Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01869 ATGTCGTCTCCGTCTCCAACCTCGCCGCCGGCGACTAACACCACCTCACCCCCAACTCCCACCACGAGCGCACCACCTTCGGCAACCCCATCTCTCTCACCGCCTCCTCCCGACTCTGCTTCTCAGCCTCCTCCTGCTTCTTCATCCCCGCCACCTTCCACTACTCCTTCCCCGCCACCTCCGGATAGTTCCACTCCATCTCCGCCTACTTCTTCTCCTTCACCGCCAACCTCGCCTTCGACCTCTTCGCCTCCACCTCCGTCGACAAACTCGACTACTCCCACGCAGCTGCCTAGTCCGACGCCGCCTTCGGGTTCTGGTACACCTGCGAGTCCCGGAGATGATCTTCCCGGAAGAGATCTGCCTCCGCTGTCTTCCTCACCGTCGTCGGGAGTTTCGGCTGGACTTGTGGCTGGAGTCGCCATTGCTGGAGTGGTGGTGGTTGTTGTGGTGTTGATTGTTATGTTTTTGTGTATGAGAAAGAAGAGAAGACGCGACGAAGAGGCTTACTACCGGCCGCCGCCGCCACCCCCGTTGTATAAAGATGGCCCATATGGTCAACAACAGCACCACTGGAAATCACATCCCCCGCCGCCGGCAGATCATATTGTTGGGGCAGTGCCGAAGCCATCTCCTCCACCAGCACCACGGCCACAGCTGTCACCTCCGATTATAAACAGCAGTGGAGGCTCTGGATCTAATTATTCAGGGTCTGAAAATTCGCTTGTTCCTATCCCATCTTCTATTCCCTTAGGCTTTTCACAAAGCAGCTTTACTTACGAAGAGTTAGCAATGGCGACAGATGGGTTTTCAGAAGCCAATCTCCTTGGACAAGGTGGGTTTGGTTATGTGCATAAAGGGGTTCTTCCAAATGGAAAGGAAGTGGCAGTGAAGCAACTTAAAGCTGGAAGTGGGCAGGGAGAACGTGAATTTCAAGCTGAAGTGGAAATAATCAGCCGTGTTCATCATAGACATCTTGTTTCCTTAGTTGGATATTGCATTACTGGCTCCAGAAGATTGCTGGTTTATGAATTTGTTCCTAACAACACGTTGGAGTTTCACTTGCATGGGAAAGGACGACCCACCATGGATTGGCCAACGAGATTGAAAATTGCTCTTGGATCTGCCAAGGGATTGGCTTACCTTCATGAGGATTGTAAGTATATTGTGTTTGTGATAAGATGTGTTCTGGCTTCTGGCAATCCTAAGATCATTCATCGTGACATCAAAGCAGCAAATATACTTTTGGATTTGAAATTTGAAGCAAAGGTTGCTGATTTTGGGCTTGCTAAGTTGTCTTCTGATGTTAATACCCATGTTTCAACCCGAGTCATGGGAACTTTTGGATACCTTGCTCCAGAATATGCTTCAAGTGGGAAACTCACTGAGAAATCAGATGTCTTCTCCTTTGGAGTGATGCTTTTGGAGATGATTACTGGACGTAGACCTGTAGATACGACTCAATCATTCATGGACGATGGATTGCTCGATTGGGCAAGGCCATTACTACTTCGGGCCACGGAAGATGGGCACTACGACAGTTTAGTAGATCCAAAGCTGAGAGATAACTACGACCACAATCAAATGGCTCGCATGGTTGCTTGTGCAGCTGCCTGTGTGCGCCATTCTGCGAGGCGCCGACCACGGATGAGTCAGGTGGTTCATGCTCTTGAAGGTGAATCCTCACTTTCTGATCTTAACGAAGGGATTCGGCCTGGACATAGCACTGTCTACAGTTCTTATGGAAGCTCTGACTACGACACAGCTCAGTACAATGAGGACCTGAAAAAGTTCAGGAAGATGGCGTTGGCAAGTCAGGAGTATGGCAGTGAGTACAGTGAGCAGATGAGCGAGTATGGTTTGTATCCATCTGGGTCGAGTGGCGATGGCCAAACAACCAGGGAAATGGAGATGAGAACGACGGGGATGAAAGAAAGTGGAGGTTTTAGTGGAAGTTCATGA 1962 50.0 MSSPSPTSPPATNTTSPPTPTTSAPPSATPSLSPPPPDSASQPPPASSSPPPSTTPSPPPPDSSTPSPPTSSPSPPTSPSTSSPPPPSTNSTTPTQLPSPTPPSGSGTPASPGDDLPGRDLPPLSSSPSSGVSAGLVAGVAIAGVVVVVVVLIVMFLCMRKKRRRDEEAYYRPPPPPPLYKDGPYGQQQHHWKSHPPPPADHIVGAVPKPSPPPAPRPQLSPPIINSSGGSGSNYSGSENSLVPIPSSIPLGFSQSSFTYEELAMATDGFSEANLLGQGGFGYVHKGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGSRRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCKYIVFVIRCVLASGNPKIIHRDIKAANILLDLKFEAKVADFGLAKLSSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLEMITGRRPVDTTQSFMDDGLLDWARPLLLRATEDGHYDSLVDPKLRDNYDHNQMARMVACAAACVRHSARRRPRMSQVVHALEGESSLSDLNEGIRPGHSTVYSSYGSSDYDTAQYNEDLKKFRKMALASQEYGSEYSEQMSEYGLYPSGSSGDGQTTREMEMRTTGMKESGGFSGSS* 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 21220644 21223240 - Chy2G041360.1 Chy02g01869 221317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01869 653 MobiDBLite consensus disorder prediction 1 107 - -
Chy02g01869 653 Gene3D Transferase(Phosphotransferase) domain 1 346 569 - -
Chy02g01869 653 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 16 638 - -
Chy02g01869 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Chy02g01869 653 ProSiteProfiles Protein kinase domain profile. 270 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01869 653 MobiDBLite consensus disorder prediction 201 221 - -
Chy02g01869 653 MobiDBLite consensus disorder prediction 619 653 - -
Chy02g01869 653 MobiDBLite consensus disorder prediction 619 637 - -
Chy02g01869 653 Gene3D Phosphorylase Kinase; domain 1 247 345 - -
Chy02g01869 653 SMART serkin_6 270 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01869 653 MobiDBLite consensus disorder prediction 165 239 - -
Chy02g01869 653 Pfam Protein tyrosine and serine/threonine kinase 274 557 IPR001245 GO:0004672|GO:0006468
Chy02g01869 653 MobiDBLite consensus disorder prediction 222 239 - -
Chy02g01869 653 ProSitePatterns Protein kinases ATP-binding region signature. 276 298 IPR017441 GO:0005524
Chy02g01869 653 MobiDBLite consensus disorder prediction 1 132 - -
Chy02g01869 653 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 16 638 - -
Chy02g01869 653 SUPERFAMILY Protein kinase-like (PK-like) 244 557 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g01869 Chy05g01369 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01869 Chy-Chr2:21220644 Chy07g01290 Chy-Chr7:17560875 0 dispersed
Chy10g00690 Chy-Chr10:13291675 Chy02g01869 Chy-Chr2:21220644 3.95E-72 dispersed
Chy10g00750 Chy-Chr10:13700194 Chy02g01869 Chy-Chr2:21220644 3.92E-49 transposed
Chy02g01869 Chy-Chr2:21220644 Chy05g01369 Chy-Chr5:17799292 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71081 PF07714 PK_Tyr_Ser-Thr 5.10E-42 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01869 - - csv:101222748 884.019