Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01488 ATGTTTCAAGATGAAGGTACATCCTCCATAACTTCCTCTCCTCTTCAGTTCTTCACAATGATGTCTCTTTCCCCTAAATTGGGTTCTCCATATCCATGGCTTAGAGAGCTTAAATCTGAGGAGAGGGGTTTGTATTTAATCCATTTGTTGCTTACTTGTGCAAATCATGTGGCTGTTGGTAGTCTTGACAGTGCTAATCTTGCCCTTGATCAAATATCCCATCTTGCTTCTCCAGATGGTGATACAATGCAGCGAATTGCGGCTTATTTCGCCGAGGCTCTCGCGGATAGGATCCTCAAGACTTGGCCTGGTCTTTACAAGGCCTTTAACTCTACTAAGATACCAATGGTGTCAGAAGAGATTCTAGTTAAGAAATTGTTCTTTGATTTGTTTCCATTCCTCAAGGTGGCTTTTGTGCTTACTAATCAAGCTATTGTTGAAGCCATGGAGGGGGAAAAGATGATTCATATTATTGATCTCAATGCTAATGAAACTGCTCAATGGCTTGCTCTTTTGCAAGTTTTGAGTGTGAGGCCTGAAGGACCTCCACATTTGAGAATCACTGGAGTTCATCCACGCCAAGAGATTCTGGATCAAATGGCTCGTAGGTTGACCAATGAAGCCGAGAAATTGGATATCCCGTTTCAATTCAATTCCGTTGTCAGTCGACTAGAGGATCTTGATATGGAAAAGCTTCGTGTGAAAACCGGGGAGGCTCTGGCTATCAATTCAGTTCTTCAGTTGCACAACCTTTTGGGATATGATAATGAAGCCTTGCAAAAGCCATCTCCATCTGCAGCCAAGAATATAAATGGAGTTCAATACTCGAGATACCCGCATCGGAACCAAACCACATTGAGCGAATTACTCGACAAGGATATGGTTAATGGATGCAGTCCAAGTCCCGATTCAGTTTCCTCATCAGCACTATCTCAGGCTAATGCGACGAAAATCGACAGTTTTTTGAATGGATTGTGGAGTTTGACGCCGAAGGTGATGGTCGTAACGGAACAAGATTCTAACCATAACGGTACAACAGTTATGGAGAGATTATTGGAAGCTCTCCACACATATGCAGCTATCTTTGATTGTTTGGAGTCTAACATGTCAAGAACATCCCTGGAGAGGTTGAAGTTGGAAAAGATGCTATTTGGGGAAGAGATTAAGAACATCATAGCTTGTGAGGGAGCTGAAAGGAAGGAACGGCATGAAAAACATGAGACATGGAGTCAGCGGTTCGATGTCGCCGGGTTTAGGCAAGTGTCTTTGAGTTATTATGGAATGCTGCAGGCTCGGAGCTTGCTGCAGGGGTATGGTTGTGGTGGTTATAGGATGAAGGAAGAGAATGGCTGTGTGATGATTTGTTGGCAAGACCGTCCATTGTTTTCGGTTTCGGCTTGGAGATGTTGTAAGTAG 1416 43.5 MFQDEGTSSITSSPLQFFTMMSLSPKLGSPYPWLRELKSEERGLYLIHLLLTCANHVAVGSLDSANLALDQISHLASPDGDTMQRIAAYFAEALADRILKTWPGLYKAFNSTKIPMVSEEILVKKLFFDLFPFLKVAFVLTNQAIVEAMEGEKMIHIIDLNANETAQWLALLQVLSVRPEGPPHLRITGVHPRQEILDQMARRLTNEAEKLDIPFQFNSVVSRLEDLDMEKLRVKTGEALAINSVLQLHNLLGYDNEALQKPSPSAAKNINGVQYSRYPHRNQTTLSELLDKDMVNGCSPSPDSVSSSALSQANATKIDSFLNGLWSLTPKVMVVTEQDSNHNGTTVMERLLEALHTYAAIFDCLESNMSRTSLERLKLEKMLFGEEIKNIIACEGAERKERHEKHETWSQRFDVAGFRQVSLSYYGMLQARSLLQGYGCGGYRMKEENGCVMICWQDRPLFSVSAWRCCK* 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 12245861 12247276 - Chy2G037550.1 Chy02g01488 220936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01488 471 Pfam GRAS domain family 46 468 IPR005202 -
Chy02g01488 471 PANTHER SCARECROW-LIKE PROTEIN 3 2 470 IPR030008 GO:0003700|GO:0005634|GO:0009739
Chy02g01488 471 ProSiteProfiles GRAS family profile. 37 468 IPR005202 -
Chy02g01488 471 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 470 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01488 Chy-Chr2:12245861 Chy10g01343 Chy-Chr10:17711281 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17548 PF03514 GRAS 1.10E-139 CL0063 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01488 - - csv:101215435 914.835