Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01841 ATGATACAATCTTCTTCTCCTCAATCATGTGTGACAAGTTTTAGTAGTAATATGTTGGATTTTTCGAATAATAACAATAACAACAAATCTCTTGCTGATCATTCTCGTCCTAGAAATCCTCCTCAAGTACTAGATCGCTCCTCTGAGTGCAATAGCAATGTAAATGGTGGGGCAGTAAAGAAGGCAAGAGTTCAATCCTCTTCAAACCAAACAACTTTCAAGGTAAGAAAGGAAAAATTGGGTGACAGAATTACAGCTCTCCACCAGCTAGTTTCCCCATTTGGAAAGACTGACACAGCTTCAGTTTTGTTAGAAGCTATTGGGTACATCAGATTCCTTCAGAGTCAAATTGAGGCCCTGAGCTTACCCTACTTGGGCAATACTTTGGGAAGTACGAGGCAACATCAACACCAACAACATTCTGTTCAAGGAGAAAGAAACTGCGTTTTTCCTGAGGACCCTGGCCAGCTCTTGAACGAGAATTGCTTGAAGAGGAAAGGAGTCTCTGAGCAGGAGGAGGAGGGAAAGAAGGATTTGAGGAGTAGAGGGTTATGTTTGGTTCCGGTATCCTGCACCCTACAAGTTGGGAGTGACAATGGAGCTGATTATTGGGCTCCGGCGTTCGGTGGCGTTTGCTACCTTCTGATTAGCAGCCGCAGCCAAGCTTCATCGAGAAGAAGGTATGGAAGAGGGGGAAAAAGTGGAATTAATCTGATCGTGAGGAATGATATATTGGTGAAAGCGTTGAAAGAGATCGAGAAGAAATTAGGGAAAAAGGACTGGGATTTTAACATAGATCCTTGCAGTGGAGAAAGAAAATGGCGCGTTGTTAATGGAAGAAAAGGGTTCGAAAGCTCTGTCACCTGTGATTGCTCTTTCAACCATAACTCCATGTGCCATATCGACGTCATATTACTATCGATGATGCTCCTAACGAGACTTGGCATATGGTCTTCAGTACTGAAGGCCAGAAAGCTCACCGCGAACCTCTGGCAGCTTCATTACAAGGAAATTTCAGGCGGCGGTAGGAGAGAGTCTCAGGGAGAAATAAGAGATGGGCGTGATGAGAGGCGTCATTGTATTGATTCCTGGAATAAAGGAATGAAGGTGAAG 1113 44.03 MIQSSSPQSCVTSFSSNMLDFSNNNNNNKSLADHSRPRNPPQVLDRSSECNSNVNGGAVKKARVQSSSNQTTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGNTLGSTRQHQHQQHSVQGERNCVFPEDPGQLLNENCLKRKGVSEQEEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGVCYLLISSRSQASSRRRYGRGGKSGINLIVRNDILVKALKEIEKKLGKKDWDFNIDPCSGERKWRVVNGRKGFESSVTCDCSFNHNSMCHIDVILLSMMLLTRLGIWSSVLKARKLTANLWQLHYKEISGGGRRESQGEIRDGRDERRHCIDSWNKGMKVK 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20697189 20716049 + Chy2G041080.1 Chy02g01841 221289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01841 371 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 64 113 IPR011598 GO:0046983
Chy02g01841 371 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 74 124 IPR036638 GO:0046983
Chy02g01841 371 PANTHER OS05G0228400 PROTEIN 4 200 - -
Chy02g01841 371 CDD bHLH_AtbHLH_like 72 121 IPR045239 -
Chy02g01841 371 MobiDBLite consensus disorder prediction 22 52 - -
Chy02g01841 371 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 4 200 - -
Chy02g01841 371 Gene3D - 63 129 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01841 Chy-Chr2:20697189 Chy04g00926 Chy-Chr4:13281285 6.20E-59 dispersed
Chy12g01004 Chy-Chr12:15260343 Chy02g01841 Chy-Chr2:20697189 1.63E-26 dispersed
Chy02g01841 Chy-Chr2:20697189 Chy02g00358 Chy-Chr2:2306620 6.08E-35 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01841 - - csv:101207910 396.356