Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01674 ATGAAGCTCCAAGTCGCCCACGACGATCTCAACGCCCTTCTTCTTCCTCCCCCTAACTTCTCCATGGTTGAAGACGGCATTTTCCGGTCCGGCTTCCCTCAGCCCTCCAATTTCTCCTTCCTCCGCAGCCTCAACCTCCGCTCCATCATATATTTGTGTCCTGAGCCCTACCCTGAGGAGAATTTGGAGTTTCTTAAAGCTAATAATATCAAGCTTTTTCAATTCAAAATTGAAGGAAAAAAGGAGCCTTTCGTTTCAATTCCTAAGGATGCTATTCTTGAAGCACTAAAAATCCTAATTGATGTTAGGAATCATCCCATCTTGATCCACTGCAAGCGTGGAAAGCATCGCACAGGCTCGCTCATTGGTTGCCTGAGGAAGTTTCAGAACTGGTGCTTGACATCGGTGTTCGAGGAGTACCAGCGATTTGCAGGGGTAAAATCGAGGGCGACGGATCTACAATTCATCGAGACATTCGACGTTGGGTCTCTGAGGCAATGTGTTTACAGCATCATATATCAGTACCAAGGTTATAGCTCAAACAAGAGGAGGCTGTTGTATAGAGAAGAAAACTTGCAAAAGCCTCAAACAACAAAAGTTTAG 603 45.44 MKLQVAHDDLNALLLPPPNFSMVEDGIFRSGFPQPSNFSFLRSLNLRSIIYLCPEPYPEENLEFLKANNIKLFQFKIEGKKEPFVSIPKDAILEALKILIDVRNHPILIHCKRGKHRTGSLIGCLRKFQNWCLTSVFEEYQRFAGVKSRATDLQFIETFDVGSLRQCVYSIIYQYQGYSSNKRRLLYREENLQKPQTTKV* 201
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16473349 16474792 - Chy2G039410.1 Chy02g01674 221122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01674 200 PRINTS Plant and fungal dual specificity phosphatase signature 87 101 IPR020428 GO:0016791
Chy02g01674 200 PRINTS Plant and fungal dual specificity phosphatase signature 14 31 IPR020428 GO:0016791
Chy02g01674 200 PRINTS Plant and fungal dual specificity phosphatase signature 70 84 IPR020428 GO:0016791
Chy02g01674 200 PRINTS Plant and fungal dual specificity phosphatase signature 51 64 IPR020428 GO:0016791
Chy02g01674 200 CDD PFA-DSP_Siw14 13 160 - -
Chy02g01674 200 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 11 183 - -
Chy02g01674 200 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 159 IPR029021 -
Chy02g01674 200 ProSiteProfiles Dual specificity protein phosphatase domain profile. 19 173 IPR020422 GO:0006470|GO:0008138
Chy02g01674 200 Gene3D Protein tyrosine phosphatase superfamily 13 163 IPR029021 -
Chy02g01674 200 Pfam Tyrosine phosphatase family 14 162 IPR004861 -
Chy02g01674 200 ProSitePatterns Tyrosine specific protein phosphatases active site. 109 119 IPR016130 GO:0016311|GO:0016791
Chy02g01674 200 PANTHER TYROSINE-PROTEIN PHOSPHATASE 11 183 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01674 Chy-Chr2:16473349 Chy11g00950 Chy-Chr11:13243491 1.16E-79 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01674 K18045 - csv:101211082 384.415