Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01907 ATGAATCCCAAATCCCATTTCAACTCACTTTTCCTCTTCTCCCTCCTCCTTCTCCACCTCTTCGCCGCCCATGGCAGCCTCTCTGACGCTGAAGCTCTCTTCATCCGCCACCGCCAGCTTCTTTACTACAGAGACGAGTTCGGCGACCGTGGCGAACTAGTCACTGTCGACCCTTCTCTTGTCTTTGAAAATGACAGAATTAGAAATGCTTACATTGCACTTCAAGCTTGGAAACTAGCCATTTTATCGGACCCTCTGAATCAAACCGCCAACTGGGTCGGATCTAATGTCTGTAACTACTTCGGCGTTTTCTGTGCTCCATCATTGGACAACCCCAAAATCCGTACCGTCGCCGGTATCGATCTCAACCACGGCGACATTGCTGGATACCTCCCTGAAGAGCTCGGTTTGCTTACTGATCTTGCATTGTTCCATATCAACTCTAACAGATTCTGCGGTACTCTTCCCCACAGATTTGACCGTCTCAAGTTGCTTTATGAATTAGATCTCAGTAATAACCGGTTTGCCGGTAAGTTTCCCGACGTTGTTCTCAAGCTTCCGACGCTCAAGTTCTTGGATCTGAGGTTTAATGAATTTGAAGGGAATGTACCCAGAGAGCTGTTTGATAAGGATTTGGACGCCATTTTTATTAACCATAACAGGTTTAGATTTGAGTTGCCGGATAATTTTGGGAACTCGCCGGTGTCGGTGATTGTTCTTGCGAACAATAAGTTTCATGGGTGTCTGCCTTCGAGCTTGGGGAATATGACGAGGTTGAATGAGATTATTATGATGAATAATGGGCTTAATTCTTGCTTACCGCCGGAAATTGGGGCGTTGAAGAATTTGACGGTGTTTGATGTTAGTTCGAATGAGTTGGTGGGGCCGTTGCCGGAGACTTTTGGAGGGCTTGTGAGTTTGGAGCAACTTAACGTGGCGAATAATTTTCTTTCAGGGAAGATTCCGGAGAGTATTTGTGAGTTGCCTAAGCTTCAAAACTTTACGTTCTCGAATAACTTCTTCTCCGGTGAGCCACCCACGTGTTTGAGGGTTCCGGATTTCAGTGATCGGAGGAATTGTTTGGCTGGACGGCCGGGGCAGCGGTCGACTGGGCAATGTAATGCGTTCTTGTCGAGACCTGTTGATTGTAATGCGTTTAAATGTGGTGGTTCATCTTCTGGTTCGCCTTCTACTCCATTTACTCCGCCGGTGGTTTCGCCGTCTTCGCCTCCGTCACCAGCAGGTACGGTGTCTCCTCCATCGTCGTCTCATTCTCCCAATGCACCATCGGCCCCGCCACTCTCGCCCCATTTTCCTCCTCTGTCGCCACATTCACCACCGTCGCCGCCTTCTTCTCCATCTACGCCGTCGCAGCCGTCAGCACCGCCTTCTTCTCCATCGACCCCTTCCTCGCCGCCGCAATTTCCCTCTCCAACTGCACCGTCGCCTTCATCTCCACCTAAAGGTCATGCTCCCCCGTCATTGCCATCACCTTCATCACCCCCACAAGATCATACTCCGCCATCTGAGCCTTCGCCTTCATCACCACCCCAAGATCACACTCCGCCAGGTCCACCTTCGTCCGAGCCCACCCCACCATTGCCGCCACAAGGTCACAGTCCACCAGCATCTCCTTCGCCGTTCAAGCCCTCCCCTTCATCCCCGCCACAAGGTCACACTCCTACTGTTCCTCCTTCGCCTTCCGAACCATCACCGCCTCAAGGGAACAATCCGCCAGCGGAGCCTTCTCCTCCAGGAACATCATCACCACCATTCCCAGTTTACAGTCCGCCTCCGCCACCGCCACATTTCCCAGATTTTCCCTCGCCACCATCTACACAACCTCCGGTCTACTGCCCACGATCCCCATATCCACCATCTCCTCCATCCTTCTCCCCAAACCCACCTCTCACTCACCCCAACTCCCCTCCACTGCCATCACCGCCGGTACCTGTTCATTCTCCCCCTCCCCCTCTTCATACAACCCCATCGCCGCTTCCTCTTCCTTGCATTCAACCTCCTCCACCAAATGTTCAATATCCAGAACCGCCACCCTCTCCTTCACCAACCCCGTCATCTCCAATTCACTACAATACCCCACCACCGCCGGTCCATTACCAAACTCCTCCCTCACCTTCACCACCCGTCCACATATATCCGCCGCCATCTCCAACGCCCCCTCCTCCAATAGTTTACGAAAACCCGCCACCGCCCGTTGTCTACCAAAGCCCACCGCCGCCTCCAACTCCAGTATACGGAGGCCCACTGCCACCAATCTACGGAGTTCCGTACGCCTCTCCTCCTCCACCACCCTTCTATTAG 2322 52.67 MNPKSHFNSLFLFSLLLLHLFAAHGSLSDAEALFIRHRQLLYYRDEFGDRGELVTVDPSLVFENDRIRNAYIALQAWKLAILSDPLNQTANWVGSNVCNYFGVFCAPSLDNPKIRTVAGIDLNHGDIAGYLPEELGLLTDLALFHINSNRFCGTLPHRFDRLKLLYELDLSNNRFAGKFPDVVLKLPTLKFLDLRFNEFEGNVPRELFDKDLDAIFINHNRFRFELPDNFGNSPVSVIVLANNKFHGCLPSSLGNMTRLNEIIMMNNGLNSCLPPEIGALKNLTVFDVSSNELVGPLPETFGGLVSLEQLNVANNFLSGKIPESICELPKLQNFTFSNNFFSGEPPTCLRVPDFSDRRNCLAGRPGQRSTGQCNAFLSRPVDCNAFKCGGSSSGSPSTPFTPPVVSPSSPPSPAGTVSPPSSSHSPNAPSAPPLSPHFPPLSPHSPPSPPSSPSTPSQPSAPPSSPSTPSSPPQFPSPTAPSPSSPPKGHAPPSLPSPSSPPQDHTPPSEPSPSSPPQDHTPPGPPSSEPTPPLPPQGHSPPASPSPFKPSPSSPPQGHTPTVPPSPSEPSPPQGNNPPAEPSPPGTSSPPFPVYSPPPPPPHFPDFPSPPSTQPPVYCPRSPYPPSPPSFSPNPPLTHPNSPPLPSPPVPVHSPPPPLHTTPSPLPLPCIQPPPPNVQYPEPPPSPSPTPSSPIHYNTPPPPVHYQTPPSPSPPVHIYPPPSPTPPPPIVYENPPPPVVYQSPPPPPTPVYGGPLPPIYGVPYASPPPPPFY* 774
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22139730 22142051 - Chy2G041740.1 Chy02g01907 221355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01907 773 MobiDBLite consensus disorder prediction 390 752 - -
Chy02g01907 773 Pfam Leucine rich repeat 282 339 IPR001611 GO:0005515
Chy02g01907 773 MobiDBLite consensus disorder prediction 425 752 - -
Chy02g01907 773 PRINTS Proline rich extensin signature 413 429 - -
Chy02g01907 773 PRINTS Proline rich extensin signature 439 456 - -
Chy02g01907 773 PRINTS Proline rich extensin signature 462 487 - -
Chy02g01907 773 PRINTS Proline rich extensin signature 391 412 - -
Chy02g01907 773 Gene3D Ribonuclease Inhibitor 234 361 IPR032675 -
Chy02g01907 773 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 14 472 - -
Chy02g01907 773 MobiDBLite consensus disorder prediction 400 417 - -
Chy02g01907 773 Gene3D Ribonuclease Inhibitor 70 233 IPR032675 -
Chy02g01907 773 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 14 472 - -
Chy02g01907 773 SUPERFAMILY L domain-like 79 350 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01907 Chy-Chr2:22139730 Chy05g01360 Chy-Chr5:17717964 0 dispersed
Chy11g01657 Chy-Chr11:23038201 Chy02g01907 Chy-Chr2:22139730 3.47E-140 dispersed
Chy02g01907 Chy-Chr2:22139730 Chy02g01174 Chy-Chr2:8415487 3.09E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01907 - - csv:101220934 886.715