Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01896 ATGGGTTGCGTTTATTCGAGGGTTTGTATTGGCGAAGCTACAACTCCAAGATCTTCGAGAATTGCCGAAACCCAAAATGCCAAAACCGCCACTGAAATCGATACGATCTCTTCTTCGTCTTCCGATAGCCGAGAAGGTGAGACCGGCGACCGACTGAATCAATTGAATTCAAACAACAGAGATTCAGAAGCTGGAATCACGAGACTCTCGAGAGTTTCATCCCAGTTCTTGCCCGCCGAGGGGTCCCGAACCGTTAAAGTTCCTTCTGGAAACTTCGAACTGCGATATTCATTCCTTTCTCAAAGAGGGTATTATCCTGATGCCCTTGATAAGGCAAATCAAGACAGTTTTTGCATCCACACCCCATTTGGGAACAGCCCAGATGATCATTTCTTCGGGGTTTTCGATGGGCATGGGGAATACGGAGCACAGTGCTCGCAGTTTGTTAAACGGAAGCTCTGTGAAAATTTGCTTAGGAATAGTAGGTTCCACAGTGATGCAGTTGAGGCTTGTCATGCGGCCTATTTAACGACTAATTCACAGTTACACGCTGATATCTTGGATGATAGCATGAGTGGTACTACTGCTATTACTGTTTTAGTTAGAGGTAGGACTATATATGTTGCTAATTCAGGTGATTCGAGGGCAGTCATAGCAGAGCGGAGAGGAAAGGAAGTTGTGGCTGTTGACCTTTCGATTGACCAAACTCCATTTCGAACTGATGAACTCGAACGTGTTAAGCTTTGTGGTGCTAGAGTTCTTACACTTGATCAGATTGAGGGGCTGAAGAATCCTGATATTCAGCGCTGGGGTACTGAAGAAGGAGATGATGGTGATCCTCCTAGGCTTTGGGTGCCCAATGGGATGTACCCTGGCACTGCTTTTACAAGAAGTATTGGTGACTCAATTGCTGAGACTATTGGAGTCGTTGCTACACCTGAAATTGTTGTTCTGGAGCTGACACAGGATCATCCTTTCTTTGTTGTTGCTAGTGATGGGGTATTCGAGTTTCTTTCAAGCCAAACAGTGGTCGACATGGTTTGTAAATATAAAGATCCCCGTGATGCTTGTGCTGCAATTGTGGCTGAGTCTTACAGACTTTGGCTTCAATTTGAGACTCGAACGGATGATATCACTATTCTTGTGGTGCATATTAATGGGCTAACCAATACGGTTACTAGTGAATCGACAAGATCCGGTGGAGGAGGTTTTGTTCCATCTGCTATTCCTCAAGTCATGGAAGTGACAGGATCAGAGTCTCCCTCTACATTTGGCTGGAATAGAAACAATCGTGCAAGGCAAGATTTGTCAAGGGCGCGTCTCCGGGCCATCGAAAGTTCTCTAGAAAATGGTCAAGTCTGGGTACCTCCGTCTCCAGCTCACAGGAAGTCATGGGAAGAAGAAGCACATATTGAACGAGCATTGCACGATCATTTCCTCTTCAGAAAACTAACTGATTCTCAATGCCAAGTTTTATTGGATTGCATGCAAAGAGTTGAGGTCATCCCCGGGCAAATTGTAGTCGAACAAGGTGGCGAAGGTGACTGTTTTTACGTGGTTGGTAGTGGAGAATTTGAAGTCTTGGCAACCCAGGAAGAAAGCCATGGAGAGGTCCCTAGGGTTTTACAACACTACACAGCGGAGAAGCTCTCTTCCTTTGGCGAATTGGCTTTGATGTATAACAAACCACTTCAAGCCTCTGTACGTGCAGTGACAAGTGGGACACTTTGGGCTTTGAAAAGAGAGGACTTTCGTGGAATTCTTATATCAGAATTTTCTAACTTGTCATCTTTGAAATTGCTTCGATCTGTGGACCTCTTGTCGAAGTTAACAATCTTGCAATTGAGTCACATTGCAGACTGCCTTTCTGAAGTTCAATTCTCAGATGGGGAGCTGATTGTTGATGGGACTGAAGGCTCATGTGCACTGCACATTATTCAGAAGGGGCAAGTGAGGATTACTTTTGATGCAGAGTTAATGAGCAATTCAAATGTTTACAGCTTCAATTATGTAAGTCAAAAAGAGGATGGTGCTGCACAGAGTGGTAACGAGATTTCAGCTATTAGGAAAGAGGGAAGTTATTTTGGCGAGTGGGCACTTCTTGGTGAGCGTATCGGCTTCTTACGTGCAGTTGCTGTGGGAGATGTTGTGTGTGCTATTTTAACAAAGGAAAAGTTCGAATCAGTTGTTGGCCCCATACCAAAGCTCTCCCAAGATGATCAAAAGGCGAAAGAACACTCTTCAAACTCTCTCCATCAGTCTGCCAAAATTATTGATATTTCAGCTCTTTCTAAAGTTGGGCTCTCCGATCTGGAGTGGAAAATGTGTTTATATTCCACGGAATACAGTGAAATTGGGCTAGTTCGGTTAAGGAACACAGAAACTATGCTTAGTTTAAAAAGGTTTACAAGACAGAAGGTCAAAAGGCTGGGACTTGAAGCACAAGTTTTGAAGGAGAAAAATCTTATGAAGACCATTAGTTCTTCAGCTTGTGTTCCGGAACTTCTCTGCACTTGTTTTGATCAATCACATGCTGGCATATTGCTAAAGACATGCCTGGCTTGCCCTTTGTCTTCGATACTTCTCGTCCCACTAGATGAATCTTCTGCACGTTTCTTTGCAGCCTCTCTTATTATGGCACTGGAGGATTTGCACAAGCTTGGTGTTCTCCACAGAGGAATTTCCCCTGATGTTCTAATGTTGGATCAAACCGGACACATACAGTTGGTAGACTTCAGATTTGGGAAAAACACTTTGGGTGAGAGAACATATACTATTTGCGGGACGGCCGACTTTTTAGCACCTGAGATAGTTCAAGGCAATGGTCATGGCTTTGCTGCTGACTGGTGGGCACTGGGAGTTTTAATCCATTTCATGCTGAAATGTGAAATGCCATTTGGATCGTGGCGACAAAGCGAGCTTGATACTTTTTCGAAGATTGCAAAAGGTCAACTAAGTCTTCCCCAGATTTTCAGTCCTGAAGCAATCGATCTCATCACCAAGTTACTTGAAGTCGATGAGAAGAAAAGACTTGGAAACGAGAACCAAAACTCTGTTAGAAGTCATCCATGGTTTGATGGCGTTGATTGGAAGGGGATCCATGAGGGTACCTTTCCTGTTCCTGAAACAATAACTTCTCGTGTAGCTCAATATTTGGAGAGCTACTCTGAAAATTGCAGTGTTTCTTTAACTAAACCACCTCAAGATCTTGAAGAACAGGAAGTCCCTGAGTGGATCAACGACTGGTAG 3249 44.01 MGCVYSRVCIGEATTPRSSRIAETQNAKTATEIDTISSSSSDSREGETGDRLNQLNSNNRDSEAGITRLSRVSSQFLPAEGSRTVKVPSGNFELRYSFLSQRGYYPDALDKANQDSFCIHTPFGNSPDDHFFGVFDGHGEYGAQCSQFVKRKLCENLLRNSRFHSDAVEACHAAYLTTNSQLHADILDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAERRGKEVVAVDLSIDQTPFRTDELERVKLCGARVLTLDQIEGLKNPDIQRWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVATPEIVVLELTQDHPFFVVASDGVFEFLSSQTVVDMVCKYKDPRDACAAIVAESYRLWLQFETRTDDITILVVHINGLTNTVTSESTRSGGGGFVPSAIPQVMEVTGSESPSTFGWNRNNRARQDLSRARLRAIESSLENGQVWVPPSPAHRKSWEEEAHIERALHDHFLFRKLTDSQCQVLLDCMQRVEVIPGQIVVEQGGEGDCFYVVGSGEFEVLATQEESHGEVPRVLQHYTAEKLSSFGELALMYNKPLQASVRAVTSGTLWALKREDFRGILISEFSNLSSLKLLRSVDLLSKLTILQLSHIADCLSEVQFSDGELIVDGTEGSCALHIIQKGQVRITFDAELMSNSNVYSFNYVSQKEDGAAQSGNEISAIRKEGSYFGEWALLGERIGFLRAVAVGDVVCAILTKEKFESVVGPIPKLSQDDQKAKEHSSNSLHQSAKIIDISALSKVGLSDLEWKMCLYSTEYSEIGLVRLRNTETMLSLKRFTRQKVKRLGLEAQVLKEKNLMKTISSSACVPELLCTCFDQSHAGILLKTCLACPLSSILLVPLDESSARFFAASLIMALEDLHKLGVLHRGISPDVLMLDQTGHIQLVDFRFGKNTLGERTYTICGTADFLAPEIVQGNGHGFAADWWALGVLIHFMLKCEMPFGSWRQSELDTFSKIAKGQLSLPQIFSPEAIDLITKLLEVDEKKRLGNENQNSVRSHPWFDGVDWKGIHEGTFPVPETITSRVAQYLESYSENCSVSLTKPPQDLEEQEVPEWINDW* 1083
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 21869986 21874971 - Chy2G041630.1 Chy02g01896 221344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01896 1082 SMART cnmp_10 480 603 IPR000595 -
Chy02g01896 1082 SMART cnmp_10 606 745 IPR000595 -
Chy02g01896 1082 SUPERFAMILY cAMP-binding domain-like 461 589 IPR018490 -
Chy02g01896 1082 ProSiteProfiles cAMP/cGMP binding motif profile. 606 732 IPR000595 -
Chy02g01896 1082 SUPERFAMILY PP2C-like 83 387 IPR036457 -
Chy02g01896 1082 Pfam Protein phosphatase 2C 122 363 IPR001932 -
Chy02g01896 1082 Gene3D Jelly Rolls 449 588 IPR014710 -
Chy02g01896 1082 CDD CAP_ED 480 588 IPR000595 -
Chy02g01896 1082 Gene3D Phosphorylase Kinase; domain 1 770 855 - -
Chy02g01896 1082 MobiDBLite consensus disorder prediction 20 64 - -
Chy02g01896 1082 ProSiteProfiles PPM-type phosphatase domain profile. 95 385 IPR001932 -
Chy02g01896 1082 SUPERFAMILY Protein kinase-like (PK-like) 759 1057 IPR011009 -
Chy02g01896 1082 SMART PP2C_4 91 383 IPR001932 -
Chy02g01896 1082 CDD PP2Cc 111 385 IPR001932 -
Chy02g01896 1082 ProSiteProfiles Protein kinase domain profile. 771 1025 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01896 1082 Gene3D - 89 386 IPR036457 -
Chy02g01896 1082 MobiDBLite consensus disorder prediction 50 64 - -
Chy02g01896 1082 Pfam Protein kinase domain 782 1025 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01896 1082 CDD CAP_ED 606 738 IPR000595 -
Chy02g01896 1082 SMART serkin_6 778 1025 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01896 1082 Pfam Cyclic nucleotide-binding domain 500 588 IPR000595 -
Chy02g01896 1082 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 22 1082 - -
Chy02g01896 1082 Gene3D Jelly Rolls 595 752 IPR014710 -
Chy02g01896 1082 PRINTS cAMP-dependent protein kinase signature 516 530 - -
Chy02g01896 1082 PRINTS cAMP-dependent protein kinase signature 726 738 - -
Chy02g01896 1082 PRINTS cAMP-dependent protein kinase signature 501 515 - -
Chy02g01896 1082 PRINTS cAMP-dependent protein kinase signature 551 560 - -
Chy02g01896 1082 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 22 1082 - -
Chy02g01896 1082 MobiDBLite consensus disorder prediction 20 43 - -
Chy02g01896 1082 SUPERFAMILY cAMP-binding domain-like 599 737 IPR018490 -
Chy02g01896 1082 ProSitePatterns PPM-type phosphatase domain signature. 131 139 IPR000222 GO:0043169
Chy02g01896 1082 ProSiteProfiles cAMP/cGMP binding motif profile. 480 588 IPR000595 -
Chy02g01896 1082 Gene3D Transferase(Phosphotransferase) domain 1 856 1040 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01896 Chy-Chr2:21869986 Chy06g00632 Chy-Chr6:4288360 4.27E-138 dispersed
Chy05g01064 Chy-Chr5:15162792 Chy02g01896 Chy-Chr2:21869986 6.45E-29 dispersed
Chy02g01896 Chy-Chr2:21869986 Chy11g01447 Chy-Chr11:21275697 6.51E-140 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71082 PF00069 Pkinase 3.60E-34 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01896 - - csv:101217861 2110.11