GO:0046961
Chy02g01423 130 TIGRFAM V_ATP_synt_F: V-type ATPase, F subunit 11 124 IPR005772 GO:0033180|GO:0046961|GO:1902600
Chy02g01423 130 Gene3D ATPase, V1 complex, subunit F 9 122 IPR036906 GO:0034220
Chy02g01423 130 SUPERFAMILY AtpF-like 15 118 IPR036906 GO:0034220
Chy02g01423 130 PIRSF V-ATP_synth_F 3 123 IPR005772 GO:0033180|GO:0046961|GO:1902600
Chy02g01423 130 PANTHER V-TYPE PROTON ATPASE SUBUNIT F 1 129 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01423 K02151 - csv:101215239 254.603