Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy02g01896 | ATGGGTTGCGTTTATTCGAGGGTTTGTATTGGCGAAGCTACAACTCCAAGATCTTCGAGAATTGCCGAAACCCAAAATGCCAAAACCGCCACTGAAATCGATACGATCTCTTCTTCGTCTTCCGATAGCCGAGAAGGTGAGACCGGCGACCGACTGAATCAATTGAATTCAAACAACAGAGATTCAGAAGCTGGAATCACGAGACTCTCGAGAGTTTCATCCCAGTTCTTGCCCGCCGAGGGGTCCCGAACCGTTAAAGTTCCTTCTGGAAACTTCGAACTGCGATATTCATTCCTTTCTCAAAGAGGGTATTATCCTGATGCCCTTGATAAGGCAAATCAAGACAGTTTTTGCATCCACACCCCATTTGGGAACAGCCCAGATGATCATTTCTTCGGGGTTTTCGATGGGCATGGGGAATACGGAGCACAGTGCTCGCAGTTTGTTAAACGGAAGCTCTGTGAAAATTTGCTTAGGAATAGTAGGTTCCACAGTGATGCAGTTGAGGCTTGTCATGCGGCCTATTTAACGACTAATTCACAGTTACACGCTGATATCTTGGATGATAGCATGAGTGGTACTACTGCTATTACTGTTTTAGTTAGAGGTAGGACTATATATGTTGCTAATTCAGGTGATTCGAGGGCAGTCATAGCAGAGCGGAGAGGAAAGGAAGTTGTGGCTGTTGACCTTTCGATTGACCAAACTCCATTTCGAACTGATGAACTCGAACGTGTTAAGCTTTGTGGTGCTAGAGTTCTTACACTTGATCAGATTGAGGGGCTGAAGAATCCTGATATTCAGCGCTGGGGTACTGAAGAAGGAGATGATGGTGATCCTCCTAGGCTTTGGGTGCCCAATGGGATGTACCCTGGCACTGCTTTTACAAGAAGTATTGGTGACTCAATTGCTGAGACTATTGGAGTCGTTGCTACACCTGAAATTGTTGTTCTGGAGCTGACACAGGATCATCCTTTCTTTGTTGTTGCTAGTGATGGGGTATTCGAGTTTCTTTCAAGCCAAACAGTGGTCGACATGGTTTGTAAATATAAAGATCCCCGTGATGCTTGTGCTGCAATTGTGGCTGAGTCTTACAGACTTTGGCTTCAATTTGAGACTCGAACGGATGATATCACTATTCTTGTGGTGCATATTAATGGGCTAACCAATACGGTTACTAGTGAATCGACAAGATCCGGTGGAGGAGGTTTTGTTCCATCTGCTATTCCTCAAGTCATGGAAGTGACAGGATCAGAGTCTCCCTCTACATTTGGCTGGAATAGAAACAATCGTGCAAGGCAAGATTTGTCAAGGGCGCGTCTCCGGGCCATCGAAAGTTCTCTAGAAAATGGTCAAGTCTGGGTACCTCCGTCTCCAGCTCACAGGAAGTCATGGGAAGAAGAAGCACATATTGAACGAGCATTGCACGATCATTTCCTCTTCAGAAAACTAACTGATTCTCAATGCCAAGTTTTATTGGATTGCATGCAAAGAGTTGAGGTCATCCCCGGGCAAATTGTAGTCGAACAAGGTGGCGAAGGTGACTGTTTTTACGTGGTTGGTAGTGGAGAATTTGAAGTCTTGGCAACCCAGGAAGAAAGCCATGGAGAGGTCCCTAGGGTTTTACAACACTACACAGCGGAGAAGCTCTCTTCCTTTGGCGAATTGGCTTTGATGTATAACAAACCACTTCAAGCCTCTGTACGTGCAGTGACAAGTGGGACACTTTGGGCTTTGAAAAGAGAGGACTTTCGTGGAATTCTTATATCAGAATTTTCTAACTTGTCATCTTTGAAATTGCTTCGATCTGTGGACCTCTTGTCGAAGTTAACAATCTTGCAATTGAGTCACATTGCAGACTGCCTTTCTGAAGTTCAATTCTCAGATGGGGAGCTGATTGTTGATGGGACTGAAGGCTCATGTGCACTGCACATTATTCAGAAGGGGCAAGTGAGGATTACTTTTGATGCAGAGTTAATGAGCAATTCAAATGTTTACAGCTTCAATTATGTAAGTCAAAAAGAGGATGGTGCTGCACAGAGTGGTAACGAGATTTCAGCTATTAGGAAAGAGGGAAGTTATTTTGGCGAGTGGGCACTTCTTGGTGAGCGTATCGGCTTCTTACGTGCAGTTGCTGTGGGAGATGTTGTGTGTGCTATTTTAACAAAGGAAAAGTTCGAATCAGTTGTTGGCCCCATACCAAAGCTCTCCCAAGATGATCAAAAGGCGAAAGAACACTCTTCAAACTCTCTCCATCAGTCTGCCAAAATTATTGATATTTCAGCTCTTTCTAAAGTTGGGCTCTCCGATCTGGAGTGGAAAATGTGTTTATATTCCACGGAATACAGTGAAATTGGGCTAGTTCGGTTAAGGAACACAGAAACTATGCTTAGTTTAAAAAGGTTTACAAGACAGAAGGTCAAAAGGCTGGGACTTGAAGCACAAGTTTTGAAGGAGAAAAATCTTATGAAGACCATTAGTTCTTCAGCTTGTGTTCCGGAACTTCTCTGCACTTGTTTTGATCAATCACATGCTGGCATATTGCTAAAGACATGCCTGGCTTGCCCTTTGTCTTCGATACTTCTCGTCCCACTAGATGAATCTTCTGCACGTTTCTTTGCAGCCTCTCTTATTATGGCACTGGAGGATTTGCACAAGCTTGGTGTTCTCCACAGAGGAATTTCCCCTGATGTTCTAATGTTGGATCAAACCGGACACATACAGTTGGTAGACTTCAGATTTGGGAAAAACACTTTGGGTGAGAGAACATATACTATTTGCGGGACGGCCGACTTTTTAGCACCTGAGATAGTTCAAGGCAATGGTCATGGCTTTGCTGCTGACTGGTGGGCACTGGGAGTTTTAATCCATTTCATGCTGAAATGTGAAATGCCATTTGGATCGTGGCGACAAAGCGAGCTTGATACTTTTTCGAAGATTGCAAAAGGTCAACTAAGTCTTCCCCAGATTTTCAGTCCTGAAGCAATCGATCTCATCACCAAGTTACTTGAAGTCGATGAGAAGAAAAGACTTGGAAACGAGAACCAAAACTCTGTTAGAAGTCATCCATGGTTTGATGGCGTTGATTGGAAGGGGATCCATGAGGGTACCTTTCCTGTTCCTGAAACAATAACTTCTCGTGTAGCTCAATATTTGGAGAGCTACTCTGAAAATTGCAGTGTTTCTTTAACTAAACCACCTCAAGATCTTGAAGAACAGGAAGTCCCTGAGTGGATCAACGACTGGTAG | 3249 | 44.01 | MGCVYSRVCIGEATTPRSSRIAETQNAKTATEIDTISSSSSDSREGETGDRLNQLNSNNRDSEAGITRLSRVSSQFLPAEGSRTVKVPSGNFELRYSFLSQRGYYPDALDKANQDSFCIHTPFGNSPDDHFFGVFDGHGEYGAQCSQFVKRKLCENLLRNSRFHSDAVEACHAAYLTTNSQLHADILDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAERRGKEVVAVDLSIDQTPFRTDELERVKLCGARVLTLDQIEGLKNPDIQRWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVATPEIVVLELTQDHPFFVVASDGVFEFLSSQTVVDMVCKYKDPRDACAAIVAESYRLWLQFETRTDDITILVVHINGLTNTVTSESTRSGGGGFVPSAIPQVMEVTGSESPSTFGWNRNNRARQDLSRARLRAIESSLENGQVWVPPSPAHRKSWEEEAHIERALHDHFLFRKLTDSQCQVLLDCMQRVEVIPGQIVVEQGGEGDCFYVVGSGEFEVLATQEESHGEVPRVLQHYTAEKLSSFGELALMYNKPLQASVRAVTSGTLWALKREDFRGILISEFSNLSSLKLLRSVDLLSKLTILQLSHIADCLSEVQFSDGELIVDGTEGSCALHIIQKGQVRITFDAELMSNSNVYSFNYVSQKEDGAAQSGNEISAIRKEGSYFGEWALLGERIGFLRAVAVGDVVCAILTKEKFESVVGPIPKLSQDDQKAKEHSSNSLHQSAKIIDISALSKVGLSDLEWKMCLYSTEYSEIGLVRLRNTETMLSLKRFTRQKVKRLGLEAQVLKEKNLMKTISSSACVPELLCTCFDQSHAGILLKTCLACPLSSILLVPLDESSARFFAASLIMALEDLHKLGVLHRGISPDVLMLDQTGHIQLVDFRFGKNTLGERTYTICGTADFLAPEIVQGNGHGFAADWWALGVLIHFMLKCEMPFGSWRQSELDTFSKIAKGQLSLPQIFSPEAIDLITKLLEVDEKKRLGNENQNSVRSHPWFDGVDWKGIHEGTFPVPETITSRVAQYLESYSENCSVSLTKPPQDLEEQEVPEWINDW* | 1083 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 21869986 | 21874971 | - | Chy2G041630.1 | Chy02g01896 | 221344 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy02g01896 | 1082 | SMART | cnmp_10 | 480 | 603 | IPR000595 | - | |
Chy02g01896 | 1082 | SMART | cnmp_10 | 606 | 745 | IPR000595 | - | |
Chy02g01896 | 1082 | SUPERFAMILY | cAMP-binding domain-like | 461 | 589 | IPR018490 | - | |
Chy02g01896 | 1082 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 606 | 732 | IPR000595 | - | |
Chy02g01896 | 1082 | SUPERFAMILY | PP2C-like | 83 | 387 | IPR036457 | - | |
Chy02g01896 | 1082 | Pfam | Protein phosphatase 2C | 122 | 363 | IPR001932 | - | |
Chy02g01896 | 1082 | Gene3D | Jelly Rolls | 449 | 588 | IPR014710 | - | |
Chy02g01896 | 1082 | CDD | CAP_ED | 480 | 588 | IPR000595 | - | |
Chy02g01896 | 1082 | Gene3D | Phosphorylase Kinase; domain 1 | 770 | 855 | - | - | |
Chy02g01896 | 1082 | MobiDBLite | consensus disorder prediction | 20 | 64 | - | - | |
Chy02g01896 | 1082 | ProSiteProfiles | PPM-type phosphatase domain profile. | 95 | 385 | IPR001932 | - | |
Chy02g01896 | 1082 | SUPERFAMILY | Protein kinase-like (PK-like) | 759 | 1057 | IPR011009 | - | |
Chy02g01896 | 1082 | SMART | PP2C_4 | 91 | 383 | IPR001932 | - | |
Chy02g01896 | 1082 | CDD | PP2Cc | 111 | 385 | IPR001932 | - | |
Chy02g01896 | 1082 | ProSiteProfiles | Protein kinase domain profile. | 771 | 1025 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy02g01896 | 1082 | Gene3D | - | 89 | 386 | IPR036457 | - | |
Chy02g01896 | 1082 | MobiDBLite | consensus disorder prediction | 50 | 64 | - | - | |
Chy02g01896 | 1082 | Pfam | Protein kinase domain | 782 | 1025 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy02g01896 | 1082 | CDD | CAP_ED | 606 | 738 | IPR000595 | - | |
Chy02g01896 | 1082 | SMART | serkin_6 | 778 | 1025 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy02g01896 | 1082 | Pfam | Cyclic nucleotide-binding domain | 500 | 588 | IPR000595 | - | |
Chy02g01896 | 1082 | PANTHER | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE | 22 | 1082 | - | - | |
Chy02g01896 | 1082 | Gene3D | Jelly Rolls | 595 | 752 | IPR014710 | - | |
Chy02g01896 | 1082 | PRINTS | cAMP-dependent protein kinase signature | 516 | 530 | - | - | |
Chy02g01896 | 1082 | PRINTS | cAMP-dependent protein kinase signature | 726 | 738 | - | - | |
Chy02g01896 | 1082 | PRINTS | cAMP-dependent protein kinase signature | 501 | 515 | - | - | |
Chy02g01896 | 1082 | PRINTS | cAMP-dependent protein kinase signature | 551 | 560 | - | - | |
Chy02g01896 | 1082 | PANTHER | PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN | 22 | 1082 | - | - | |
Chy02g01896 | 1082 | MobiDBLite | consensus disorder prediction | 20 | 43 | - | - | |
Chy02g01896 | 1082 | SUPERFAMILY | cAMP-binding domain-like | 599 | 737 | IPR018490 | - | |
Chy02g01896 | 1082 | ProSitePatterns | PPM-type phosphatase domain signature. | 131 | 139 | IPR000222 | GO:0043169 | |
Chy02g01896 | 1082 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 480 | 588 | IPR000595 | - | |
Chy02g01896 | 1082 | Gene3D | Transferase(Phosphotransferase) domain 1 | 856 | 1040 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g01896 | Chy-Chr2:21869986 | Chy06g00632 | Chy-Chr6:4288360 | 4.27E-138 | dispersed | |
Chy05g01064 | Chy-Chr5:15162792 | Chy02g01896 | Chy-Chr2:21869986 | 6.45E-29 | dispersed | |
Chy02g01896 | Chy-Chr2:21869986 | Chy11g01447 | Chy-Chr11:21275697 | 6.51E-140 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71082 | PF00069 | Pkinase | 3.60E-34 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy02g01896 | - | - | csv:101217861 | 2110.11 |