Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy02g01804 | ATGGAAAATTCCTCCAAATCACCCGATGATCGGAAAACCCGCTTCTATCATCCTTACCAAGACCTACACGTTCCGATCACCAAGCTCTACGAGCTCCCCACCGCCCCCGAGCATCTTTTCTTCGAAGAAGCCGCCAGGCCTCACCGTTCTTGGGGCGAAAACCTCCAATACTACACCGGAATTGGCTACCTCTCCGGCGCCCTTCTTGGCGGCGCCAGGGGTTCCATTCAGGGCCTCAGGGCAGCTGAGCCCGGTGACTCTGTCAAACTCCGTCTCAATCGAGTTCTCAACTCTGGGGGCCAGCTTGGCCGGAGGGCTGGAAACTCCCTTGGGATCCTTGGCTTGATTTTTGCTGGTTTGGAAAGTGGGGTTATTCATTTGAGAGGTTCTGATGATGTTTTAAACAGTATTGTAGCTGGATTGGGGACTGGTGCTGTTTATAAGGCGGCGTCTGGGCCAAGGTCGGCTGCCATCGCGGGTGCTATTGGAGGAATTGCTGCTGCAGCTGCAGTTGCGGTTATTGATGCCCTGGATATGGGAGACTTTAAATTGGTGTTTGATTAA | 564 | 53.37 | MENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTGIGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLESGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAVIDALDMGDFKLVFD* | 188 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 19951043 | 19951848 | - | Chy2G040710.1 | Chy02g01804 | 221252 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy02g01804 | 187 | PANTHER | MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-3 | 1 | 175 | - | - | |
| Chy02g01804 | 187 | PANTHER | TIM23 | 1 | 175 | IPR045238 | GO:0022857 | |
| Chy02g01804 | 187 | Pfam | Tim17/Tim22/Tim23/Pmp24 family | 57 | 165 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy02g01804 | Chy-Chr2:19951043 | Chy01g02191 | Chy-Chr1:26465737 | 5.06E-52 | dispersed | |
| Chy12g00333 | Chy-Chr12:3563666 | Chy02g01804 | Chy-Chr2:19951043 | 4.39E-08 | transposed | |
| Chy02g01804 | Chy-Chr2:19951043 | Chy05g01400 | Chy-Chr5:18048022 | 8.61E-06 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy02g01804 | K17794 | - | csv:116401801 | 296.589 |