Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01885 ATGGAGAACGATTCTACAATTTTAAACTCATCTCCGCCGCCATCGCCCTCATCATCTGGCAGTTTATCACCACCATCCTCCTCATCGCCCGTGGTCGAATCGAACCGGAAACGACTCAAACGGCCCAGGGACAATAACAACAACAACAATAACAGCAAACACCCGGTCTTCCGTGGGGTCCGAATGAGGGCATGGGGAAAATGGGTTTCCGAAATTCGTGAACCACGAAAAAAAAGCCGGATCTGGCTCGGTACTTTCTCCACCCCTGAAATGGCCGCACGTGCCCACGACGTCGCCGCCCTCACCATTAAAGGCACCTCCGCCATTCTCAACTTCCCTGAACTTGCCCACCAATTCCCCCGTCCGGCTTCCACTTCTCCTCGTGACGTTCAGGCCGCCGCCGCTAAAGCCGCCTTCATGGAAATCCCAACTCCCCCACTTTCTTCTTCTTCTTCTACTTCTACTTCTTCTTCCTCTTCTTCCTCTTCTTCTTCCTCTTTATGCCCTTCCTCGCCGGAGGAACTGACTGAAATCGTGGAGCTTCCGAGTTTAGGAACGAGTTATGAAACAGCGGAGTTAGGAAACGAGTTCGTATTTGTGGACTCGGTGGAAGGTTGGCTTTATTCTTACCCATGGTATAACAGAGTGAGTAATGCAGAGCAAGAAGAGGAATTACAAGAGGATTATGGATTATTCTTCAAAGACCAGATTTTAATGGCGGATTATACCGATACTTTCCTATGGCAAAATTAA 753 49.27 MENDSTILNSSPPPSPSSSGSLSPPSSSSPVVESNRKRLKRPRDNNNNNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFPRPASTSPRDVQAAAAKAAFMEIPTPPLSSSSSTSTSSSSSSSSSSSLCPSSPEELTEIVELPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYNRVSNAEQEEELQEDYGLFFKDQILMADYTDTFLWQN* 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 21702613 21703365 - Chy2G041520.1 Chy02g01885 221333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01885 250 MobiDBLite consensus disorder prediction 1 57 - -
Chy02g01885 250 MobiDBLite consensus disorder prediction 144 170 - -
Chy02g01885 250 MobiDBLite consensus disorder prediction 1 33 - -
Chy02g01885 250 CDD AP2 57 115 IPR001471 GO:0003700|GO:0006355
Chy02g01885 250 ProSiteProfiles AP2/ERF domain profile. 56 113 IPR001471 GO:0003700|GO:0006355
Chy02g01885 250 SUPERFAMILY DNA-binding domain 56 114 IPR016177 GO:0003677
Chy02g01885 250 PRINTS Ethylene responsive element binding protein signature 79 95 IPR001471 GO:0003700|GO:0006355
Chy02g01885 250 PRINTS Ethylene responsive element binding protein signature 57 68 IPR001471 GO:0003700|GO:0006355
Chy02g01885 250 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 12 249 - -
Chy02g01885 250 SMART rav1_2 56 119 IPR001471 GO:0003700|GO:0006355
Chy02g01885 250 Gene3D AP2/ERF domain 56 114 IPR036955 GO:0003700|GO:0006355
Chy02g01885 250 MobiDBLite consensus disorder prediction 143 170 - -
Chy02g01885 250 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 249 - -
Chy02g01885 250 Pfam AP2 domain 55 105 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01885 Chy-Chr2:21702613 Chy04g00939 Chy-Chr4:13509679 3.55E-50 dispersed
Chy03g01248 Chy-Chr3:15543641 Chy02g01885 Chy-Chr2:21702613 9.58E-54 transposed
Chy04g00152 Chy-Chr4:1356186 Chy02g01885 Chy-Chr2:21702613 1.41E-49 transposed
Chy11g01758 Chy-Chr11:23975040 Chy02g01885 Chy-Chr2:21702613 4.52E-40 transposed
Chy02g01885 Chy-Chr2:21702613 Chy05g01389 Chy-Chr5:17949100 1.55E-67 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17562 PF00847 AP2 2.90E-13 CL0081 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01885 K09286 - csv:101219745 395.971