Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01451 ATGTGTCAGATGATCACCGGGTCTGAAGGTATGCAGTCAAAGTCTGAAACCAATAATCAGCTCGATCCAAATGGTGCACCATCGACAAGTATCTATTATGAACCCTGGTGGCGTGGCATGGGGTACAATACTTTTCCATTACCTGTGGTTGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCAAATGATGGCCAATCTGTGTCTAATAATGATATAAATGATGAAGAAGATGATGTTTCTAAAGAAGTGCAAGCTACTGGATCTCCACATTCTGCAGGAAGCTACAGACAGGATCCTCAGAAGATGCAGCATGTTTCGTCCACTTTGCCAGCAATGCACGGTGAATGTCTGGCACAGTCTACACAACTCGAACTTGTTGGTCACTCTATTGCTTGTGCATCAAATCCTTATCAGGATGCATATTATGGAGGAATGATGGCCTTCTATGGTCATCAGCCCTTGGGCTATCCGATGGTTGGAGGACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTCGTGAATGCAAAGCAATACCAGGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAATCGATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACACCAGCACGCCATTAGAAGGTCGAGAAGTAGTGGAGGCCGTTTTGCGAAGAAAAACGAAGCTGAGGGAAAGGAAAAACATTCTGATAAAGTAAACGAGAGTGGTTACTGCCTAAATGACGGTTCTGAACAGCAGAACGGAAGCTCCTTGACGAACAAGGCCTCCGAGTAG 840 45.6 MCQMITGSEGMQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDINDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDAYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEAEGKEKHSDKVNESGYCLNDGSEQQNGSSLTNKASE* 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11583601 11587568 - Chy2G037180.1 Chy02g01451 220899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01451 279 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 184 238 IPR001289 GO:0003700|GO:0006355
Chy02g01451 279 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 41 271 IPR001289 GO:0003700|GO:0006355
Chy02g01451 279 MobiDBLite consensus disorder prediction 236 256 - -
Chy02g01451 279 ProSitePatterns NF-YA/HAP2 subunit signature. 186 206 IPR018362 GO:0003677|GO:0016602
Chy02g01451 279 MobiDBLite consensus disorder prediction 206 279 - -
Chy02g01451 279 MobiDBLite consensus disorder prediction 258 279 - -
Chy02g01451 279 Gene3D - 181 243 - -
Chy02g01451 279 MobiDBLite consensus disorder prediction 92 114 - -
Chy02g01451 279 PRINTS CCAAT-binding transcription factor subunit B signature 184 206 IPR001289 GO:0003700|GO:0006355
Chy02g01451 279 PRINTS CCAAT-binding transcription factor subunit B signature 215 238 IPR001289 GO:0003700|GO:0006355
Chy02g01451 279 MobiDBLite consensus disorder prediction 216 235 - -
Chy02g01451 279 MobiDBLite consensus disorder prediction 1 27 - -
Chy02g01451 279 SMART cbf3 180 241 IPR001289 GO:0003700|GO:0006355
Chy02g01451 279 ProSiteProfiles NF-YA/HAP2 family profile. 181 241 IPR001289 GO:0003700|GO:0006355
Chy02g01451 279 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9 41 271 - -
Chy02g01451 279 MobiDBLite consensus disorder prediction 55 114 - -
Chy02g01451 279 MobiDBLite consensus disorder prediction 55 77 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g01451 Chy05g00137 CCT
Chy02g01451 Chy05g00137 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01451 Chy-Chr2:11583601 Chy05g00137 Chy-Chr5:1065847 2.78E-93 dispersed
Chy01g01861 Chy-Chr1:24038802 Chy02g01451 Chy-Chr2:11583601 9.13E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17546 PF02045 CBFB_NFYA 4.20E-25 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01451 K08064 - csv:101212860 521.931