Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01759 ATGGCTGCCTCTAACACCAATGTCTCCGGCGACGACGACGATCGGGTCTTGGCTACCGCTCAACAGATCGTTAAGAGCCTCAATACCCCTAAAGAAGTTCGTGAGGATATGCTCTTCATTCTCTCCACTTTCGATAATCGTCTTTCCAGTATCGGTACTATGATCAACAATGATGACTCCAACATTAAGACCTCTAGGTTAGACGCCGCCGAAAAGGTGATTCTACGTTGGGACCCTAATTCCGATCAGTCCAGACGGTCCTTTAATTGGGAAGATTCGCCGGACGAGGCGGCTGAATATTTATCGGCGGTGGATGATATACTACAGTTACTAGAAGAGCTTTCAATTGGTTCTGAATCAACCGACATCGTAGATCGAGCAGAAAATTTGATCCAAATGGCAATGTGCCAGCTCGAGAGCGAATTTCGTCATATCCTAATTCAGAGCACGATCCCTCTCGACGCCGAGCGACTTTATTGTTCGATCCGAAGAGTTCATCTCTCATTTGCGTCTCATTACAGTGAAATTGATGACGAATTGGAGAGTTTTGGCGAGGAAAGTCGTAGTTCTGGGCGATTTCATGAGCGAGGTGCGACAATTGGGGAAGATTCTTGGGTTGATTTGATCCATCCTAATGCGGCTGTTGATCTTTCGGAGATTGCGGATCGTATGATTCGCTCTGGCTACGAAAAGGAGTGTGTTCAAGTCTATAGCATTGTTCGTCGTGATGCTTTAGATGAGTGCTTGATGATTCTTGGCGTCGAACGCCTTAGCATTGAGGAGGTTCAAAAAAGTGATGGGAAATTCTTAGATGAGAAGATGAAGAAATGGATTAAGGCTGTCAAGATTACAGTTCGGTTGATTTTGGAAGGTGAGAAGAGGCTGTATGATCAGATTTTCACTGGCGCCAATGAATCCAAGGAGGTTTGTTTTAATGAAACAGCAAAAGGGTGTGTAATGCAGTTGTTGAATTTTGGTGAGGCAGTGGCTATCGGGAAGAGGTCACCGGAGAAGTTGTTCCGAATCTTAGATATGTACGACGCTTTGGCTGGTGTTTTGCCCGACTTGGAAGCCATGGTTTCTGATGAGTTTTTGATCAGTGAAGCACATGGTGTATTGTGTGGACTGGGTGAAGCAGCCATAGGGACATTTGTTGAGTTTGAGAATGCCATTGAAAGCGAAAATTCGAAGAAAGCAATGCAAAACGCCGAGATTCACCCACTTGTTCGATATGTAATGAATTACGTTAGATTGTTGGTTGATTACAGTAAGACAATGAACTCACTTTTAGAAGATGAGGAAGTAGAAGACTTGCCAAACAAGAGGGATAAGGTCGATAATCTGCAATTGGAAAGTACGTCGTCGCCTTTAGCTCGGAGATTATTAATGCTATTATCGTCTTTGGAATCAAATCTTATGGAAAAAGCCAAACTCTATGAGGATGTTGCAATGCAGTTCATATTTCTCATGAACAATATACTGTACATAGTGAAAAAAGTGAAAGATTCTGAGCTTGCCCAACTGCTTGGCGATAACTGGCTTCGCAGGCATAGCGGCCAAATTCGCCAATACGAAACGAGTTACCTTAGAGCTTCTTGGAGCAAAGTTTTGTCTTTCTTAAAAGATGAAGGTATTGGTGGCAGCACAAGCAATGCCTCCAAGGTAGCATTGAAGGAAAAGTTCAAGAATTTCAATGCAAGTTTTGAGGAAATCTGTAGGGTTCAAACAGCTTGGAAGGTATCAGATGCTCAACTGCGCGATGAGCTGATAATATCCGTTTCGGAGAAGGTGATTCCAGCATATCGCTCCTTCTTAGGAAGGTTTAGAAATCAATTAGAGAGCGGAAGGCATTCGGGGAAGTACATAAAGTACACGCCAGATGATTTAGAGAACTCTCTATCAGATTTGTTTGAAGGATCACCTGTTGTATCACATCATTTGAGAAGAAAGGGTACTTGA 1959 43.29 MAASNTNVSGDDDDRVLATAQQIVKSLNTPKEVREDMLFILSTFDNRLSSIGTMINNDDSNIKTSRLDAAEKVILRWDPNSDQSRRSFNWEDSPDEAAEYLSAVDDILQLLEELSIGSESTDIVDRAENLIQMAMCQLESEFRHILIQSTIPLDAERLYCSIRRVHLSFASHYSEIDDELESFGEESRSSGRFHERGATIGEDSWVDLIHPNAAVDLSEIADRMIRSGYEKECVQVYSIVRRDALDECLMILGVERLSIEEVQKSDGKFLDEKMKKWIKAVKITVRLILEGEKRLYDQIFTGANESKEVCFNETAKGCVMQLLNFGEAVAIGKRSPEKLFRILDMYDALAGVLPDLEAMVSDEFLISEAHGVLCGLGEAAIGTFVEFENAIESENSKKAMQNAEIHPLVRYVMNYVRLLVDYSKTMNSLLEDEEVEDLPNKRDKVDNLQLESTSSPLARRLLMLLSSLESNLMEKAKLYEDVAMQFIFLMNNILYIVKKVKDSELAQLLGDNWLRRHSGQIRQYETSYLRASWSKVLSFLKDEGIGGSTSNASKVALKEKFKNFNASFEEICRVQTAWKVSDAQLRDELIISVSEKVIPAYRSFLGRFRNQLESGRHSGKYIKYTPDDLENSLSDLFEGSPVVSHHLRRKGT* 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18785089 18787047 - Chy2G040260.1 Chy02g01759 221207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01759 652 Pfam Exo70 exocyst complex subunit 275 635 IPR046364 GO:0000145|GO:0005546|GO:0006887
Chy02g01759 652 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 54 651 - -
Chy02g01759 652 Gene3D Exocyst complex component Exo70 73 646 - -
Chy02g01759 652 SUPERFAMILY Cullin repeat-like 69 638 IPR016159 -
Chy02g01759 652 PANTHER EXOCYST COMPLEX PROTEIN EXO70 54 651 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01759 Chy-Chr2:18785089 Chy12g01170 Chy-Chr12:16583153 0 dispersed
Chy12g00132 Chy-Chr12:1479268 Chy02g01759 Chy-Chr2:18785089 7.48E-92 dispersed
Chy02g01759 Chy-Chr2:18785089 Chy11g01268 Chy-Chr11:18902583 4.39E-102 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01759 K07195 - csv:101205970 1229.16