Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy02g01885 | ATGGAGAACGATTCTACAATTTTAAACTCATCTCCGCCGCCATCGCCCTCATCATCTGGCAGTTTATCACCACCATCCTCCTCATCGCCCGTGGTCGAATCGAACCGGAAACGACTCAAACGGCCCAGGGACAATAACAACAACAACAATAACAGCAAACACCCGGTCTTCCGTGGGGTCCGAATGAGGGCATGGGGAAAATGGGTTTCCGAAATTCGTGAACCACGAAAAAAAAGCCGGATCTGGCTCGGTACTTTCTCCACCCCTGAAATGGCCGCACGTGCCCACGACGTCGCCGCCCTCACCATTAAAGGCACCTCCGCCATTCTCAACTTCCCTGAACTTGCCCACCAATTCCCCCGTCCGGCTTCCACTTCTCCTCGTGACGTTCAGGCCGCCGCCGCTAAAGCCGCCTTCATGGAAATCCCAACTCCCCCACTTTCTTCTTCTTCTTCTACTTCTACTTCTTCTTCCTCTTCTTCCTCTTCTTCTTCCTCTTTATGCCCTTCCTCGCCGGAGGAACTGACTGAAATCGTGGAGCTTCCGAGTTTAGGAACGAGTTATGAAACAGCGGAGTTAGGAAACGAGTTCGTATTTGTGGACTCGGTGGAAGGTTGGCTTTATTCTTACCCATGGTATAACAGAGTGAGTAATGCAGAGCAAGAAGAGGAATTACAAGAGGATTATGGATTATTCTTCAAAGACCAGATTTTAATGGCGGATTATACCGATACTTTCCTATGGCAAAATTAA | 753 | 49.27 | MENDSTILNSSPPPSPSSSGSLSPPSSSSPVVESNRKRLKRPRDNNNNNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFPRPASTSPRDVQAAAAKAAFMEIPTPPLSSSSSTSTSSSSSSSSSSSLCPSSPEELTEIVELPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYNRVSNAEQEEELQEDYGLFFKDQILMADYTDTFLWQN* | 251 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 21702613 | 21703365 | - | Chy2G041520.1 | Chy02g01885 | 221333 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy02g01885 | 250 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
Chy02g01885 | 250 | MobiDBLite | consensus disorder prediction | 144 | 170 | - | - | |
Chy02g01885 | 250 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Chy02g01885 | 250 | CDD | AP2 | 57 | 115 | IPR001471 | GO:0003700|GO:0006355 | |
Chy02g01885 | 250 | ProSiteProfiles | AP2/ERF domain profile. | 56 | 113 | IPR001471 | GO:0003700|GO:0006355 | |
Chy02g01885 | 250 | SUPERFAMILY | DNA-binding domain | 56 | 114 | IPR016177 | GO:0003677 | |
Chy02g01885 | 250 | PRINTS | Ethylene responsive element binding protein signature | 79 | 95 | IPR001471 | GO:0003700|GO:0006355 | |
Chy02g01885 | 250 | PRINTS | Ethylene responsive element binding protein signature | 57 | 68 | IPR001471 | GO:0003700|GO:0006355 | |
Chy02g01885 | 250 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE | 12 | 249 | - | - | |
Chy02g01885 | 250 | SMART | rav1_2 | 56 | 119 | IPR001471 | GO:0003700|GO:0006355 | |
Chy02g01885 | 250 | Gene3D | AP2/ERF domain | 56 | 114 | IPR036955 | GO:0003700|GO:0006355 | |
Chy02g01885 | 250 | MobiDBLite | consensus disorder prediction | 143 | 170 | - | - | |
Chy02g01885 | 250 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 12 | 249 | - | - | |
Chy02g01885 | 250 | Pfam | AP2 domain | 55 | 105 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g01885 | Chy-Chr2:21702613 | Chy04g00939 | Chy-Chr4:13509679 | 3.55E-50 | dispersed | |
Chy03g01248 | Chy-Chr3:15543641 | Chy02g01885 | Chy-Chr2:21702613 | 9.58E-54 | transposed | |
Chy04g00152 | Chy-Chr4:1356186 | Chy02g01885 | Chy-Chr2:21702613 | 1.41E-49 | transposed | |
Chy11g01758 | Chy-Chr11:23975040 | Chy02g01885 | Chy-Chr2:21702613 | 4.52E-40 | transposed | |
Chy02g01885 | Chy-Chr2:21702613 | Chy05g01389 | Chy-Chr5:17949100 | 1.55E-67 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17562 | PF00847 | AP2 | 2.90E-13 | CL0081 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy02g01885 | K09286 | - | csv:101219745 | 395.971 |