Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01672 ATGGACCACTTTGGCCACCTCACAGATGATGGTGTTCTCGTTGATGCCAATGCTGGAAGCTTTGCCCAATCACGACCTTCCAAGAGACGGAGAAATGGGTGGATCCCTACAAAGGATTCCCATTCCCCCATTCTTTCTTCTCCTTCCCTCACCATTCCTCCTGGAATCAACCCGACTCTGTTGCTTGATTCCCCTGTTATGCTTCTCAATACACAGGATTTGCCATCTCCAACCACTGGTACTTTTCCTCCCATACATCAAATAAAGGACGAACAATCATTGTTGAATCCTGTAATGCCAGAAGATGGAATTAGCCACGGTAGTGAGGATTCCTACTTCAGGTTCCCACCTCAGGGGGAGCTTTGCACTCTTCAAAGTCTTCTGAGGATTGAAAATCAGGAAGCTGAAATTGATCATCAAGCCCTTGAATCGGAGAAAACGCTGATGGATTTTGAATTCGTACCTGATATTCCAAAAGAGGCTTCTGTATTGAAATATGAAATTGCACCATCCACTGACAATAGTTATTTTGATGGCAAGATTGTTAATGGCAACTGTGAGAATATGGAAAGTTGTCTTTCTTCTATAACTACTAATCAACCACGTATACATGAAGAATCGACACAAGGAGATGACATTGACACGCAGCATCCTTTAGAAGATGAACAAAAAGGGTCTTACATTCCTATGGGAATGTTAAGGACATCAGAAGATGGATACAACTGGAGGAAATATGGACAGAAACAGGTCAAAGGTAGCGAATATCCAAGAAGCTACTATAAATGTACGCATCCAAATTGTCTAGTAAAGAAAAAGGTGGAGCGATCTCTTGATGGTCAAATAACTGAAATCATCTATAAGGGTGCTCATAATCATGCAAAACCTGATCCCAATCGTCGAGCCATGGTTGGATCTGTGCCAATTTCAGGGGATACTCCAGAAATTGGTGAAGGTGGTGGAAACCATTCCAAACTTGAAGCTGGGCTGACGTGGAGAAACTCTCAATATGGGGTGAAGGATATCAAACCTATCTCAAATTGTAGTGTTGATGGTCTAGAGAGGATTCCCTCTGTGTCAGTTTTGAGTGAACTTTCTGATCCATTGTTAAATCCCCAAGAGAAAACTGTTGGGGTTCTTGAACCGGTAGGAACACCTGAGCTTTCATCCACACTTGCCAGTCATGATGATGATAATGGTGGTGGTGGTGACGATGATCTAACAACTCAGGGAAGCATTTCAGTTTGCACAGAAGCTGATGATGTCGAACCTGAATTGAAAAGAAGGCGAAAAGAGGATAGTTCAATTGAGACAAACTTGGCTTCAAGATCTGTACGTGAACCGAGAGTAGTTGTCCAAATTGAAACTGAAGTTGACATACTTGAAGATGGGTATCGGTGGCGGAAATATGGTCAAAAAGTTGTCAAAGGAAATCCAAATCCAAGGAGCTACTACAAATGCACGAGTGCAGGCTGCTTAGTAAGGAAACATGTTGAGAGAGCATCACATGATCTGAAATGTGTCATTACAACATACGAAGGGAAACACAATCATGAAGTGCCAGCAGCAAGAAATAGCAGTCAAGTAAACTCGGGTAATGGCAATGCCCAACCGCCTGCTTCTCATGTGCAACCAAACATGGGTTTGTCCAGAAACTCAAACGTCCCAAAGTCCGAAACAGAAATTCAAGATCTTGCCACCCATTTTTATCCAAAACCAGAATTTAACCATGACTATCAAAGGTCTGGTTTTGACACTTTTACAAACGATATGAAACTTGGAGCTCCTCCATTCTGTCAAATGAAGTTCCCTCCACTCCGGAACACCTTGCCATACAGTACCTTTGGATTAAGTTCAAAGCATACTGCAACAGGTATCTCTGGGTCTTTGGCATCTGTGGTCTCGGACTTTCCGATTTCTTTGCCATTGAACCAAAAACTTTCGGCTGCTGGTTACGATTATACCAATGGAAGACCAATACTACCATTTCAGGTTTTTTTGGCTGGTCAGCAGCTGAGGGAGACGGATAGATTCCTCACACCCAAACAGGAGCACGACGATGATAACATCTGTGCTTCATTCCAACCATTACTGATGACCATTGCAGAACAGACAATTCAGGTGATGAAGAATGCCCATAGGAGATCATATCACTTCTCAGTTGGCTATTTTGCTCAATGCTGCCTTCCACATCAGAGCCTCCGTCGGAGTGGTTTTGCGTTGCTTTGCTTATATGTTTGTGAGAGAGGGATTTCCAAATATTACAACAAAAGAAAGCCCTTGTTCCCACGGCTGCCACCCGGTCCAAAGCCATGGCCTATCCTTCGCAGCTGCCTACCATTAATGTTGTCAAGGAACAAACGCTCACCAACACACCAATGGATTCGTACAGTAATGAAGCAGTTGAACACTGAAATTGCCTGCATCCATCTCGGATCAAATACTCACATAATTATTGTGACTTCTCCAGAACTCGCTCTTGAATTTCTAAAGACACATGATTCAGTCTTTGCATCACGACCCATTGCCAGCACCGCTGAGATATTGAGTTGCGGATTTCTTAGTACAGTTCTTTCACCAACGGGGGATCAATGGAAGAAGATGAAAAGAATCCTTGCTTCTCATGTTCTCAATCCATCGACCCTCCATCAAATGTGTGGCCAAAGGATGAAGGAAGCTGACGCTCTTCTATGTTACATCTTCGACCACACCAGTAGATGTGAAGCGATCAACATAAGAAGCATTACACAACATTATTGTACCAACATTATTAGAAGAATGATATTCAATAGAAGATACTATAGAGAAGGGAGGGAAAATGAGGGTCCATCTTTTGAAGAAGAAGACTATAATCAAGCATTGCTTACAATTTTAATGCATCTTTATTCGTTTTCTATATCAGAATTTATTGCTTGTTTGAAGCCTTTTGATCTAGGTGGACATCAAAAGATGATAAAGAGGGCTTTGAAAGTCATATCAAACCATGACGGACCAATTATAGAGGAAAGAGTGCAAGAATGGAGAGATGGAAAGAAAAAGGAGGTGGAGGACATTCTTGATATTCTTATCACACTTAAAAAAGAGAATGGTGAATCGTTGTTGTCAATTGAAGAGATTAAGGCTCAAATCACGGAGCTGCAACTCGCAACGATAGATAATCCGTCAAACGCAGTAGAGTGGGCAATGATAGAGTTACTTAATCAACCAAAAATTCTCCAAAAAGCTGTTGAAGAATTAGACAAAGTAGTTGGAAGAGATAGGTTGGTCCAAGAATTTGACATCCCTAATCTCAAGTATCTCACAGCTTGTATAAGAGAATCTTTTCGACTTCATCCATTTTCCCCCTTCAACCTTCCTCATGTTTCCAACTCGGACATTGTTGTGGGTGGATACTTCATCCCAAAAGGTAGCCAAATTTTGCTATGTCGTGTGGGGCTTGGCCGAAATCCAAGGATTTGGGAGGATCCAATGAGATTTGACCCAGAACGACATCTAAGAGATGAGACAGTTAAATTTGGGCTATCAGAACCTAGTCTTCGATTCATCACCTTCACTAGAGGAAGGAGGGGTTGCATTGGCAGCTCACTTGGCACTAACATTACCATGATGTTATTTGCTAGACTTCTACAAGGATTTTCATGGAGTTTATTGCCAGGTATCACAAAGATAGATTTCTCCGAAACTGATGAGCTCTTTCTTTCAAACCCATTGCATCTATGTGCAAAACCACGTTTATCTCCTATTATGTATCAAACAACTAATTGCTCATGA 3768 41.88 MDHFGHLTDDGVLVDANAGSFAQSRPSKRRRNGWIPTKDSHSPILSSPSLTIPPGINPTLLLDSPVMLLNTQDLPSPTTGTFPPIHQIKDEQSLLNPVMPEDGISHGSEDSYFRFPPQGELCTLQSLLRIENQEAEIDHQALESEKTLMDFEFVPDIPKEASVLKYEIAPSTDNSYFDGKIVNGNCENMESCLSSITTNQPRIHEESTQGDDIDTQHPLEDEQKGSYIPMGMLRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCLVKKKVERSLDGQITEIIYKGAHNHAKPDPNRRAMVGSVPISGDTPEIGEGGGNHSKLEAGLTWRNSQYGVKDIKPISNCSVDGLERIPSVSVLSELSDPLLNPQEKTVGVLEPVGTPELSSTLASHDDDNGGGGDDDLTTQGSISVCTEADDVEPELKRRRKEDSSIETNLASRSVREPRVVVQIETEVDILEDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCLVRKHVERASHDLKCVITTYEGKHNHEVPAARNSSQVNSGNGNAQPPASHVQPNMGLSRNSNVPKSETEIQDLATHFYPKPEFNHDYQRSGFDTFTNDMKLGAPPFCQMKFPPLRNTLPYSTFGLSSKHTATGISGSLASVVSDFPISLPLNQKLSAAGYDYTNGRPILPFQVFLAGQQLRETDRFLTPKQEHDDDNICASFQPLLMTIAEQTIQVMKNAHRRSYHFSVGYFAQCCLPHQSLRRSGFALLCLYVCERGISKYYNKRKPLFPRLPPGPKPWPILRSCLPLMLSRNKRSPTHQWIRTVMKQLNTEIACIHLGSNTHIIIVTSPELALEFLKTHDSVFASRPIASTAEILSCGFLSTVLSPTGDQWKKMKRILASHVLNPSTLHQMCGQRMKEADALLCYIFDHTSRCEAINIRSITQHYCTNIIRRMIFNRRYYREGRENEGPSFEEEDYNQALLTILMHLYSFSISEFIACLKPFDLGGHQKMIKRALKVISNHDGPIIEERVQEWRDGKKKEVEDILDILITLKKENGESLLSIEEIKAQITELQLATIDNPSNAVEWAMIELLNQPKILQKAVEELDKVVGRDRLVQEFDIPNLKYLTACIRESFRLHPFSPFNLPHVSNSDIVVGGYFIPKGSQILLCRVGLGRNPRIWEDPMRFDPERHLRDETVKFGLSEPSLRFITFTRGRRGCIGSSLGTNITMMLFARLLQGFSWSLLPGITKIDFSETDELFLSNPLHLCAKPRLSPIMYQTTNCS* 1256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16368321 16401327 + Chy2G039390.1 Chy02g01672 221120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01672 1255 Pfam WRKY DNA -binding domain 237 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy02g01672 1255 Pfam WRKY DNA -binding domain 461 518 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy02g01672 1255 MobiDBLite consensus disorder prediction 205 221 - -
Chy02g01672 1255 MobiDBLite consensus disorder prediction 18 50 - -
Chy02g01672 1255 SUPERFAMILY WRKY DNA-binding domain 453 520 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy02g01672 1255 Gene3D WRKY domain 231 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy02g01672 1255 MobiDBLite consensus disorder prediction 385 443 - -
Chy02g01672 1255 MobiDBLite consensus disorder prediction 419 436 - -
Chy02g01672 1255 ProSiteProfiles WRKY domain profile. 231 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy02g01672 1255 SUPERFAMILY Cytochrome P450 762 1243 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g01672 1255 SUPERFAMILY WRKY DNA-binding domain 234 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy02g01672 1255 MobiDBLite consensus disorder prediction 200 222 - -
Chy02g01672 1255 Gene3D Cytochrome P450 750 1242 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g01672 1255 MobiDBLite consensus disorder prediction 519 554 - -
Chy02g01672 1255 Pfam Cytochrome P450 765 1235 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g01672 1255 SMART WRKY_cls 460 519 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy02g01672 1255 SMART WRKY_cls 236 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy02g01672 1255 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 36 675 IPR044810 GO:0003700
Chy02g01672 1255 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 36 675 - -
Chy02g01672 1255 Gene3D WRKY domain 447 513 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy02g01672 1255 ProSiteProfiles WRKY domain profile. 455 520 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy02g01672 1255 Coils Coil 125 145 - -
Chy02g01672 1255 MobiDBLite consensus disorder prediction 520 554 - -
Chy02g01672 1255 PRINTS E-class P450 group I signature 918 936 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g01672 1255 PRINTS E-class P450 group I signature 1190 1213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g01672 1255 PRINTS E-class P450 group I signature 1100 1118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g01672 1255 PRINTS E-class P450 group I signature 1141 1165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g01672 1255 PRINTS E-class P450 group I signature 1057 1083 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g01672 1255 PRINTS E-class P450 group I signature 799 818 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g01672 1255 PRINTS E-class P450 group I signature 1180 1190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00511 Chy-Chr1:3690925 Chy02g01672 Chy-Chr2:16368321 3.76E-64 dispersed
Chy02g01672 Chy-Chr2:16368321 Chy10g00292 Chy-Chr10:7338207 0 dispersed
Chy09g00217 Chy-Chr9:1819693 Chy02g01672 Chy-Chr2:16368321 2.37E-14 dispersed
Chy11g01398 Chy-Chr11:20393355 Chy02g01672 Chy-Chr2:16368321 8.92E-15 dispersed
Chy02g01672 Chy-Chr2:16368321 Chy06g01876 Chy-Chr6:22629322 6.89E-90 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17551 PF00067 p450 1.10E-79 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01672 K18835 - csv:101206605 1243.8