Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01856 ATGGACACAACCGATTCAATCACTGCTTTCTCTCATCTTCTTCAACCTCCGGATTTCTCTCACTATGTTGAAATTGATCCCACTGGCAGATATGGAAGATATAATGAAATCCTCGGCAAAGGAGCTTCCAAGACAGTTTACAGAGCATTTGATGAGTATGAAGGGATTGAAGTTGCTTGGAATCAGGTCAAACTCTGTAACTTCCTTCAATGTCCTGAAGATCTTGAGAGGCTATACTCTGAGATTCATCTCTTAAAAACATTGAAACATAAGAACATTATGAAATTCTATACCTCTTGGGTCGATACTGCAAATAAGAACATCAACTTTTTAACTGAAATGTTCACTTCGGGGACTTTGAGGCAGTATAGGCTAAAGCATAGGAGAGCTAACATTAGGGCAGTGAAGCGATGGTGTAGACAAATTTTGAGGGGTCTTCACTATCTCCATAGCCAAGACCCCCCTGTGATCCACAGAGATCTCAAGTGTGACAACATTTTTGTTAATGGTAACCAGGGAGAAATTAAAATTGGAGACCTTGGTCTTGCTGCTATCCTCCGGAAATCACATGCTGATCATTGTGTTGGGACACCAGAGTTCATGGCTCCTGAAGTATATGAAGAGGCATATAATGAATTGGTAGACATTTATTCTTTTGGGATGTGTGTTTTGGAGATGGTTACGTTTGAATATCCATATAGTGAATGTAATCATCCTGTTCAAATCTATAAGAAAGTAATTTCTGGTAAAAAACCAGCTGCCTTGTATAAAGTGAAGGATCCAAGCATGCGACAATTCGTTGAGAAATGCTTGGCACCAGTCTCTTGTAGACTTTCAGCAAGGGAGCTTTTGAGTGACCCTTTTCTCGAAATTGATGGTTGTGAAAGCAAGTTGAAAATTTCAGATTCTCGGAGAGAACTGGACGGTTTTTCTTCCACTATAGTACGCCCTTTCCTTGAACGAGAAAGAAGATTTAGCTCAATTAGTTACAGTTTGGAGGCCTCAGATGAATGGAGGTACCGTTCGGTCCAGAAGGAACTTGATGGGATTGAACTTTTTGAGGACAATGATAATGACCAATTGGAAAATCTTGATAACAATATTAAGGGGAAAATACGTGAAGATGGCAGCATTGTTTTAAGGCTTAGGATTACGGATAAAGAAGGGCTTATTCGGAACATATATTTCCCATTTGACACCAAGAATGATACAGCATTCACAGTAGCCACCGAAATGATAGCGGAGCTTGATATTACTGACCAAGATGTGATCAAGATAGCTGAAAAAATTGATGGGGAAATTTCTTCCTTGGTTCCCGAGTGGAAGCCAGGGCCTGGCATAGATGAAACACCTCGCATCTCTTACGATGGTGGCTCTCAAAGCTACAACGCTGGCAATCAACCATCTGATAATATTTTGATAGAGAATAAAGGAAATGGAATCAAACTCTATCAGATTTTAAACTTAAGCACAGATGGGCATGCTTTGGCACACGAACATTTCGAGCAAGAGCAGTTCTCGCTCAAAGCAGATCGGCCTACACAACCTGTGGTAGGGAGCATACCAAATGTGTCAAGGCAGCACTATCAGCCAGATTCTGTCCTCAACGAAAACCAAGCTCTTAGTTCTCATAGTTTTAGGCAAAGACATTTTGATGATAATTACAAGAAAACTGACCAATCACTCACTGTTGGGTATAACAAAGAAAAACTACCAGTTAACAAAGCCACTGTCATTGACACTTCACAAAGAAGCTTATTGGGTTCCCGATCACTGTCCGCAGTTTCATCCTATTGCGAAGATAAATTTTCCTCTCAAATTCATTGGGAAATTAGATGGCTGTGGAATTGA 1851 40.36 MDTTDSITAFSHLLQPPDFSHYVEIDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLCNFLQCPEDLERLYSEIHLLKTLKHKNIMKFYTSWVDTANKNINFLTEMFTSGTLRQYRLKHRRANIRAVKRWCRQILRGLHYLHSQDPPVIHRDLKCDNIFVNGNQGEIKIGDLGLAAILRKSHADHCVGTPEFMAPEVYEEAYNELVDIYSFGMCVLEMVTFEYPYSECNHPVQIYKKVISGKKPAALYKVKDPSMRQFVEKCLAPVSCRLSARELLSDPFLEIDGCESKLKISDSRRELDGFSSTIVRPFLERERRFSSISYSLEASDEWRYRSVQKELDGIELFEDNDNDQLENLDNNIKGKIREDGSIVLRLRITDKEGLIRNIYFPFDTKNDTAFTVATEMIAELDITDQDVIKIAEKIDGEISSLVPEWKPGPGIDETPRISYDGGSQSYNAGNQPSDNILIENKGNGIKLYQILNLSTDGHALAHEHFEQEQFSLKADRPTQPVVGSIPNVSRQHYQPDSVLNENQALSSHSFRQRHFDDNYKKTDQSLTVGYNKEKLPVNKATVIDTSQRSLLGSRSLSAVSSYCEDKFSSQIHWEIRWLWN* 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20910043 20912801 - Chy2G041230.1 Chy02g01856 221304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01856 616 Gene3D Phosphorylase Kinase; domain 1 18 113 - -
Chy02g01856 616 SUPERFAMILY Protein kinase-like (PK-like) 25 289 IPR011009 -
Chy02g01856 616 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 14 616 - -
Chy02g01856 616 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 378 432 IPR024678 GO:0004674|GO:0005524
Chy02g01856 616 ProSiteProfiles Protein kinase domain profile. 32 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01856 616 Gene3D Transferase(Phosphotransferase) domain 1 115 294 - -
Chy02g01856 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Chy02g01856 616 CDD STKc_WNK 30 289 - -
Chy02g01856 616 Pfam Protein kinase domain 35 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01856 616 SMART serkin_6 32 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01856 616 Gene3D - 376 442 - -
Chy02g01856 616 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 14 616 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01856 Chy-Chr2:20910043 Chy05g01179 Chy-Chr5:16269268 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71080 PF00069 Pkinase 8.60E-49 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01856 K08867 - csv:101222641 1195.65