Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy02g01672 | ATGGACCACTTTGGCCACCTCACAGATGATGGTGTTCTCGTTGATGCCAATGCTGGAAGCTTTGCCCAATCACGACCTTCCAAGAGACGGAGAAATGGGTGGATCCCTACAAAGGATTCCCATTCCCCCATTCTTTCTTCTCCTTCCCTCACCATTCCTCCTGGAATCAACCCGACTCTGTTGCTTGATTCCCCTGTTATGCTTCTCAATACACAGGATTTGCCATCTCCAACCACTGGTACTTTTCCTCCCATACATCAAATAAAGGACGAACAATCATTGTTGAATCCTGTAATGCCAGAAGATGGAATTAGCCACGGTAGTGAGGATTCCTACTTCAGGTTCCCACCTCAGGGGGAGCTTTGCACTCTTCAAAGTCTTCTGAGGATTGAAAATCAGGAAGCTGAAATTGATCATCAAGCCCTTGAATCGGAGAAAACGCTGATGGATTTTGAATTCGTACCTGATATTCCAAAAGAGGCTTCTGTATTGAAATATGAAATTGCACCATCCACTGACAATAGTTATTTTGATGGCAAGATTGTTAATGGCAACTGTGAGAATATGGAAAGTTGTCTTTCTTCTATAACTACTAATCAACCACGTATACATGAAGAATCGACACAAGGAGATGACATTGACACGCAGCATCCTTTAGAAGATGAACAAAAAGGGTCTTACATTCCTATGGGAATGTTAAGGACATCAGAAGATGGATACAACTGGAGGAAATATGGACAGAAACAGGTCAAAGGTAGCGAATATCCAAGAAGCTACTATAAATGTACGCATCCAAATTGTCTAGTAAAGAAAAAGGTGGAGCGATCTCTTGATGGTCAAATAACTGAAATCATCTATAAGGGTGCTCATAATCATGCAAAACCTGATCCCAATCGTCGAGCCATGGTTGGATCTGTGCCAATTTCAGGGGATACTCCAGAAATTGGTGAAGGTGGTGGAAACCATTCCAAACTTGAAGCTGGGCTGACGTGGAGAAACTCTCAATATGGGGTGAAGGATATCAAACCTATCTCAAATTGTAGTGTTGATGGTCTAGAGAGGATTCCCTCTGTGTCAGTTTTGAGTGAACTTTCTGATCCATTGTTAAATCCCCAAGAGAAAACTGTTGGGGTTCTTGAACCGGTAGGAACACCTGAGCTTTCATCCACACTTGCCAGTCATGATGATGATAATGGTGGTGGTGGTGACGATGATCTAACAACTCAGGGAAGCATTTCAGTTTGCACAGAAGCTGATGATGTCGAACCTGAATTGAAAAGAAGGCGAAAAGAGGATAGTTCAATTGAGACAAACTTGGCTTCAAGATCTGTACGTGAACCGAGAGTAGTTGTCCAAATTGAAACTGAAGTTGACATACTTGAAGATGGGTATCGGTGGCGGAAATATGGTCAAAAAGTTGTCAAAGGAAATCCAAATCCAAGGAGCTACTACAAATGCACGAGTGCAGGCTGCTTAGTAAGGAAACATGTTGAGAGAGCATCACATGATCTGAAATGTGTCATTACAACATACGAAGGGAAACACAATCATGAAGTGCCAGCAGCAAGAAATAGCAGTCAAGTAAACTCGGGTAATGGCAATGCCCAACCGCCTGCTTCTCATGTGCAACCAAACATGGGTTTGTCCAGAAACTCAAACGTCCCAAAGTCCGAAACAGAAATTCAAGATCTTGCCACCCATTTTTATCCAAAACCAGAATTTAACCATGACTATCAAAGGTCTGGTTTTGACACTTTTACAAACGATATGAAACTTGGAGCTCCTCCATTCTGTCAAATGAAGTTCCCTCCACTCCGGAACACCTTGCCATACAGTACCTTTGGATTAAGTTCAAAGCATACTGCAACAGGTATCTCTGGGTCTTTGGCATCTGTGGTCTCGGACTTTCCGATTTCTTTGCCATTGAACCAAAAACTTTCGGCTGCTGGTTACGATTATACCAATGGAAGACCAATACTACCATTTCAGGTTTTTTTGGCTGGTCAGCAGCTGAGGGAGACGGATAGATTCCTCACACCCAAACAGGAGCACGACGATGATAACATCTGTGCTTCATTCCAACCATTACTGATGACCATTGCAGAACAGACAATTCAGGTGATGAAGAATGCCCATAGGAGATCATATCACTTCTCAGTTGGCTATTTTGCTCAATGCTGCCTTCCACATCAGAGCCTCCGTCGGAGTGGTTTTGCGTTGCTTTGCTTATATGTTTGTGAGAGAGGGATTTCCAAATATTACAACAAAAGAAAGCCCTTGTTCCCACGGCTGCCACCCGGTCCAAAGCCATGGCCTATCCTTCGCAGCTGCCTACCATTAATGTTGTCAAGGAACAAACGCTCACCAACACACCAATGGATTCGTACAGTAATGAAGCAGTTGAACACTGAAATTGCCTGCATCCATCTCGGATCAAATACTCACATAATTATTGTGACTTCTCCAGAACTCGCTCTTGAATTTCTAAAGACACATGATTCAGTCTTTGCATCACGACCCATTGCCAGCACCGCTGAGATATTGAGTTGCGGATTTCTTAGTACAGTTCTTTCACCAACGGGGGATCAATGGAAGAAGATGAAAAGAATCCTTGCTTCTCATGTTCTCAATCCATCGACCCTCCATCAAATGTGTGGCCAAAGGATGAAGGAAGCTGACGCTCTTCTATGTTACATCTTCGACCACACCAGTAGATGTGAAGCGATCAACATAAGAAGCATTACACAACATTATTGTACCAACATTATTAGAAGAATGATATTCAATAGAAGATACTATAGAGAAGGGAGGGAAAATGAGGGTCCATCTTTTGAAGAAGAAGACTATAATCAAGCATTGCTTACAATTTTAATGCATCTTTATTCGTTTTCTATATCAGAATTTATTGCTTGTTTGAAGCCTTTTGATCTAGGTGGACATCAAAAGATGATAAAGAGGGCTTTGAAAGTCATATCAAACCATGACGGACCAATTATAGAGGAAAGAGTGCAAGAATGGAGAGATGGAAAGAAAAAGGAGGTGGAGGACATTCTTGATATTCTTATCACACTTAAAAAAGAGAATGGTGAATCGTTGTTGTCAATTGAAGAGATTAAGGCTCAAATCACGGAGCTGCAACTCGCAACGATAGATAATCCGTCAAACGCAGTAGAGTGGGCAATGATAGAGTTACTTAATCAACCAAAAATTCTCCAAAAAGCTGTTGAAGAATTAGACAAAGTAGTTGGAAGAGATAGGTTGGTCCAAGAATTTGACATCCCTAATCTCAAGTATCTCACAGCTTGTATAAGAGAATCTTTTCGACTTCATCCATTTTCCCCCTTCAACCTTCCTCATGTTTCCAACTCGGACATTGTTGTGGGTGGATACTTCATCCCAAAAGGTAGCCAAATTTTGCTATGTCGTGTGGGGCTTGGCCGAAATCCAAGGATTTGGGAGGATCCAATGAGATTTGACCCAGAACGACATCTAAGAGATGAGACAGTTAAATTTGGGCTATCAGAACCTAGTCTTCGATTCATCACCTTCACTAGAGGAAGGAGGGGTTGCATTGGCAGCTCACTTGGCACTAACATTACCATGATGTTATTTGCTAGACTTCTACAAGGATTTTCATGGAGTTTATTGCCAGGTATCACAAAGATAGATTTCTCCGAAACTGATGAGCTCTTTCTTTCAAACCCATTGCATCTATGTGCAAAACCACGTTTATCTCCTATTATGTATCAAACAACTAATTGCTCATGA | 3768 | 41.88 | MDHFGHLTDDGVLVDANAGSFAQSRPSKRRRNGWIPTKDSHSPILSSPSLTIPPGINPTLLLDSPVMLLNTQDLPSPTTGTFPPIHQIKDEQSLLNPVMPEDGISHGSEDSYFRFPPQGELCTLQSLLRIENQEAEIDHQALESEKTLMDFEFVPDIPKEASVLKYEIAPSTDNSYFDGKIVNGNCENMESCLSSITTNQPRIHEESTQGDDIDTQHPLEDEQKGSYIPMGMLRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCLVKKKVERSLDGQITEIIYKGAHNHAKPDPNRRAMVGSVPISGDTPEIGEGGGNHSKLEAGLTWRNSQYGVKDIKPISNCSVDGLERIPSVSVLSELSDPLLNPQEKTVGVLEPVGTPELSSTLASHDDDNGGGGDDDLTTQGSISVCTEADDVEPELKRRRKEDSSIETNLASRSVREPRVVVQIETEVDILEDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCLVRKHVERASHDLKCVITTYEGKHNHEVPAARNSSQVNSGNGNAQPPASHVQPNMGLSRNSNVPKSETEIQDLATHFYPKPEFNHDYQRSGFDTFTNDMKLGAPPFCQMKFPPLRNTLPYSTFGLSSKHTATGISGSLASVVSDFPISLPLNQKLSAAGYDYTNGRPILPFQVFLAGQQLRETDRFLTPKQEHDDDNICASFQPLLMTIAEQTIQVMKNAHRRSYHFSVGYFAQCCLPHQSLRRSGFALLCLYVCERGISKYYNKRKPLFPRLPPGPKPWPILRSCLPLMLSRNKRSPTHQWIRTVMKQLNTEIACIHLGSNTHIIIVTSPELALEFLKTHDSVFASRPIASTAEILSCGFLSTVLSPTGDQWKKMKRILASHVLNPSTLHQMCGQRMKEADALLCYIFDHTSRCEAINIRSITQHYCTNIIRRMIFNRRYYREGRENEGPSFEEEDYNQALLTILMHLYSFSISEFIACLKPFDLGGHQKMIKRALKVISNHDGPIIEERVQEWRDGKKKEVEDILDILITLKKENGESLLSIEEIKAQITELQLATIDNPSNAVEWAMIELLNQPKILQKAVEELDKVVGRDRLVQEFDIPNLKYLTACIRESFRLHPFSPFNLPHVSNSDIVVGGYFIPKGSQILLCRVGLGRNPRIWEDPMRFDPERHLRDETVKFGLSEPSLRFITFTRGRRGCIGSSLGTNITMMLFARLLQGFSWSLLPGITKIDFSETDELFLSNPLHLCAKPRLSPIMYQTTNCS* | 1256 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 16368321 | 16401327 | + | Chy2G039390.1 | Chy02g01672 | 221120 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy02g01672 | 1255 | Pfam | WRKY DNA -binding domain | 237 | 292 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy02g01672 | 1255 | Pfam | WRKY DNA -binding domain | 461 | 518 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy02g01672 | 1255 | MobiDBLite | consensus disorder prediction | 205 | 221 | - | - | |
Chy02g01672 | 1255 | MobiDBLite | consensus disorder prediction | 18 | 50 | - | - | |
Chy02g01672 | 1255 | SUPERFAMILY | WRKY DNA-binding domain | 453 | 520 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy02g01672 | 1255 | Gene3D | WRKY domain | 231 | 296 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy02g01672 | 1255 | MobiDBLite | consensus disorder prediction | 385 | 443 | - | - | |
Chy02g01672 | 1255 | MobiDBLite | consensus disorder prediction | 419 | 436 | - | - | |
Chy02g01672 | 1255 | ProSiteProfiles | WRKY domain profile. | 231 | 295 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy02g01672 | 1255 | SUPERFAMILY | Cytochrome P450 | 762 | 1243 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Chy02g01672 | 1255 | SUPERFAMILY | WRKY DNA-binding domain | 234 | 295 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy02g01672 | 1255 | MobiDBLite | consensus disorder prediction | 200 | 222 | - | - | |
Chy02g01672 | 1255 | Gene3D | Cytochrome P450 | 750 | 1242 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Chy02g01672 | 1255 | MobiDBLite | consensus disorder prediction | 519 | 554 | - | - | |
Chy02g01672 | 1255 | Pfam | Cytochrome P450 | 765 | 1235 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Chy02g01672 | 1255 | SMART | WRKY_cls | 460 | 519 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy02g01672 | 1255 | SMART | WRKY_cls | 236 | 294 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy02g01672 | 1255 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 36 | 675 | IPR044810 | GO:0003700 | |
Chy02g01672 | 1255 | PANTHER | WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 | 36 | 675 | - | - | |
Chy02g01672 | 1255 | Gene3D | WRKY domain | 447 | 513 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy02g01672 | 1255 | ProSiteProfiles | WRKY domain profile. | 455 | 520 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy02g01672 | 1255 | Coils | Coil | 125 | 145 | - | - | |
Chy02g01672 | 1255 | MobiDBLite | consensus disorder prediction | 520 | 554 | - | - | |
Chy02g01672 | 1255 | PRINTS | E-class P450 group I signature | 918 | 936 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Chy02g01672 | 1255 | PRINTS | E-class P450 group I signature | 1190 | 1213 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Chy02g01672 | 1255 | PRINTS | E-class P450 group I signature | 1100 | 1118 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Chy02g01672 | 1255 | PRINTS | E-class P450 group I signature | 1141 | 1165 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Chy02g01672 | 1255 | PRINTS | E-class P450 group I signature | 1057 | 1083 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Chy02g01672 | 1255 | PRINTS | E-class P450 group I signature | 799 | 818 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Chy02g01672 | 1255 | PRINTS | E-class P450 group I signature | 1180 | 1190 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g00511 | Chy-Chr1:3690925 | Chy02g01672 | Chy-Chr2:16368321 | 3.76E-64 | dispersed | |
Chy02g01672 | Chy-Chr2:16368321 | Chy10g00292 | Chy-Chr10:7338207 | 0 | dispersed | |
Chy09g00217 | Chy-Chr9:1819693 | Chy02g01672 | Chy-Chr2:16368321 | 2.37E-14 | dispersed | |
Chy11g01398 | Chy-Chr11:20393355 | Chy02g01672 | Chy-Chr2:16368321 | 8.92E-15 | dispersed | |
Chy02g01672 | Chy-Chr2:16368321 | Chy06g01876 | Chy-Chr6:22629322 | 6.89E-90 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17551 | PF00067 | p450 | 1.10E-79 | No_clan | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy02g01672 | K18835 | - | csv:101206605 | 1243.8 |