Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01569 ATGGCCACTCAGGCTCTTGTTTCTTCTTCTTTAACCTCTTCAGTGGGTGCTGCCAGACAGAGATTAGGGGCAAAACCTTCTTTTGGATCTTCCAGGAAATCAGCTTCTTTTGTTGTTAGAGCTGAAGCCACTCCTCCTGTTAAGGTTGCTTTTCTTTTCCTTTCTTTCTTTTTATCTATGTGGGTTGTTAATTCACCAAGTTTAATATGCAAGGAGCAGACAGGCAACTCTGGTTCGCTTCAAAACAAAGTCTTTCTTACTTGGATGGAAGGCGATTACGGGTTTGACCCATTGGGGCTATCTGATCCCGAAGGCACAGGAGGGTTCATCGAGCCAAGATGGTTGGCATACGGCGAAGTGATCAATGGAAGGTTTGCAATGTTGGGAGCAGCAGGAGCCATAGCCCCAGAGATCTTTGGATCACTAGGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACAGGGGTCATCCCACCAGCAGGGACCTACAACTATTGGGCAGACCCTTACACACTCTTTGTATTTGAAATGGCTCTGATGGGCTTCGCTGAACACAGAAGATTTCAAGATTGGGCCAAGCCAGGGTCCATGGGAAAACAATACTTTTTGGGCCTAGAGAAGTTCTTGGGTGGATCAGGGGACCCAGCTTACCCTGGTGGGCCATTGTTCAACCCACTAGGATTTGGGAAAGATGAGAAGTCAATGAAGGAATTGAAGTTGAAGGAAATTAAGAATGGAAGGCTTGCAATGTTGGCAATTTTGGGTTACTTTATACAAGGTCTTGTTACTGGTGTTGGACCTTACCAAAACCTTTTGGATCATTTGTCTGACCCTGTCAACAACAATGTTTTGACCAGCCTTAAATTCCATTAG 879 45.51 MATQALVSSSLTSSVGAARQRLGAKPSFGSSRKSASFVVRAEATPPVKVAFLFLSFFLSMWVVNSPSLICKEQTGNSGSLQNKVFLTWMEGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH* 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13904381 13906005 - Chy2G038360.1 Chy02g01569 221017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01569 292 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 291 - -
Chy02g01569 292 SUPERFAMILY Chlorophyll a-b binding protein 88 288 - -
Chy02g01569 292 Pfam Chlorophyll A-B binding protein 89 261 IPR022796 -
Chy02g01569 292 Gene3D Chlorophyll a/b binding protein domain 79 291 - -
Chy02g01569 292 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 291 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01569 Chy-Chr2:13904381 Chy03g01543 Chy-Chr3:17608116 7.37E-47 dispersed
Chy07g00436 Chy-Chr7:3342271 Chy02g01569 Chy-Chr2:13904381 1.33E-23 dispersed
Chy02g01569 Chy-Chr2:13904381 Chy02g02491 Chy-Chr2:28417130 8.12E-39 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01569 K08909 - csv:101202993 488.419